Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Tan01g0034 | ATGGGTAGTGTTGTTGTATTAGTAAGCAAGCAAATTAAAGTGAAAGTGGAAAAGAATAGAATAAGAATGGGATCCAGTGGTTTAGAAGAGACACAGATGACCCCAACCCAAGTGAGCGATGAAGAAGAAGAAGAAGCACAGCTGTTCGCAATGCAGTTAGCAAGTGCCTCGGTTCTTCCGATGGTGCTGAAGGCCGCGATCGAGCTGGACGTGCTGGAGATCATTGCCGGGGCTGGGGAGGGTGCTTTGTTGTCCCCATACCAAATAGCTTCCCAGCTCTCAGGCTCCAAAAACCCTGAGGCGGATGTGGCTTTGGACAGAATCCTCCGCCTGCTGGCTAGCTACTCCATACTCACTTGCACCCTCAATAATACTCTCCCAGATGGCAACCTACAAAGGCTCTACGGCCTCGCCCCTGTCTCCAAGTTCTTGATCAAGAATCATGATGGCGTCTCCATTGCCCCACTCTGTCTCATGAATCAGGACAAGGTCCTCATGGAGAGCTGGTACCATTTGAAAGATGCGGTACTTGAAGGAGGAATTCCATTCAACAGAGCATACGGAATGACGGCGTTCGATTACCATGGAACGGATCCGAGATTCAACAAGGTGTTCAACAGGGGAATGTCGGACCATTCTACCATTACAATGAAGAAGATTCTAGAAACCTACAAAGGGTTCGAAGGGCTTAATTCAGTGGTGGATGTGGGGGGTGGGACTGGAGCTGTTCTGAACATGATCGTTTCCAAGTACCCTTCTATTAGGGGAATCAACTTCGACCTCCCTCATGTGATTCAAGATGCCCCTGCCTACCCAGGCGTCCAACAGGTTGGGGGCGACATGTTTGTCAGCGTCCCAAAGGGAGATGCTATTTTCATGAAGGTATCTCTATTAATCAAAATTCCAATCAAATCCAAAACTAAACTAAACGCTTTTTCTTTACCTTTGCGCAGTGGATCTGCCACGATTGGAGCGACCAACACTGCCTCCAATTCTTGA | 999 | 48.35 | MGSVVVLVSKQIKVKVEKNRIRMGSSGLEETQMTPTQVSDEEEEEAQLFAMQLASASVLPMVLKAAIELDVLEIIAGAGEGALLSPYQIASQLSGSKNPEADVALDRILRLLASYSILTCTLNNTLPDGNLQRLYGLAPVSKFLIKNHDGVSIAPLCLMNQDKVLMESWYHLKDAVLEGGIPFNRAYGMTAFDYHGTDPRFNKVFNRGMSDHSTITMKKILETYKGFEGLNSVVDVGGGTGAVLNMIVSKYPSIRGINFDLPHVIQDAPAYPGVQQVGGDMFVSVPKGDAIFMKVSLLIKIPIKSKTKLNAFSLPLRSGSATIGATNTASNS | 332 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
1 | 589373 | 593904 | + | Tan0022749.2 | Tan01g0034 | 737458 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Tan01g0034 | 332 | FunFam | Os12g0199500 protein | 146 | 277 | - | - | |
Tan01g0034 | 332 | SUPERFAMILY | S-adenosyl-L-methionine-dependent methyltransferases | 149 | 297 | IPR029063 | - | |
Tan01g0034 | 332 | FunFam | Caffeic acid 3-O-methyltransferase | 25 | 144 | - | - | |
Tan01g0034 | 332 | Gene3D | Vaccinia Virus protein VP39 | 145 | 299 | IPR029063 | - | |
Tan01g0034 | 332 | ProSiteProfiles | SAM-dependent O-methyltransferase class II-type profile. | 51 | 332 | IPR016461 | GO:0008168(InterPro) | |
Tan01g0034 | 332 | SUPERFAMILY | Winged helix DNA-binding domain | 40 | 147 | IPR036390 | - | |
Tan01g0034 | 332 | Gene3D | - | 28 | 144 | IPR036388 | - | |
Tan01g0034 | 332 | Pfam | O-methyltransferase domain | 169 | 295 | IPR001077 | GO:0008171(InterPro) | |
Tan01g0034 | 332 | PANTHER | O-METHYLTRANSFERASE | 45 | 297 | IPR016461 | GO:0008168(InterPro)|GO:0008171(PANTHER)|GO:0008757(PANTHER)|GO:0019438(PANTHER)|GO:0032259(PANTHER) | |
Tan01g0034 | 332 | Pfam | Dimerisation domain | 61 | 113 | IPR012967 | GO:0046983(InterPro) |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Tan01g0034 | Tan-Chr1:589373 | Tan01g1865 | Tan-Chr1:19864728 | 1.10E-77 | dispersed | |
Tan01g0033 | Tan-Chr1:589373 | Tan01g0034 | Tan-Chr1:589373 | 1.20E-163 | tandem |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Tan01g0034 | K13066 | - | csv:101204109 | 456.832 |