Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sed14g1705 ATGAAGTTGGATTTGGTGTTGAAGTTGAAGTTGGAGTTGAAGTTGTTGTTGATCACCTTGCTCCTAATTCCTTGTGCCTCCTCCACCTGTCTGTCCCTCATTAAGGCACAAGCTTGTATTCTTGTTTCCATCAAACAGTCTTTTGGTAAACCAGCAGGTCCCTTGCTCCTTGACTGGAATGCTTCAAATTACTCTTCCCTCTGCTCTTGGACTGGAGTTCAATGCCAGGATGATGATGATGATCACATCGTGTCGAGCCTCGACATTTCCAATCTCAACATCTCCGGGGCCTTCCCCCTTCTGATTCACAACCTAACCAACCTTCGCTCTCTCAACATTTCCAACAATCAGCTCACCGGCCAACTCCACTGGAACTATTCTCTCCTCAAACGCCTCCAAGTATTTGATGCTTACAACAATAACTTCAGCGGCTCCCTGCCCCAACTTACCAGCCTAAAGCACTTGAATCTCGGCGGCAATTTCTTCTCCGGCCCAATCCCGCCAACCTACGGTGATATGGTGGAGCTCACTTTTCTCTCCCTTGCCGGCAATGACTTGAGCGGTCCCATTCCCACTGAGTTGGGCAACCTTACAAATCTCCAGCGGCTTTATTTGGGATACTACAATCAGTTTGAGGGTGGAATACCCCCTCAACTCGGAAACCTTGTGAATTTGAATCATCTCGACCTTGCCAGTTGTAGCTTACGAGGCCCAATTCCACCCGAGTTGGGGAATCTCAACCAGTTAAACACACTGTTCTTGCAGACAAATCAGCTCAGTGGCTCAATTCCCCCCCGGTTGGGCAACTTGAGCAACTTGGTTTCGCTTGACCTCTCCAACAACGAATTAACAGGAGAGATCCCCCTTGAACTTGGCAACCTCCGCCAGCTTTCCCTCCTGAGCTTTTTCATCAACAAGTTTCACGGGGAGATTCCTCATGTTCTAGCCAATCTTCCCAACTTGGAGGTTTTGAAGTTGTGGCAAAATAACTTCACTGGAGCCATTCCATCAAAGCTTGGTCAGAATGGGAGATTGACTGAGCTTGACTTGTCCACCAACAAGCTCACAGGACTGGTTCCACAGCGTCTGTGCCTCGGAGGAAGGCTGAACATCTTGATTTTACTCAACAATTTTCTGTTCGGGCCTGTGCCGCGTGATCTAGGACGATGTCAGGCGCTTGTAAGAGTTCGGATGGGTCAGAATTACTTGACCGGATCAATCCCAGAGGGGCTGCTATACTTGCCACAGCTCTCCCTTGTGGAATTTCAGAACAACTACCTGAGTGGACCCCTTCCACAAGGCATATTGGCAATGACATCGAAACTCGGCCTCATAAACCTTTCCAACAATCGCCTTTCGGGATCCCTTCCCACCTCCATTGGAAACTTCACGAACTTGCAGAATCTGCTTGTGGGTGGAAACCATTTGTCCGGGGAAATTCCTTGTGAAATAGGCAAACTAAGAAACCTTGTGAAGCTAGACATGAGCAGAAACAAGCTGTCGGGTAGAATCCCGGGGGAATTGGGTACGTGTGTGTCCCTCACTTATCTGGATTTGAGCCTGAATCAGCTAAGCTCTGAGATCCCAATTGCACTCTCGCAGATTCGAATCTTGAATTACCTAAACCTGTCTTGGAACCATCTAAACCAGAGCCTCCCGAGGGAAATTGGGTCCATAAAGAGCTTGACCTGCGCGGACTTCTCCCACAATAACTTGTCGGGCGGTATACCCGAAAGTGGGCAGTTTTTACTGTTCAATTGGACATCCTTCGAGGGGAACCCTCAACTGTGTGGTGGATCCTCAAGCTGCAGCAGCAGTAAGGAGGAGGAGGCCGAGACAAGATCATCGTCAACCCGAAATGGGAACAAATATAAGCTGGTGTTTGCGTTGGGACTACTGGCGTGTTCGGTAATATTCGCGACAGTGGCAATCATTCAAACAAGGAAGGCGAAGAAGAAGAAGAAGTCAAGGGGTTGGTGGAAGGTAGCAACATTCCAGAAGGTTTCATTTGGGAGCAAGGAGATCGTGGAGTGCCTGAAAGAGAGCAACGTAATTGGAAGAGGTGGAGCTGGAGTTGTGTACAAAGGAACAATGCAGAGTGGAGAAGAGGTAGCCATCAAGAAGCTGTTGGGGGGCGGGTCCTCCCACGACAACGGCTTGTCCGCGGAGATACAGACGCTGGCCAAGATTCGGCACAGGAACATAGTGAGGCTGCTGGCATTCTGCTCCAACAAGGACACCAATCTGCTGGTGTACGAGTACATGCCCAATGGAAGCTTGGGGGCAGTGCTCCATGGGAAGAGGGGAGCTTCTCTCCAATGGGAGACCAGGCTGAGCATAGCCATGGAAGCGGCCAAAGGGCTAGCCTACTTGCACCACGACTGCTCCCCCCTCATCATTCACAGAGACGTCAAGTCCAACAACATTTTGCTCAACTCCGACTACGAGGCTCATGTCGCCGACTTTGGCCTCGCCAAGTTCTTCAACCACAATGGAGCATCCGAGTGCATGTCTGTCATCGCCGGTTCATACGGTTATATTGCTCCAGAATATGCATACACATTAAAAGTGGATGAAAAAAGTGATGTCTACAGTTTTGGAGTGGTGTTGTTGGAGCTTATTACAGGGCGGAAGCCTGTGGGCAATTTTGGGGAAGATGGTTTGGACATTGTCCAATGGACTAAAATCCAAACCAACTCTATCAAAGAAGGAGTTGTTAATATACTGGATCAAAGGTTGAGTAACATACCAATAAATGAGGCAGAGCAAATGTTTTTTGTAGCTATGTTATGCGTTCAAGAACACAGCGTGGAGCGACCAACAATGAGAGAAGTGCTTCAAATGCTTGCTCAAGCCCACCAACCAAATACCTTCCACATGCATTGA 2886 48.82 MKLDLVLKLKLELKLLLITLLLIPCASSTCLSLIKAQACILVSIKQSFGKPAGPLLLDWNASNYSSLCSWTGVQCQDDDDDHIVSSLDISNLNISGAFPLLIHNLTNLRSLNISNNQLTGQLHWNYSLLKRLQVFDAYNNNFSGSLPQLTSLKHLNLGGNFFSGPIPPTYGDMVELTFLSLAGNDLSGPIPTELGNLTNLQRLYLGYYNQFEGGIPPQLGNLVNLNHLDLASCSLRGPIPPELGNLNQLNTLFLQTNQLSGSIPPRLGNLSNLVSLDLSNNELTGEIPLELGNLRQLSLLSFFINKFHGEIPHVLANLPNLEVLKLWQNNFTGAIPSKLGQNGRLTELDLSTNKLTGLVPQRLCLGGRLNILILLNNFLFGPVPRDLGRCQALVRVRMGQNYLTGSIPEGLLYLPQLSLVEFQNNYLSGPLPQGILAMTSKLGLINLSNNRLSGSLPTSIGNFTNLQNLLVGGNHLSGEIPCEIGKLRNLVKLDMSRNKLSGRIPGELGTCVSLTYLDLSLNQLSSEIPIALSQIRILNYLNLSWNHLNQSLPREIGSIKSLTCADFSHNNLSGGIPESGQFLLFNWTSFEGNPQLCGGSSSCSSSKEEEAETRSSSTRNGNKYKLVFALGLLACSVIFATVAIIQTRKAKKKKKSRGWWKVATFQKVSFGSKEIVECLKESNVIGRGGAGVVYKGTMQSGEEVAIKKLLGGGSSHDNGLSAEIQTLAKIRHRNIVRLLAFCSNKDTNLLVYEYMPNGSLGAVLHGKRGASLQWETRLSIAMEAAKGLAYLHHDCSPLIIHRDVKSNNILLNSDYEAHVADFGLAKFFNHNGASECMSVIAGSYGYIAPEYAYTLKVDEKSDVYSFGVVLLELITGRKPVGNFGEDGLDIVQWTKIQTNSIKEGVVNILDQRLSNIPINEAEQMFFVAMLCVQEHSVERPTMREVLQMLAQAHQPNTFHMH 961
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
14 24919738 24924460 - Sed0024985.1 Sed14g1705 737423
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sed14g1705 961 PRINTS Leucine-rich repeat signature 487 500 - -
Sed14g1705 961 PRINTS Leucine-rich repeat signature 345 358 - -
Sed14g1705 961 SMART serkin_6 679 956 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Sed14g1705 961 SMART LRR_typ_2 318 342 IPR003591 -
Sed14g1705 961 SMART LRR_typ_2 343 366 IPR003591 -
Sed14g1705 961 SMART LRR_typ_2 487 511 IPR003591 -
Sed14g1705 961 SMART LRR_typ_2 105 130 IPR003591 -
Sed14g1705 961 SMART LRR_typ_2 535 559 IPR003591 -
Sed14g1705 961 SMART LRR_typ_2 270 294 IPR003591 -
Sed14g1705 961 SMART LRR_typ_2 222 246 IPR003591 -
Sed14g1705 961 SMART LRR_typ_2 173 197 IPR003591 -
Sed14g1705 961 SUPERFAMILY Protein kinase-like (PK-like) 674 949 IPR011009 -
Sed14g1705 961 Gene3D Transferase(Phosphotransferase) domain 1 755 960 - -
Sed14g1705 961 FunFam Leucine-rich repeat receptor-like serine/threonine-protein kinase BAM1 648 754 - -
Sed14g1705 961 SUPERFAMILY L domain-like 65 360 - -
Sed14g1705 961 Pfam Leucine rich repeat N-terminal domain 40 75 IPR013210 -
Sed14g1705 961 FunFam Leucine-rich repeat receptor-like serine/threonine-protein kinase 755 961 - -
Sed14g1705 961 Gene3D Ribonuclease Inhibitor 304 607 IPR032675 -
Sed14g1705 961 FunFam Leucine-rich repeat receptor-like serine/threonine-protein kinase BAM3 210 315 - -
Sed14g1705 961 Pfam Protein kinase domain 681 947 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Sed14g1705 961 ProSitePatterns Serine/Threonine protein kinases active-site signature. 799 811 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Sed14g1705 961 ProSiteProfiles Protein kinase domain profile. 679 961 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Sed14g1705 961 Gene3D Ribonuclease Inhibitor 192 290 IPR032675 -
Sed14g1705 961 Gene3D Ribonuclease Inhibitor 35 191 IPR032675 -
Sed14g1705 961 FunFam Leucine-rich repeat receptor-like serine/threonine-protein kinase BAM3 126 209 - -
Sed14g1705 961 FunFam Leucine-rich repeat receptor-like serine/threonine-protein kinase BAM3 322 608 - -
Sed14g1705 961 PANTHER SOMATIC EMBRYOGENESIS RECEPTOR KINASE 1 235 326 - -
Sed14g1705 961 Pfam Leucine Rich Repeat 272 294 IPR001611 GO:0005515(InterPro)
Sed14g1705 961 Pfam Leucine Rich Repeat 489 511 IPR001611 GO:0005515(InterPro)
Sed14g1705 961 Pfam Leucine Rich Repeat 176 197 IPR001611 GO:0005515(InterPro)
Sed14g1705 961 Pfam Leucine Rich Repeat 513 533 IPR001611 GO:0005515(InterPro)
Sed14g1705 961 Pfam Leucine Rich Repeat 465 487 IPR001611 GO:0005515(InterPro)
Sed14g1705 961 Pfam Leucine Rich Repeat 107 122 IPR001611 GO:0005515(InterPro)
Sed14g1705 961 Pfam Leucine Rich Repeat 344 363 IPR001611 GO:0005515(InterPro)
Sed14g1705 961 Pfam Leucine Rich Repeat 444 463 IPR001611 GO:0005515(InterPro)
Sed14g1705 961 Pfam Leucine Rich Repeat 151 171 IPR001611 GO:0005515(InterPro)
Sed14g1705 961 Pfam Leucine Rich Repeat 224 246 IPR001611 GO:0005515(InterPro)
Sed14g1705 961 SUPERFAMILY L domain-like 311 597 - -
Sed14g1705 961 ProSiteProfiles Leucine-rich repeat profile. 272 295 IPR001611 GO:0005515(InterPro)
Sed14g1705 961 Gene3D Phosphorylase Kinase; domain 1 642 754 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Sed14g0970 Sed-Chr14:18916856 Sed14g1705 Sed-Chr14:24919738 7.20E-92 dispersed
Sed14g0971 Sed-Chr14:18940819 Sed14g1705 Sed-Chr14:24919738 8.00E-134 dispersed
Sed14g1490 Sed-Chr14:23242860 Sed14g1705 Sed-Chr14:24919738 1.00E-72 dispersed
Sed14g1705 Sed-Chr14:24919738 Sed11g0064 Sed-Chr11:603717 1.30E-61 dispersed
Sed14g1705 Sed-Chr14:24919738 Sed14g1706 Sed-Chr14:24924622 1.60E-232 tandem
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
80221 PF00069 Pkinase 2.50E-47 CL0016 Sed PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sed14g1705 - - - 0.0