Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sed14g1623 ATGCAAGGGATTAGCGATGGATCTCATCTAGTACAAGGCAAGATGAATCATGGAATGGAGGACTATATTGTTGCCGAAGAGCGACGTGTCGATGACCACACGCTGGGACTATTCGCAATATTCGATGGCCACTCCGGTCGCAATGTTGCAGAGTACTTGCAGAGCCATCTGTTTGATAACATATTAAACCAGACTGATTTCTGGGAAGACCCTGTAGGAGCAATTAGAAGTGCATATAAAGCAACAGATGATGAGATTTTGGCTAGAAAAGTAAGGAGGAGTGGAGGCTCAACGGCAGTCACTGCTATACTGATTGATGGACTGACGCTAATTGTCGCAAACATTGGCGATTCACGGGCAGTGATATGCAGGAATTGCTCGGCAAGACCGATTACAGTCGATCACGATGTGGAGAGGGAGAAGGAGCTTGTTGAGAGGAGAGGTGGATTTGTTGTACAAATGCCAGGAAGTGTGCCACGTGTGGATGGTCAGCTTGCAATGTCAAGGGCATTTGGTGATGCAAAGCTCAAAGAACACATTACTTCAGAACCAGATATCAGAATCCTAACAATTGATAATAAGACTGAGTTCATCATTTTGGCCAGTGATGGCCTCTGGAAGGTGATGTCAAACCATGAAGCTTGTGAATGCATCAGAGAATTGGCTATGGATGCATTGTCCAAGAAGAGCTACGATGACATCTCCTGCATTGTTATCACCTTCCACAGAACATCTCCACTACACTTTCTATTTTCAGAGTAA 762 44.88 MQGISDGSHLVQGKMNHGMEDYIVAEERRVDDHTLGLFAIFDGHSGRNVAEYLQSHLFDNILNQTDFWEDPVGAIRSAYKATDDEILARKVRRSGGSTAVTAILIDGLTLIVANIGDSRAVICRNCSARPITVDHDVEREKELVERRGGFVVQMPGSVPRVDGQLAMSRAFGDAKLKEHITSEPDIRILTIDNKTEFIILASDGLWKVMSNHEACECIRELAMDALSKKSYDDISCIVITFHRTSPLHFLFSE 253
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
14 24410889 24412736 - Sed0016346.1 Sed14g1623 737341
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sed14g1623 253 Gene3D - 5 247 IPR036457 -
Sed14g1623 253 PANTHER PROTEIN PHOSPHATASE 7 239 IPR015655 GO:0004722(InterPro)|GO:0004722(PANTHER)|GO:0006470(InterPro)|GO:0035970(PANTHER)
Sed14g1623 253 ProSiteProfiles PPM-type phosphatase domain profile. 5 241 IPR001932 -
Sed14g1623 253 Pfam Protein phosphatase 2C 16 224 IPR001932 -
Sed14g1623 253 SUPERFAMILY PP2C-like 7 242 IPR036457 -
Sed14g1623 253 SMART PP2C_4 1 239 IPR001932 -
Sed14g1623 253 CDD PP2Cc 7 241 IPR001932 -
Sed14g1623 253 FunFam Probable protein phosphatase 2C 39 1 242 - -
Sed14g1623 253 SMART PP2C_SIG_2 20 241 IPR001932 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Sed13g2131 Sed-Chr13:25963283 Sed14g1623 Sed-Chr14:24410889 2.80E-65 dispersed
Sed13g2132 Sed-Chr13:25963283 Sed14g1623 Sed-Chr14:24410889 9.40E-62 dispersed
Sed14g1623 Sed-Chr14:24410889 Sed12g1168 Sed-Chr12:7766902 1.00E-21 dispersed
Sed14g1623 Sed-Chr14:24410889 Sed04g2407 Sed-Chr4:37377669 4.10E-79 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sed14g1623 K14803 - csv:101211141 401.364