Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sed14g1668 ATGATGGATTCAACAAGGAGTTGGTTCCAGAAGTTCCAACATAGAGTAAAGAAGGAAACTGTAAATGAGAATGAGGTTCAAGATGCACCTTCAAGCGCGACAACACAAAAAGTTGAGGTTGCCAAGCAATATATTGAAAACCATTACAAATCTCAAATGAAGTCATTGCAAGATAGGAAGGAGAGACGCTGGGTGTTGGAGAGAAGGCTTGCCGATGCCGATGCTTCTGAGGAAGATCAAATTAATGTGCTTAAGTATTTAGAACAGAAGGAGACTGAATACATGCGCCTTCGTAGACATAAAATGGGTGTTGAGGACTTTGAACTTTTGACAATCATAGGAAGGGGTGCATTTGGGGAGGTGAGACTTTGTAGAGAAAAAACCACAGGCCACGTGTATGCAATGAAGAAGCTTATGAAATCTGAGATGCTTCGTAGGGGCCAGGTGGAACATGTCAGAGCTGAAAGAAATCTTCTAGCAGAGGTTGACAGTGCCTACATTGTGAAGTTATACTGCTCCTTCCAGGATGACGATTTTTTGTATCTTATAATGCAATATCTTCCTGGAGGTGATATGATGACTCTGTTAATGCGCAAGGATATTTTGACAGAGGATGAGGCTAGATTTTATGTTGGGGAAACAGTCCTTGCTATAGAGTCCATTCACAAGCATAATTACATTCACAGAGACATCAAGCCTGATAATTTACTGCTTGATCGTTATGGCCACATTAAACTCTCAGATTTTGGGTTGTGTAAACCCTTGGAGTCTAGTAGTTTCCCTAATCTCTCCGAGCCAGAAAATGTAATGGAGAAGAATGTCAAATCTTCCGCAGAAAATGATAATCAGTTCAGGGTAGCGAAACGAACACAACAAGAACAATTGTTACATTGGCAAAAAAACAGGCGAACATTGGCTTATTCAGCTGTTGGAACGCCTGACTATATTGCTCCAGAAGTGTTATTGAGGAAGGGATATGGAATGGAGTGCGACTGGTGGTCTCTTGGCGCAATTATATATGAAATGCTTGTGGGATTTCCACCTTTCTATTCTGATGATCCAATGTCTACATGTAGAAAGATTATTAACTGGAGAACTCATCTGAGATTCCCAAAAGAAGCAAAACTTTCCATTGAGGCTAAAGATCTTATTTGCAAACTTCTATGCAATGTTGAGCAAAGAATTGGAACCAAAGGAGCTACAGAAATTAAGGCGCATCCATGGTTTAAAGGTATACGATGGGATAAATTATATCAAGTGGAAGCAGTCATCATCCCTGAGATTCACGATGAGTTAGATACTCAAAATTTTGAGAAGTATGAAGAGCTGGGTGTTCCGGGTCAAACTCCATCAAAGTCTGGTCCTTTAAGAAAGAAAGTTTCACCCAAGGATGTAAACTTTGTTGGTTATACGTACAAGAATTTCGAAATCGTCAATGAACACCACTTGTCTGGCATTACCGAGATGAGGAAAAAGCCTAACAAGACCAAGAAACCATCAATTACAACTCTATTTGCCACAGCGGATTCTTCAGAGCAGCCTGTTCAAAGAAGTTTTCCAAATCATTTGCCAACCCATCTAGAAGTCTCGGAAAGCCCTGACCCATCACCTCGTTCAACCGAATCACCAAAACTGCCGAAGCGGTGGGGAAGATGA 1656 40.94 MMDSTRSWFQKFQHRVKKETVNENEVQDAPSSATTQKVEVAKQYIENHYKSQMKSLQDRKERRWVLERRLADADASEEDQINVLKYLEQKETEYMRLRRHKMGVEDFELLTIIGRGAFGEVRLCREKTTGHVYAMKKLMKSEMLRRGQVEHVRAERNLLAEVDSAYIVKLYCSFQDDDFLYLIMQYLPGGDMMTLLMRKDILTEDEARFYVGETVLAIESIHKHNYIHRDIKPDNLLLDRYGHIKLSDFGLCKPLESSSFPNLSEPENVMEKNVKSSAENDNQFRVAKRTQQEQLLHWQKNRRTLAYSAVGTPDYIAPEVLLRKGYGMECDWWSLGAIIYEMLVGFPPFYSDDPMSTCRKIINWRTHLRFPKEAKLSIEAKDLICKLLCNVEQRIGTKGATEIKAHPWFKGIRWDKLYQVEAVIIPEIHDELDTQNFEKYEELGVPGQTPSKSGPLRKKVSPKDVNFVGYTYKNFEIVNEHHLSGITEMRKKPNKTKKPSITTLFATADSSEQPVQRSFPNHLPTHLEVSESPDPSPRSTESPKLPKRWGR 551
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
14 24779204 24787786 + Sed0010789.1 Sed14g1668 737386
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sed14g1668 551 FunFam Non-specific serine/threonine protein kinase 308 427 - -
Sed14g1668 551 ProSiteProfiles AGC-kinase C-terminal domain profile. 410 482 IPR000961 GO:0004674(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Sed14g1668 551 PANTHER SERINE/THREONINE-PROTEIN KINASE 26 477 IPR050236 GO:0004674(PANTHER)|GO:0018105(PANTHER)|GO:0035556(PANTHER)
Sed14g1668 551 FunFam Non-specific serine/threonine protein kinase 191 258 - -
Sed14g1668 551 Pfam Protein kinase C terminal domain 429 472 IPR017892 GO:0004674(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Sed14g1668 551 MobiDBLite consensus disorder prediction 508 551 - -
Sed14g1668 551 SUPERFAMILY Protein kinase-like (PK-like) 88 456 IPR011009 -
Sed14g1668 551 SMART serkin_6 107 409 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Sed14g1668 551 Gene3D Phosphorylase Kinase; domain 1 428 439 - -
Sed14g1668 551 CDD STKc_NDR_like 105 473 - -
Sed14g1668 551 SMART pkinase_C_6 410 474 IPR000961 GO:0004674(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Sed14g1668 551 CDD MobB_NDR_LATS-like 41 102 - -
Sed14g1668 551 ProSitePatterns Serine/Threonine protein kinases active-site signature. 226 238 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Sed14g1668 551 Pfam Protein kinase domain 303 409 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Sed14g1668 551 Pfam Protein kinase domain 108 259 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Sed14g1668 551 MobiDBLite consensus disorder prediction 508 525 - -
Sed14g1668 551 FunFam Non-specific serine/threonine protein kinase 78 190 - -
Sed14g1668 551 ProSiteProfiles Protein kinase domain profile. 107 409 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Sed14g1668 551 Gene3D Transferase(Phosphotransferase) domain 1 191 258 - -
Sed14g1668 551 ProSitePatterns Protein kinases ATP-binding region signature. 113 136 IPR017441 GO:0005524(InterPro)
Sed14g1668 551 Gene3D Transferase(Phosphotransferase) domain 1 305 427 - -
Sed14g1668 551 Gene3D Phosphorylase Kinase; domain 1 79 190 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Sed09g1041 Sed-Chr9:33812872 Sed14g1668 Sed-Chr14:24779204 6.50E-159 dispersed
Sed09g1042 Sed-Chr9:33815258 Sed14g1668 Sed-Chr14:24779204 1.90E-200 dispersed
Sed13g1883 Sed-Chr13:23834491 Sed14g1668 Sed-Chr14:24779204 1.00E-177 dispersed
Sed13g1884 Sed-Chr13:23834491 Sed14g1668 Sed-Chr14:24779204 1.80E-165 dispersed
Sed14g1668 Sed-Chr14:24779204 Sed05g3024 Sed-Chr5:40702391 3.00E-42 dispersed
Sed14g1668 Sed-Chr14:24779204 Sed14g1669 Sed-Chr14:24779204 7.40E-267 tandem
Sed10g0041 Sed-Chr10:252420 Sed14g1668 Sed-Chr14:24779204 4.30E-264 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
80219 PF00069 Pkinase 4.00E-64 CL0016 Sed PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sed14g1668 K08790 - csv:101208438 1031.55