Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sed14g1706 ATGAAGTTGGATTTGGTGTTGAAGTTGAAGTTGGAGTTGAAGTTGTTGTTGATCACCTTGCTCCTAATTCCTTGTGCCTCCTCCACCTCTCTGTCCCTCATTAAGGCACAAGCTTGTATTCTTGTTTCCATCAAACAGTCTTTTGGTAAACCAGCAGGTCCCTTGCTCCTTGACTGGAATGCTTCAAATTACTCTTCCCTCTGCTCTTGGACTGGAGTTCAATGCCAGGATGATGATGATGATCACATCGTGTCGAGCCTCGACATTTCCAATCTCAACATCTCCGGGGCCTTCCCCCTTCTGATTCACAACCTAACCAACCTTCGCTCTCTCAACATTTCCAACAATCAGCTCACCGGCCAACTCCACTGGAACTATTCTCTCCTCAAACGCCTCCAACGGCTCCTGCCCCAACTTACCAGCCTAAAGCACTTGAATCTCGGCGGCAATTTCTTCTCCGGCCCAATCCCGCCAACCTACGGTGATATGGTGGAGCTCACTTTTCTCTCCCTTGCCGGCAATGACTTGAGCGGTCCCATTCCCACTGAGTTGGGCAACCTTACAAATCTCCAGCGGCTTTATTTGGGATACTACAATCAGTTTGAGGGTGGAATACCCCCTCAACTCGGAAACCTTGTGAATTTGAATCATCTCGACCTTGCCAGTTGTAGCTTACGAGGCCCAATTCCACCCGAGTTGGGGAATCTCAACCAGTTAAACACACTGTTCTTGCAGACAAATCAGCTCAGTGGCTCAATTCCCCCCCGGTTGGGCAACTTGAGCAACTTGGTTTCGCTTGACCTCTCCAACAACGAATTAACAGGAGAGATCCCCCTTGAACTTGGCAACCTCCGCCAGCTTTCCCTCCTGAGCTTTTTCATCAACAAGTTTCACGGGGAGATTCCTCATGTTCTAGCCAATCTTCCCAACTTGGAGGTTTTGAAGTTGTGGCAAAATAACTTCACTGGAGCCATTCCATCAAAGCTTGGTCAGAATGGGAGATTGACTGAGCTTGACTTGTCCACCAACAAGCTCACAGGACTGGTTCCACAGCGTCTGTGCCTGGGAGGAAGGCTGAACATCTTGATTTTACTCAACAATTTTCTGTTCGGGCCTGTGCCGCGTGATCTAGGACGATGTCAGGCGCTTGTAAGAGTTCGGATGGGTCAGAATTACTTGACCGGATCAATCCCAGAGGGGCTGCTATACTTGCCACAGCTCTCCCTTGTGGAATTTCAGAACAACTACCTGAGTGGACCCCTTCCACAAGGCATATTGGCAATGACATCGAAACTCGGCCTCATAAACCTTTCCAACAATCGCCTTTCGGGATCCCTTCCCACCTCCATTGAAACTTCACGAACTTGCAGAATCTGCTTGTGGAATCCCGGGGGAATTGGGTACGTGTGTGTCCTCACTTATCTGGATTTGAGCCTGAATCAGCTAAGCTCTGAGATCCCAATTGCACTCTCGCAGATTCGAATCTTGAATTACCTAAACCTGTCTTGGAACCATCTAAACCAGAGCCTCCCGAGGGAAATTGGGTCCATAAAGAGCTTGACCTGCGCGGACTTCTCCCACAATAACTTGTCGGGCGGTATACCCGAAAGTGGGCAGTTTTTACTGTTCAATTGGACATCCTTCGAGGGGAACCCTCAACTGTGTGGTGGATCCTCAAGCTGCAGCAGCAGTAAGGAGGAGGAGGCCGAGACAAGATCATCGTCAACCCGAAATGGGAACAAATATAAGCTGGTGTTTGCGTTGGGACTACTGGCGTGTTCGGTAATATTCGCGACAGTGGCAATCATTCAAACAAGGAAGGCGAAGAAGAAGAAGAAGTCAAGGGGTTGGTGGAAGGTAGCAACATTCCAGAAGGTTTCATTTGGGAGCAAGGAGATCGTGGAAGGTGGAGCTGGAGTTGTGTACAAAGGAACAATGCAGAGTGGAGAAGAGGTAGCCATCAAGAAGCTGTTGGGGGGCGGGTCCTCCCACGACAACGGCTTGTCCGCGGAGATACAGACGCTGGCCAAGATTCGGCACAGGAACATAGTGAGGCTGCTGGCATTCTGCTCCAACAAGGACACCAATCTGCTGGTGTACGAGTACATGCCCAATGGAAGCTTGGGGGCAGTGCTCCATGGGAAGAGGGGAGCTTCTCTCCAATGGGAGACCAGGCTGAGCATAGCCATGGAAGCGGCCAAAGGGCTAGCCTACTTGCACCACGACTGCTCCCCCCTCATCATTCACAGAGACGTCAAGTCCAACAACATTTTGCTCAACTCCGACTACGAGGCTCATGTCGCCGACTTTGGCCTCGCCAAGTTCTTCAACCACAATGGAGCATCCGAGTGCATGTCTGTCATCGCCGGTTCATACGGTTATATTGCTCCAGAATATGCATACACATTAAAAGTGGATGAAAAAAGTGATGTCTACAGTTTTGGAGTGGTGTTGTTGGAGCTTATTACAGGGCGGAAGCCTGTGGGCAATTTTGGGGAAGATGGTTTGGACATTGTCCAATGGACTAAAATCCAAACCAACTCTATCAAAGAAGGAGTTGTTAATATACTGGATCAAAGGTTGAGTAACATACCAATAAATGAGGCAGAGCAAATGTTTTTTGTAGCTATGTTATGCGTTCAAGAACATATGATTTTGCATCTTTATGCAAACATTGGTATTGGTATTGGTATTGGTATTGCTTTTGCTTTATTAGTTTCTCTCTTTTTGTAA 2733 48.48 MKLDLVLKLKLELKLLLITLLLIPCASSTSLSLIKAQACILVSIKQSFGKPAGPLLLDWNASNYSSLCSWTGVQCQDDDDDHIVSSLDISNLNISGAFPLLIHNLTNLRSLNISNNQLTGQLHWNYSLLKRLQRLLPQLTSLKHLNLGGNFFSGPIPPTYGDMVELTFLSLAGNDLSGPIPTELGNLTNLQRLYLGYYNQFEGGIPPQLGNLVNLNHLDLASCSLRGPIPPELGNLNQLNTLFLQTNQLSGSIPPRLGNLSNLVSLDLSNNELTGEIPLELGNLRQLSLLSFFINKFHGEIPHVLANLPNLEVLKLWQNNFTGAIPSKLGQNGRLTELDLSTNKLTGLVPQRLCLGGRLNILILLNNFLFGPVPRDLGRCQALVRVRMGQNYLTGSIPEGLLYLPQLSLVEFQNNYLSGPLPQGILAMTSKLGLINLSNNRLSGSLPTSIETSRTCRICLWNPGGIGYVCVLTYLDLSLNQLSSEIPIALSQIRILNYLNLSWNHLNQSLPREIGSIKSLTCADFSHNNLSGGIPESGQFLLFNWTSFEGNPQLCGGSSSCSSSKEEEAETRSSSTRNGNKYKLVFALGLLACSVIFATVAIIQTRKAKKKKKSRGWWKVATFQKVSFGSKEIVEGGAGVVYKGTMQSGEEVAIKKLLGGGSSHDNGLSAEIQTLAKIRHRNIVRLLAFCSNKDTNLLVYEYMPNGSLGAVLHGKRGASLQWETRLSIAMEAAKGLAYLHHDCSPLIIHRDVKSNNILLNSDYEAHVADFGLAKFFNHNGASECMSVIAGSYGYIAPEYAYTLKVDEKSDVYSFGVVLLELITGRKPVGNFGEDGLDIVQWTKIQTNSIKEGVVNILDQRLSNIPINEAEQMFFVAMLCVQEHMILHLYANIGIGIGIGIAFALLVSLFL 910
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
14 24924622 24929077 - Sed0018716.1 Sed14g1706 737424
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sed14g1706 910 Pfam Protein kinase domain 631 835 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Sed14g1706 910 Gene3D Transferase(Phosphotransferase) domain 1 704 885 - -
Sed14g1706 910 Gene3D Ribonuclease Inhibitor 201 280 IPR032675 -
Sed14g1706 910 Gene3D Ribonuclease Inhibitor 35 200 IPR032675 -
Sed14g1706 910 Gene3D Phosphorylase Kinase; domain 1 633 703 - -
Sed14g1706 910 SUPERFAMILY L domain-like 123 450 - -
Sed14g1706 910 ProSitePatterns Serine/Threonine protein kinases active-site signature. 747 759 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Sed14g1706 910 ProSiteProfiles Leucine-rich repeat profile. 262 285 IPR001611 GO:0005515(InterPro)
Sed14g1706 910 Pfam Leucine Rich Repeat 107 122 IPR001611 GO:0005515(InterPro)
Sed14g1706 910 Pfam Leucine Rich Repeat 141 161 IPR001611 GO:0005515(InterPro)
Sed14g1706 910 Pfam Leucine Rich Repeat 472 491 IPR001611 GO:0005515(InterPro)
Sed14g1706 910 Pfam Leucine Rich Repeat 166 187 IPR001611 GO:0005515(InterPro)
Sed14g1706 910 Pfam Leucine Rich Repeat 334 353 IPR001611 GO:0005515(InterPro)
Sed14g1706 910 Pfam Leucine Rich Repeat 262 284 IPR001611 GO:0005515(InterPro)
Sed14g1706 910 Pfam Leucine Rich Repeat 214 236 IPR001611 GO:0005515(InterPro)
Sed14g1706 910 Pfam Leucine Rich Repeat 434 451 IPR001611 GO:0005515(InterPro)
Sed14g1706 910 FunFam Leucine-rich repeat receptor-like protein kinase 159 251 - -
Sed14g1706 910 SUPERFAMILY Protein kinase-like (PK-like) 631 834 IPR011009 -
Sed14g1706 910 PANTHER LEUCINE-RICH REPEAT RECEPTOR PROTEIN KINASE EMS1 296 882 IPR051564 GO:0016020(PANTHER)
Sed14g1706 910 Gene3D Ribonuclease Inhibitor 286 565 IPR032675 -
Sed14g1706 910 ProSiteProfiles Protein kinase domain profile. 627 886 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Sed14g1706 910 SUPERFAMILY L domain-like 458 555 - -
Sed14g1706 910 PRINTS Leucine-rich repeat signature 108 121 - -
Sed14g1706 910 PRINTS Leucine-rich repeat signature 260 273 - -
Sed14g1706 910 FunFam Leucine-rich repeat receptor-like serine/threonine-protein kinase 703 887 - -
Sed14g1706 910 FunFam LRR receptor-like serine/threonine-protein kinase GSO1 295 567 - -
Sed14g1706 910 SMART serkin_6 627 875 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Sed14g1706 910 SMART LRR_typ_2 308 332 IPR003591 -
Sed14g1706 910 SMART LRR_typ_2 212 236 IPR003591 -
Sed14g1706 910 SMART LRR_typ_2 333 356 IPR003591 -
Sed14g1706 910 SMART LRR_typ_2 105 130 IPR003591 -
Sed14g1706 910 SMART LRR_typ_2 493 517 IPR003591 -
Sed14g1706 910 SMART LRR_typ_2 163 187 IPR003591 -
Sed14g1706 910 SMART LRR_typ_2 260 284 IPR003591 -
Sed14g1706 910 Pfam Leucine rich repeat N-terminal domain 40 75 IPR013210 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Sed14g1706 Sed-Chr14:24924622 Sed11g0064 Sed-Chr11:603717 1.20E-56 dispersed
Sed14g1705 Sed-Chr14:24919738 Sed14g1706 Sed-Chr14:24924622 1.60E-232 tandem
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
80222 PF00069 Pkinase 1.80E-43 CL0016 Sed PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sed14g1706 - - - 0.0