Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sed14g1669 ATGATGGATTCAACAAGGAGTTGGTTCCAGAAGTTCCAACATAGAGTAAAGAAGGAAACTGTAAATGAGAATGAGGTTCAAGATGCACCTTCAAGCGCGACAACACAAAAAGTTGAGGTTGCCAAGCAATATATTGAAAACCATTACAAATCTCAAATGAAGTCATTGCAAGATAGGAAGGAGAGACGCTGGGTGTTGGAGAGAAGGCTTGCCGATGCCGATGCTTCTGAGGAAGATCAAATTAATGTGCTTAAGTATTTAGAACAGAAGGAGACTGAATACATGCGCCTTCGTAGACATAAAATGGGTGTTGAGGACTTTGAACTTTTGACAATCATAGGAAGGGGTGCATTTGGGGAGGTGAGACTTTGTAGAGAAAAAACCACAGGCCACGTGTATGCAATGAAGAAGCTTATGAAATCTGAGATGCTTCGTAGGGGCCAGGTGGAACATGTCAGAGCTGAAAGAAATCTTCTAGCAGAGGTTGACAGTGCCTACATTGTGAAGTTATACTGCTCCTTCCAGGATGACGATTTTTTGTATCTTATAATGCAATATCTTCCTGGAGGTGATATGATGACTCTGTTAATGCGCAAGGATATTTTGACAGAGGATGAGGCTAGATTTTATGTTGGGGAAACAGTCCTTGCTATAGAGTCCATTCACAAGCATAATTACATTCACAGAGACATCAAGCCTGATAATTTACTGCTTGATCGTTATGGCCACATTAAACTCTCAGATTTTGGGTTGTGTAAACCCTTGGAGTCTAGTAGTTTCCCTAATCTCTCCGAGCCAGAAAATGTAATGGAGAAGAATGTCAAATCTTCCGCAGAAAATGATAATCAGTTCAGGGTAGCGAAACGAACACAACAAGAACAATTGTTACATTGGCAAAAAAACAGGCGAACATTGGCTTATTCAGCTGTTGGAACGCCTGACTATATTGCTCCAGAAGTGTTATTGAGGAAGGGATATGGAATGGAGTGCGACTGGTGGTCTCTTGGCGCAATTATATATGAAATGCTTGTGGGATTTCCACCTTTCTATTCTGATGATCCAATGTCTACATGTAGAAAGATTATTAACTGGAGAACTCATCTGAGATTCCCAAAAGAAGCAAAACTTTCCATTGAGGCTAAAGATCTTATTTGCAAACTTCTATGCAATGTTGAGCAAAGAATTGGAACCAAAGGAGCTACAGAAATTAAGGCGCATCCATGGTTTAAAGGTATACGATGGGATAAATTATATCAAGTGGAAGCAGTCATCATCCCTGAGATTCACGATGAGTTAGATACTCAAAATTTTGAGAAGTATGAAGAGCTGGGTGTTCCGGGTCAAACTCCATCAAAGTCTGGTCCTTTAAGAAAGGTAAGTCTGTGCTTTGTTGTTCTGCAAAGCTCTTAA 1410 40.35 MMDSTRSWFQKFQHRVKKETVNENEVQDAPSSATTQKVEVAKQYIENHYKSQMKSLQDRKERRWVLERRLADADASEEDQINVLKYLEQKETEYMRLRRHKMGVEDFELLTIIGRGAFGEVRLCREKTTGHVYAMKKLMKSEMLRRGQVEHVRAERNLLAEVDSAYIVKLYCSFQDDDFLYLIMQYLPGGDMMTLLMRKDILTEDEARFYVGETVLAIESIHKHNYIHRDIKPDNLLLDRYGHIKLSDFGLCKPLESSSFPNLSEPENVMEKNVKSSAENDNQFRVAKRTQQEQLLHWQKNRRTLAYSAVGTPDYIAPEVLLRKGYGMECDWWSLGAIIYEMLVGFPPFYSDDPMSTCRKIINWRTHLRFPKEAKLSIEAKDLICKLLCNVEQRIGTKGATEIKAHPWFKGIRWDKLYQVEAVIIPEIHDELDTQNFEKYEELGVPGQTPSKSGPLRKVSLCFVVLQSS 469
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
14 24779204 24787786 + Sed0010789.2 Sed14g1669 737387
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sed14g1669 469 PANTHER SERINE/THREONINE-PROTEIN KINASE 26 437 IPR050236 GO:0004674(PANTHER)|GO:0018105(PANTHER)|GO:0035556(PANTHER)
Sed14g1669 469 Gene3D Phosphorylase Kinase; domain 1 79 190 - -
Sed14g1669 469 SUPERFAMILY Protein kinase-like (PK-like) 88 457 IPR011009 -
Sed14g1669 469 Pfam Protein kinase domain 303 409 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Sed14g1669 469 Pfam Protein kinase domain 108 259 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Sed14g1669 469 FunFam Non-specific serine/threonine protein kinase 308 427 - -
Sed14g1669 469 SMART serkin_6 107 409 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Sed14g1669 469 Gene3D Transferase(Phosphotransferase) domain 1 300 429 - -
Sed14g1669 469 Gene3D Transferase(Phosphotransferase) domain 1 191 258 - -
Sed14g1669 469 CDD MobB_NDR_LATS-like 41 102 - -
Sed14g1669 469 ProSiteProfiles AGC-kinase C-terminal domain profile. 410 469 IPR000961 GO:0004674(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Sed14g1669 469 CDD STKc_NDR_like 105 460 - -
Sed14g1669 469 ProSitePatterns Serine/Threonine protein kinases active-site signature. 226 238 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Sed14g1669 469 FunFam Non-specific serine/threonine protein kinase 78 190 - -
Sed14g1669 469 FunFam Non-specific serine/threonine protein kinase 191 258 - -
Sed14g1669 469 ProSiteProfiles Protein kinase domain profile. 107 409 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Sed14g1669 469 ProSitePatterns Protein kinases ATP-binding region signature. 113 136 IPR017441 GO:0005524(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Sed10g0041 Sed-Chr10:252420 Sed14g1669 Sed-Chr14:24779204 5.30E-246 dispersed
Sed14g1669 Sed-Chr14:24779204 Sed05g3024 Sed-Chr5:40702391 2.60E-42 dispersed
Sed14g1668 Sed-Chr14:24779204 Sed14g1669 Sed-Chr14:24779204 7.40E-267 tandem
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
80220 PF00069 Pkinase 2.50E-64 CL0016 Sed PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sed14g1669 K08790 - csv:101208438 865.529