Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sed14g1679 ATGGACGTCTTGAAGGTTCCCCTGCGCGAACCGCAGGACAATGCGGAGGGCGTCTCCGTTTGGGAATGGTCCGGCTCTGCGCTCGACGAGGGCGATGCTCCATCCCTCTGGTTTTCGCATTATCTTGGAAAACCAAGTCGCTTGGTTCGCTTCAATGCAGCTTCTCAATCCAGAAAAGTGGATCCCAGCTATGGTCCTGGACATCAAATCATGTTCTCTGATTTGTTTCCCTTCCTCCTCATATCTCAGGGATCTTTGGATACCTTGAATCAACTTCTCCAACAGCCCATTTCAATTAACCGATTTAGACCCAACATTCTTGTCGATGGGTGTGAACCATTCTCTGAGGATTTGTGGACAGAAATCGGAATACACAAGCTCATATTTCAGGGTGTCAGGCTGTGCGCCCGCTGCAAGATACCTTCAATAGACCAAGAGACTGGAATCGCAGGACCTGAGCCGAATGAAACTCTGAAGAATATGAGATCCGATGCAGTCCTGCGTTCAAACCATAAACAGAATGGAAAAGTAAGAATTGAAACATGCATATACTCTTTTATTGTGGAAAATGCTTCACAAAAGATTTATTTGGATATGATTTGCCAGGTTTATTTTGGCCAGAATTTGGTTTGGAAGAATTTAGCTATGGAAGGGAAGGGGAAAATCGTAAAAGTAGGAGATAAAGTGGAGATTCTGGGGAAGGTTTCCTCTGTAGCAGAAGCAGTAGCTTGA 732 45.22 MDVLKVPLREPQDNAEGVSVWEWSGSALDEGDAPSLWFSHYLGKPSRLVRFNAASQSRKVDPSYGPGHQIMFSDLFPFLLISQGSLDTLNQLLQQPISINRFRPNILVDGCEPFSEDLWTEIGIHKLIFQGVRLCARCKIPSIDQETGIAGPEPNETLKNMRSDAVLRSNHKQNGKVRIETCIYSFIVENASQKIYLDMICQVYFGQNLVWKNLAMEGKGKIVKVGDKVEILGKVSSVAEAVA 243
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
14 24817719 24820360 + Sed0008992.3 Sed14g1679 737397

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Sed14g1679 243 SUPERFAMILY MOSC N-terminal domain-like 1 58 - -
Sed14g1679 243 Pfam MOSC domain 68 172 IPR005302 GO:0003824(InterPro)|GO:0030151(InterPro)|GO:0030170(InterPro)
Sed14g1679 243 SUPERFAMILY PK beta-barrel domain-like 79 149 IPR011037 -
Sed14g1679 243 PANTHER MOLYBDOPTERIN COFACTOR SULFURASE MOSC 10 212 - -
Sed14g1679 243 ProSiteProfiles MOSC domain profile. 46 232 IPR005302 GO:0003824(InterPro)|GO:0030151(InterPro)|GO:0030170(InterPro)
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sed14g1679 K27318 - - csv:101222373 355.525
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Sed14g1678 Sed-Chr14:24817719 Sed14g1679 Sed-Chr14:24817719 5.00E-57 tandem
Sed14g1679 Sed-Chr14:24817719 Sed14g1680 Sed-Chr14:24817719 2.20E-90 tandem
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi19g1040 . . . . . . . . . . . . . . . . . . . . . . . . Cla02g01813 Cam02g1918 Cec02g1939 Cco02g1983 Clacu02g1900 Cmu02g1847 Cre02g2162 . . . . . . . . Blo15g00605 . . . . . . Bma12g00598 Sed14g1679 . . . . . . . . Bhi10g00965 Tan05g0609 Cmetu11g0122 . . . . . . . . . . . . Csa06g01170 Chy11g01023 .