Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Sed14g1668 | ATGATGGATTCAACAAGGAGTTGGTTCCAGAAGTTCCAACATAGAGTAAAGAAGGAAACTGTAAATGAGAATGAGGTTCAAGATGCACCTTCAAGCGCGACAACACAAAAAGTTGAGGTTGCCAAGCAATATATTGAAAACCATTACAAATCTCAAATGAAGTCATTGCAAGATAGGAAGGAGAGACGCTGGGTGTTGGAGAGAAGGCTTGCCGATGCCGATGCTTCTGAGGAAGATCAAATTAATGTGCTTAAGTATTTAGAACAGAAGGAGACTGAATACATGCGCCTTCGTAGACATAAAATGGGTGTTGAGGACTTTGAACTTTTGACAATCATAGGAAGGGGTGCATTTGGGGAGGTGAGACTTTGTAGAGAAAAAACCACAGGCCACGTGTATGCAATGAAGAAGCTTATGAAATCTGAGATGCTTCGTAGGGGCCAGGTGGAACATGTCAGAGCTGAAAGAAATCTTCTAGCAGAGGTTGACAGTGCCTACATTGTGAAGTTATACTGCTCCTTCCAGGATGACGATTTTTTGTATCTTATAATGCAATATCTTCCTGGAGGTGATATGATGACTCTGTTAATGCGCAAGGATATTTTGACAGAGGATGAGGCTAGATTTTATGTTGGGGAAACAGTCCTTGCTATAGAGTCCATTCACAAGCATAATTACATTCACAGAGACATCAAGCCTGATAATTTACTGCTTGATCGTTATGGCCACATTAAACTCTCAGATTTTGGGTTGTGTAAACCCTTGGAGTCTAGTAGTTTCCCTAATCTCTCCGAGCCAGAAAATGTAATGGAGAAGAATGTCAAATCTTCCGCAGAAAATGATAATCAGTTCAGGGTAGCGAAACGAACACAACAAGAACAATTGTTACATTGGCAAAAAAACAGGCGAACATTGGCTTATTCAGCTGTTGGAACGCCTGACTATATTGCTCCAGAAGTGTTATTGAGGAAGGGATATGGAATGGAGTGCGACTGGTGGTCTCTTGGCGCAATTATATATGAAATGCTTGTGGGATTTCCACCTTTCTATTCTGATGATCCAATGTCTACATGTAGAAAGATTATTAACTGGAGAACTCATCTGAGATTCCCAAAAGAAGCAAAACTTTCCATTGAGGCTAAAGATCTTATTTGCAAACTTCTATGCAATGTTGAGCAAAGAATTGGAACCAAAGGAGCTACAGAAATTAAGGCGCATCCATGGTTTAAAGGTATACGATGGGATAAATTATATCAAGTGGAAGCAGTCATCATCCCTGAGATTCACGATGAGTTAGATACTCAAAATTTTGAGAAGTATGAAGAGCTGGGTGTTCCGGGTCAAACTCCATCAAAGTCTGGTCCTTTAAGAAAGAAAGTTTCACCCAAGGATGTAAACTTTGTTGGTTATACGTACAAGAATTTCGAAATCGTCAATGAACACCACTTGTCTGGCATTACCGAGATGAGGAAAAAGCCTAACAAGACCAAGAAACCATCAATTACAACTCTATTTGCCACAGCGGATTCTTCAGAGCAGCCTGTTCAAAGAAGTTTTCCAAATCATTTGCCAACCCATCTAGAAGTCTCGGAAAGCCCTGACCCATCACCTCGTTCAACCGAATCACCAAAACTGCCGAAGCGGTGGGGAAGATGA | 1656 | 40.94 | MMDSTRSWFQKFQHRVKKETVNENEVQDAPSSATTQKVEVAKQYIENHYKSQMKSLQDRKERRWVLERRLADADASEEDQINVLKYLEQKETEYMRLRRHKMGVEDFELLTIIGRGAFGEVRLCREKTTGHVYAMKKLMKSEMLRRGQVEHVRAERNLLAEVDSAYIVKLYCSFQDDDFLYLIMQYLPGGDMMTLLMRKDILTEDEARFYVGETVLAIESIHKHNYIHRDIKPDNLLLDRYGHIKLSDFGLCKPLESSSFPNLSEPENVMEKNVKSSAENDNQFRVAKRTQQEQLLHWQKNRRTLAYSAVGTPDYIAPEVLLRKGYGMECDWWSLGAIIYEMLVGFPPFYSDDPMSTCRKIINWRTHLRFPKEAKLSIEAKDLICKLLCNVEQRIGTKGATEIKAHPWFKGIRWDKLYQVEAVIIPEIHDELDTQNFEKYEELGVPGQTPSKSGPLRKKVSPKDVNFVGYTYKNFEIVNEHHLSGITEMRKKPNKTKKPSITTLFATADSSEQPVQRSFPNHLPTHLEVSESPDPSPRSTESPKLPKRWGR | 551 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
14 | 24779204 | 24787786 | + | Sed0010789.1 | Sed14g1668 | 737386 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Sed14g1668 | 551 | FunFam | Non-specific serine/threonine protein kinase | 308 | 427 | - | - | |
Sed14g1668 | 551 | ProSiteProfiles | AGC-kinase C-terminal domain profile. | 410 | 482 | IPR000961 | GO:0004674(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Sed14g1668 | 551 | PANTHER | SERINE/THREONINE-PROTEIN KINASE | 26 | 477 | IPR050236 | GO:0004674(PANTHER)|GO:0018105(PANTHER)|GO:0035556(PANTHER) | |
Sed14g1668 | 551 | FunFam | Non-specific serine/threonine protein kinase | 191 | 258 | - | - | |
Sed14g1668 | 551 | Pfam | Protein kinase C terminal domain | 429 | 472 | IPR017892 | GO:0004674(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Sed14g1668 | 551 | MobiDBLite | consensus disorder prediction | 508 | 551 | - | - | |
Sed14g1668 | 551 | SUPERFAMILY | Protein kinase-like (PK-like) | 88 | 456 | IPR011009 | - | |
Sed14g1668 | 551 | SMART | serkin_6 | 107 | 409 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Sed14g1668 | 551 | Gene3D | Phosphorylase Kinase; domain 1 | 428 | 439 | - | - | |
Sed14g1668 | 551 | CDD | STKc_NDR_like | 105 | 473 | - | - | |
Sed14g1668 | 551 | SMART | pkinase_C_6 | 410 | 474 | IPR000961 | GO:0004674(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Sed14g1668 | 551 | CDD | MobB_NDR_LATS-like | 41 | 102 | - | - | |
Sed14g1668 | 551 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 226 | 238 | IPR008271 | GO:0004672(InterPro)|GO:0006468(InterPro) | |
Sed14g1668 | 551 | Pfam | Protein kinase domain | 303 | 409 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Sed14g1668 | 551 | Pfam | Protein kinase domain | 108 | 259 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Sed14g1668 | 551 | MobiDBLite | consensus disorder prediction | 508 | 525 | - | - | |
Sed14g1668 | 551 | FunFam | Non-specific serine/threonine protein kinase | 78 | 190 | - | - | |
Sed14g1668 | 551 | ProSiteProfiles | Protein kinase domain profile. | 107 | 409 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Sed14g1668 | 551 | Gene3D | Transferase(Phosphotransferase) domain 1 | 191 | 258 | - | - | |
Sed14g1668 | 551 | ProSitePatterns | Protein kinases ATP-binding region signature. | 113 | 136 | IPR017441 | GO:0005524(InterPro) | |
Sed14g1668 | 551 | Gene3D | Transferase(Phosphotransferase) domain 1 | 305 | 427 | - | - | |
Sed14g1668 | 551 | Gene3D | Phosphorylase Kinase; domain 1 | 79 | 190 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Sed09g1041 | Sed-Chr9:33812872 | Sed14g1668 | Sed-Chr14:24779204 | 6.50E-159 | dispersed | |
Sed09g1042 | Sed-Chr9:33815258 | Sed14g1668 | Sed-Chr14:24779204 | 1.90E-200 | dispersed | |
Sed13g1883 | Sed-Chr13:23834491 | Sed14g1668 | Sed-Chr14:24779204 | 1.00E-177 | dispersed | |
Sed13g1884 | Sed-Chr13:23834491 | Sed14g1668 | Sed-Chr14:24779204 | 1.80E-165 | dispersed | |
Sed14g1668 | Sed-Chr14:24779204 | Sed05g3024 | Sed-Chr5:40702391 | 3.00E-42 | dispersed | |
Sed14g1668 | Sed-Chr14:24779204 | Sed14g1669 | Sed-Chr14:24779204 | 7.40E-267 | tandem | |
Sed10g0041 | Sed-Chr10:252420 | Sed14g1668 | Sed-Chr14:24779204 | 4.30E-264 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
80219 | PF00069 | Pkinase | 4.00E-64 | CL0016 | Sed | PK |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Sed14g1668 | K08790 | - | csv:101208438 | 1031.55 |