Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Sed14g1623 | ATGCAAGGGATTAGCGATGGATCTCATCTAGTACAAGGCAAGATGAATCATGGAATGGAGGACTATATTGTTGCCGAAGAGCGACGTGTCGATGACCACACGCTGGGACTATTCGCAATATTCGATGGCCACTCCGGTCGCAATGTTGCAGAGTACTTGCAGAGCCATCTGTTTGATAACATATTAAACCAGACTGATTTCTGGGAAGACCCTGTAGGAGCAATTAGAAGTGCATATAAAGCAACAGATGATGAGATTTTGGCTAGAAAAGTAAGGAGGAGTGGAGGCTCAACGGCAGTCACTGCTATACTGATTGATGGACTGACGCTAATTGTCGCAAACATTGGCGATTCACGGGCAGTGATATGCAGGAATTGCTCGGCAAGACCGATTACAGTCGATCACGATGTGGAGAGGGAGAAGGAGCTTGTTGAGAGGAGAGGTGGATTTGTTGTACAAATGCCAGGAAGTGTGCCACGTGTGGATGGTCAGCTTGCAATGTCAAGGGCATTTGGTGATGCAAAGCTCAAAGAACACATTACTTCAGAACCAGATATCAGAATCCTAACAATTGATAATAAGACTGAGTTCATCATTTTGGCCAGTGATGGCCTCTGGAAGGTGATGTCAAACCATGAAGCTTGTGAATGCATCAGAGAATTGGCTATGGATGCATTGTCCAAGAAGAGCTACGATGACATCTCCTGCATTGTTATCACCTTCCACAGAACATCTCCACTACACTTTCTATTTTCAGAGTAA | 762 | 44.88 | MQGISDGSHLVQGKMNHGMEDYIVAEERRVDDHTLGLFAIFDGHSGRNVAEYLQSHLFDNILNQTDFWEDPVGAIRSAYKATDDEILARKVRRSGGSTAVTAILIDGLTLIVANIGDSRAVICRNCSARPITVDHDVEREKELVERRGGFVVQMPGSVPRVDGQLAMSRAFGDAKLKEHITSEPDIRILTIDNKTEFIILASDGLWKVMSNHEACECIRELAMDALSKKSYDDISCIVITFHRTSPLHFLFSE | 253 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
14 | 24410889 | 24412736 | - | Sed0016346.1 | Sed14g1623 | 737341 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Sed14g1623 | 253 | Gene3D | - | 5 | 247 | IPR036457 | - | |
Sed14g1623 | 253 | PANTHER | PROTEIN PHOSPHATASE | 7 | 239 | IPR015655 | GO:0004722(InterPro)|GO:0004722(PANTHER)|GO:0006470(InterPro)|GO:0035970(PANTHER) | |
Sed14g1623 | 253 | ProSiteProfiles | PPM-type phosphatase domain profile. | 5 | 241 | IPR001932 | - | |
Sed14g1623 | 253 | Pfam | Protein phosphatase 2C | 16 | 224 | IPR001932 | - | |
Sed14g1623 | 253 | SUPERFAMILY | PP2C-like | 7 | 242 | IPR036457 | - | |
Sed14g1623 | 253 | SMART | PP2C_4 | 1 | 239 | IPR001932 | - | |
Sed14g1623 | 253 | CDD | PP2Cc | 7 | 241 | IPR001932 | - | |
Sed14g1623 | 253 | FunFam | Probable protein phosphatase 2C 39 | 1 | 242 | - | - | |
Sed14g1623 | 253 | SMART | PP2C_SIG_2 | 20 | 241 | IPR001932 | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Sed13g2131 | Sed-Chr13:25963283 | Sed14g1623 | Sed-Chr14:24410889 | 2.80E-65 | dispersed | |
Sed13g2132 | Sed-Chr13:25963283 | Sed14g1623 | Sed-Chr14:24410889 | 9.40E-62 | dispersed | |
Sed14g1623 | Sed-Chr14:24410889 | Sed12g1168 | Sed-Chr12:7766902 | 1.00E-21 | dispersed | |
Sed14g1623 | Sed-Chr14:24410889 | Sed04g2407 | Sed-Chr4:37377669 | 4.10E-79 | transposed |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Sed14g1623 | K14803 | - | csv:101211141 | 401.364 |