Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sed14g1639 ATGGCGCCCGGCCTCAGAGACCTGCAGCTCACCCAGGTCGCCGACCGCCGCACGCCGGCTGCTTCCGCGGCCGATGAACTCTCCGACGATCTCGAGGATGTGCGGCTGCTTGATTCCTACGAGCGCCCGGAGGAGAATTTGGCTGAAGTTGGTGGAGATTTGAGGAGGATTCAGGTCGGAGTTTCTGGAATGACCTGTGCTGCTTGTTCTAATTCCGTAGAAGCTGCTCTCAGGGGCGTTAATGGCGTTTTGATGGCTTCCGTTGCGTTGCTTCAGAATAGAGCCGACGTGGTTTTTGACCCTAACTTGGTTAAGGTTAATGACATCAAGGAAGCGATAGAAGATGCTGGATTTGATGCTGAGATTATACCTGAAACTGAAACCAGTTCAGCTGGAAAGAAGTCGTATGGAACGCTGGTGGGTCAATTTACTATAGGAGGTATGACATGTGCAGCATGTGTAAATTCAGTAGAAGGAATTTTAAAAGATCTCCCTGGTGTTAGAAGAGCAGTAGTTTCTTTGGCCACTTCATTGGGGGAAGTTGAATACGATTCAACTATAACCAGCAAAGACGACATTGTAAATGCAGTTGAGGATGCTGGATTTGAAGCTTCATTTGTACAGAGCAGTGAGCAAGATAAAATTTTACTAGCGGTTACAGGCATTGCTGGCGAGGTTGATGTAGAGTTTTTGGAAGTCATACTCAGTAACTTGAAAGGGGTGAGACGGTTTCTCTTTAACAGGGCATCAGGAAAACTTGAAGTTGTTTTCGACCCGGAAGTTGTTGGTCCCAGATCCTTAGTGGATGAGATTGAGGGAAGAAGCAAAAGAAAATTTAAGCTGCATGTTACGAGCCCTTACACGAGGTTAACATCTAAAGATGTTGAAGAAGCTACTAACATGTTTCGGCTTTTTACCTCCAGTCTGTTTCTCAGTGTGCTGATCTTTCTCCAACGAGTAGTATGTCCTCATATTCCTTTAATCTACTCATTGTTACTCTGGCGCTGTGGGCCTTTCATCATGGATGATTGGTTAAAGTGGGCCTTGGTGACTGTTGTGCAATTTATCATTGGAAAACGCTTTTATGTGGCAGCTGCTAGAGCTCTTCGTAACGGTTCAACTAACATGGATGTCTTGGTTGCTTTGGGTACCACGGCATCTTACGTCTATTCTGTTTGTGCACTTCTCTATGGGGCAGTCACTGGATTCTGGTCTCCTACTTATTTTGAAACAAGTGCTATGCTGATAACCTTTGTATTACTGGGAAAGTATTTGGAGTGTCTTGCCAAGGGGAAAACTTCAGATGCCATCAAGAAGTTGGTTGAACTTGCTCCTGCAACTGCCCTATTGCTTGTCCGAGATAAAGGTGGAAATTTGATAGAAGAAAGGGAAATAGATGCCTTGTTAATTCAACCTGGCGACGTGTTGAAAGTTCTTCCTGGTGCAAAGATTCCAGCGGATGGCATTGTTGTTTGGGGTTCAAGTTATGTTAATGAGAGTATGGTTACTGGAGAATCTATACCTGTTTTGAAGGAGGCCAACTCACACGTAATTGGGGGTACAATTAATTTTCATGGAGCCCTTCACATTCAAGCAACTAAAGTAGGATCTGATGCAGTTTTGAACCAGATTATTAGTTTGGTCGAGACAGCGCAGATGTCTAAAGCCCCAATTCAGAAATTTGCTGATTTTGTAGCTAGCATATTCGTTCCAACAGTTGTTGCTATGGCATTGTGTACATTATTTGGTTGGTACGTTGGAGGAATTCTTGGAGCTTATCCAGCTGAATGGCTACCAGAAAATGGAAATTACTTTGTATTCTCCCTCATGTTTGCGATATCTGTGGTAGTGATTTCATGTCCTTGTGCACTAGGCTTGGCCACACCGACGGCTGTCATGGTTGCCACTGGGGTTGGTGCTAACAATGGTGTCTTGATCAAAGGAGGTGATGCTTTGGAGATGGCCCAAAAGGTTAAGTACGTGATATTTGATAAAACAGGCACACTAACCCAAGGGAAAGCGACTGTTACCACTCCCAAAGTCTTCACTGAAATTTCTCGAGGAGATTTTCTTAAGCTGGTTGCTTCAGCAGAGGCTAGCAGCGAACACCCATTGGGAAAAGCTATAGTCGAGTATGCGCGTCATTTTCATTTCTTCGATGAACCTTCCACGACCAAAAATGGGGAAAACCAAAGTAAAGAATCTTCTGGATGGCTGTTTGACGTCACAGATTTCTCTGCATTGCCAGGCAAAGGAGTTCAGTGCTTTATAGAGGGAAAAAGGGTTCTTGTTGGCAACAGGACGTTGATGAATGAAAATGGAATCTCCATAGCACCTCATGTAGATAATTTTGTCATAGAGCTAGAAGAATGTGCAAATACTGGTGTTCTTGTGTCATGTGATGACAACTTAATTGGAGTGTTGGGAATAGCAGATCCACTGAAGAGAGAAGCCGCAGTTGTTGTTGAGGGTCTCATAAAAATGGGAGTTTCCCCAGTCATGGTTACAGGGGATAATTGGAGAACGGCTCAGGCTGTTGCAAAAGAGCTTGGTGTAAAGGATGTGAGGGCAGAAGTAATGCCAGCAGGAAAAGCGGAAGTCATTCAAAACTTCCAAAAGGATGGAAGCATAGTTGCAATGGTTGGTGATGGCATCAATGACTCGCCTGCTCTAGCTGCTTCTGATATCGGAATCGCAATTGGTGCGGGGACTGATATCGCCATTGAGGCAGCTGACTTTGTCTTGATGAGAAATAATTTAGAAGACGTGATTACAGCCATCGATCTCTCAAGGAAGACGTTCGACCGGATTCGATTGAATTACGTGTTTGCAATGGCCTACAATGTGATAGCAATTCCTGTTGCTGCTGGAGTATTATTTCCCTCTTTGGGGGTTAAATTGCCTCCATGGGCGGCCGGTGCATGCATGGCTTTATCATCCGTAAGCGTCGTTTGCTCTTCTTTACTTCTTAGGAGATATAAACGGCCAAGGCTTACAACAATACTCGAAATAACTGTAGAATAG 3024 44.51 MAPGLRDLQLTQVADRRTPAASAADELSDDLEDVRLLDSYERPEENLAEVGGDLRRIQVGVSGMTCAACSNSVEAALRGVNGVLMASVALLQNRADVVFDPNLVKVNDIKEAIEDAGFDAEIIPETETSSAGKKSYGTLVGQFTIGGMTCAACVNSVEGILKDLPGVRRAVVSLATSLGEVEYDSTITSKDDIVNAVEDAGFEASFVQSSEQDKILLAVTGIAGEVDVEFLEVILSNLKGVRRFLFNRASGKLEVVFDPEVVGPRSLVDEIEGRSKRKFKLHVTSPYTRLTSKDVEEATNMFRLFTSSLFLSVLIFLQRVVCPHIPLIYSLLLWRCGPFIMDDWLKWALVTVVQFIIGKRFYVAAARALRNGSTNMDVLVALGTTASYVYSVCALLYGAVTGFWSPTYFETSAMLITFVLLGKYLECLAKGKTSDAIKKLVELAPATALLLVRDKGGNLIEEREIDALLIQPGDVLKVLPGAKIPADGIVVWGSSYVNESMVTGESIPVLKEANSHVIGGTINFHGALHIQATKVGSDAVLNQIISLVETAQMSKAPIQKFADFVASIFVPTVVAMALCTLFGWYVGGILGAYPAEWLPENGNYFVFSLMFAISVVVISCPCALGLATPTAVMVATGVGANNGVLIKGGDALEMAQKVKYVIFDKTGTLTQGKATVTTPKVFTEISRGDFLKLVASAEASSEHPLGKAIVEYARHFHFFDEPSTTKNGENQSKESSGWLFDVTDFSALPGKGVQCFIEGKRVLVGNRTLMNENGISIAPHVDNFVIELEECANTGVLVSCDDNLIGVLGIADPLKREAAVVVEGLIKMGVSPVMVTGDNWRTAQAVAKELGVKDVRAEVMPAGKAEVIQNFQKDGSIVAMVGDGINDSPALAASDIGIAIGAGTDIAIEAADFVLMRNNLEDVITAIDLSRKTFDRIRLNYVFAMAYNVIAIPVAAGVLFPSLGVKLPPWAAGACMALSSVSVVCSSLLLRRYKRPRLTTILEITVE 1007
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
14 24568967 24574954 + Sed0022590.1 Sed14g1639 737357
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sed14g1639 1007 Gene3D - 141 206 - -
Sed14g1639 1007 SUPERFAMILY HAD-like 661 987 IPR036412 -
Sed14g1639 1007 ProSiteProfiles Heavy-metal-associated domain profile. 55 121 IPR006121 GO:0046872(InterPro)
Sed14g1639 1007 SUPERFAMILY Calcium ATPase, transduction domain A 462 548 IPR008250 -
Sed14g1639 1007 SUPERFAMILY HMA, heavy metal-associated domain 52 125 IPR036163 GO:0046872(InterPro)
Sed14g1639 1007 SUPERFAMILY HMA, heavy metal-associated domain 142 210 IPR036163 GO:0046872(InterPro)
Sed14g1639 1007 SUPERFAMILY HMA, heavy metal-associated domain 210 274 IPR036163 GO:0046872(InterPro)
Sed14g1639 1007 NCBIfam heavy metal translocating P-type ATPase 376 990 IPR027256 GO:0006812(InterPro)|GO:0016020(InterPro)|GO:0019829(InterPro)
Sed14g1639 1007 ProSitePatterns Heavy-metal-associated domain. 145 174 IPR017969 GO:0046872(InterPro)
Sed14g1639 1007 ProSitePatterns Heavy-metal-associated domain. 61 91 IPR017969 GO:0046872(InterPro)
Sed14g1639 1007 ProSiteProfiles Heavy-metal-associated domain profile. 213 279 IPR006121 GO:0046872(InterPro)
Sed14g1639 1007 FunFam Copper-exporting P-type ATPase A 53 123 - -
Sed14g1639 1007 ProSiteProfiles Heavy-metal-associated domain profile. 139 205 IPR006121 GO:0046872(InterPro)
Sed14g1639 1007 Pfam haloacid dehalogenase-like hydrolase 658 894 - -
Sed14g1639 1007 Gene3D - 761 812 IPR023299 GO:0000166(InterPro)
Sed14g1639 1007 Gene3D - 669 760 IPR023299 GO:0000166(InterPro)
Sed14g1639 1007 Pfam Heavy-metal-associated domain 143 203 IPR006121 GO:0046872(InterPro)
Sed14g1639 1007 Pfam Heavy-metal-associated domain 61 119 IPR006121 GO:0046872(InterPro)
Sed14g1639 1007 CDD HMA 142 205 IPR006121 GO:0046872(InterPro)
Sed14g1639 1007 PRINTS H+-transporting ATPase (proton pump) signature 912 937 IPR001757 GO:0005215(InterPro)|GO:0005524(InterPro)|GO:0016020(InterPro)|GO:0016887(InterPro)
Sed14g1639 1007 PRINTS H+-transporting ATPase (proton pump) signature 881 897 IPR001757 GO:0005215(InterPro)|GO:0005524(InterPro)|GO:0016020(InterPro)|GO:0016887(InterPro)
Sed14g1639 1007 PRINTS H+-transporting ATPase (proton pump) signature 853 869 IPR001757 GO:0005215(InterPro)|GO:0005524(InterPro)|GO:0016020(InterPro)|GO:0016887(InterPro)
Sed14g1639 1007 ProSitePatterns E1-E2 ATPases phosphorylation site. 664 670 IPR018303 -
Sed14g1639 1007 SFLD p-type atpase 644 933 IPR044492 -
Sed14g1639 1007 CDD HMA 61 121 IPR006121 GO:0046872(InterPro)
Sed14g1639 1007 CDD P-type_ATPase_Cu-like 303 977 - -
Sed14g1639 1007 FunFam Probable copper-transporting ATPase HMA5 791 938 - -
Sed14g1639 1007 FunFam Copper-exporting P-type ATPase 673 814 - -
Sed14g1639 1007 Gene3D - 629 938 IPR023214 -
Sed14g1639 1007 PANTHER P-TYPE CATION-TRANSPORTING ATPASE 29 1004 - -
Sed14g1639 1007 NCBIfam HAD-IC family P-type ATPase 415 690 IPR001757 GO:0005215(InterPro)|GO:0005524(InterPro)|GO:0016020(InterPro)|GO:0016887(InterPro)
Sed14g1639 1007 NCBIfam HAD-IC family P-type ATPase 751 960 IPR001757 GO:0005215(InterPro)|GO:0005524(InterPro)|GO:0016020(InterPro)|GO:0016887(InterPro)
Sed14g1639 1007 FunFam Copper-exporting P-type ATPase A 138 207 - -
Sed14g1639 1007 SFLD C1.7: P-type atpase like 644 933 - -
Sed14g1639 1007 PRINTS P-type cation-transporting ATPase superfamily signature 806 817 - -
Sed14g1639 1007 PRINTS P-type cation-transporting ATPase superfamily signature 904 916 - -
Sed14g1639 1007 PRINTS P-type cation-transporting ATPase superfamily signature 662 676 - -
Sed14g1639 1007 PRINTS P-type cation-transporting ATPase superfamily signature 828 838 - -
Sed14g1639 1007 PRINTS P-type cation-transporting ATPase superfamily signature 498 512 - -
Sed14g1639 1007 PRINTS P-type cation-transporting ATPase superfamily signature 881 900 - -
Sed14g1639 1007 Pfam E1-E2 ATPase 443 641 - -
Sed14g1639 1007 NCBIfam copper ion binding protein 57 120 IPR006122 GO:0005507(InterPro)
Sed14g1639 1007 NCBIfam copper ion binding protein 142 204 IPR006122 GO:0005507(InterPro)
Sed14g1639 1007 Gene3D - 54 126 - -
Sed14g1639 1007 FunFam Copper-transporting ATPase 1, putative 430 552 - -
Sed14g1639 1007 SUPERFAMILY Calcium ATPase, transmembrane domain M 399 969 IPR023298 -
Sed14g1639 1007 Gene3D - 430 552 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Sed10g0023 Sed-Chr10:144158 Sed14g1639 Sed-Chr14:24568967 0.00E+00 dispersed
Sed11g0565 Sed-Chr11:6066640 Sed14g1639 Sed-Chr14:24568967 8.60E-65 dispersed
Sed12g2195 Sed-Chr12:32410702 Sed14g1639 Sed-Chr14:24568967 3.20E-68 dispersed
Sed13g1909 Sed-Chr13:24038531 Sed14g1639 Sed-Chr14:24568967 3.00E-100 dispersed
Sed14g0722 Sed-Chr14:7434904 Sed14g1639 Sed-Chr14:24568967 6.20E-240 dispersed
Sed14g0923 Sed-Chr14:18280057 Sed14g1639 Sed-Chr14:24568967 6.10E-28 dispersed
Sed05g3458 Sed-Chr5:43433441 Sed14g1639 Sed-Chr14:24568967 4.60E-186 transposed
Sed10g0022 Sed-Chr10:144158 Sed14g1639 Sed-Chr14:24568967 0.00E+00 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sed14g1639 K17686 - csv:101205642 1781.53