Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan01g0061 ATGGCTGCTTTCGCCTCACTGCCCCTAACTTCGTCTTCGTCTTCTTTGCATCCTGTTCTCCAATTCTCACCTCTTGTATTCTCCTCAAAAGTTCTATATGACCCAAGTTCCTATCAGTATCGCCTCACAGTCGGATCAATCAGACATGCAAAGAAAAAATTTACCTCTCAGACCAACCCAAGGAGCCTGATAATCCTTGGCGCAGCAACAAAACAAGCAAAAACACCAGCTGAGGAGGATTGGAAGGTGAAGAGGGAGCTTCTGCTGCAGAAAAGGGTAAGGAGTGTTGATGCGAATGAAGCTCTGCGGCTTCAGAAGGAAAACAACTTTGTTATTCTTGATGTAAGGCCAGAAGCAGAATTCAAAGAGGGCCATCCACAAGGTGCCATTAATGTGCAAATCTACAGGCTTATAAAGGAGTGGACAGCATGGGACATCGCCAGGAGAGCTGCATTTGCATTTTTTGGCATCTTTTCGGGTACAGAAGAAAACCCAGAATTCTTGCAAAGTGTAGAATCTAAAATAGATAAAGATGCCAAAATAATAGTAGCATGCTCATCAGGTGGAACAATGAAACCTACCCAGAATCTCCCAGAAGGTCAACAATCAAGGTCCTTGATAGCAGCTTACTTGTTGGTTCTCAATGGCTACACCAACGTATTTCACTTGGAAGGTGGTCTCTACAATTGGTTCAAAGAAGGATTGCCTGTAGTTTCAGAAGAATAA 726 43.53 MAAFASLPLTSSSSSLHPVLQFSPLVFSSKVLYDPSSYQYRLTVGSIRHAKKKFTSQTNPRSLIILGAATKQAKTPAEEDWKVKRELLLQKRVRSVDANEALRLQKENNFVILDVRPEAEFKEGHPQGAINVQIYRLIKEWTAWDIARRAAFAFFGIFSGTEENPEFLQSVESKIDKDAKIIVACSSGGTMKPTQNLPEGQQSRSLIAAYLLVLNGYTNVFHLEGGLYNWFKEGLPVVSEE 241
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 740861 742605 - Tan0000156.1 Tan01g0061 737485

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Tan01g0061 241 Gene3D - 80 237 IPR036873 -
Tan01g0061 241 PANTHER RHODANESE-LIKE DOMAIN-CONTAINING PROTEIN 14, CHLOROPLASTIC-RELATED 10 240 IPR043186 GO:0009507(PANTHER)
Tan01g0061 241 CDD RHOD 100 230 - -
Tan01g0061 241 SMART rhod_4 96 236 IPR001763 -
Tan01g0061 241 ProSiteProfiles Rhodanese domain profile. 106 239 IPR001763 -
Tan01g0061 241 FunFam Rhodanese-like domain-containing protein 14, chloroplastic 80 238 - -
Tan01g0061 241 Pfam Rhodanese-like domain 98 232 IPR001763 -
Tan01g0061 241 SUPERFAMILY Rhodanese/Cell cycle control phosphatase 91 238 IPR036873 -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan01g0061 - - - - 0.0
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi16g997 . Blo15g00078 . . . Bpe07g01026 . . Cmo16g00036 . . . . . Sed07g0876 . Cpe14g00024 Bhi01g01519 Tan01g0061 Cmetu06g0246 . Hepe07g0039 Mch10g0037 . . . . . . . . . . . Cone15ag0001 . . . Cme06g01169 . . Bda06g00795 . . . . Bma12g01221 . . . Cma16g00031 . Car16g00029 . . . . . . . . . . Cla05g00987 Cam05g1078 Cec05g1086 Cco05g1080 Clacu05g1072 Cmu05g1022 Cre05g1096 . Csa03g01965 . .
       

Syn-Families

Select Gene Event_type S_start S_end Function Ath_gene Identity(%) E-value Score
Tan01g0733 . 59 376 Sulfurtransferasese/Rhodanese AT1G79230 74.2 2.9e-144 508.8
Tan01g0734 . 59 376 Sulfurtransferasese/Rhodanese AT1G79230 74.2 2.9e-144 508.8
Tan01g0735 . 59 376 Sulfurtransferasese/Rhodanese AT1G79230 74.2 2.9e-144 508.8
Tan01g0733 . 59 323 Sulfurtransferasese/Rhodanese AT1G16460 74.7 6.9e-115 411.0
Tan01g0734 . 59 323 Sulfurtransferasese/Rhodanese AT1G16460 74.7 6.9e-115 411.0
Tan01g0735 . 59 323 Sulfurtransferasese/Rhodanese AT1G16460 74.7 6.9e-115 411.0
Tan05g2307 . 19 310 Sulfurtransferasese/Rhodanese AT5G23060 58.3 3.9e-77 285.8
Tan10g0136 . 1 433 Sulfurtransferasese/Rhodanese AT4G01050 51.6 9.4e-113 404.8
Tan09g0069 . 6 597 Sulfurtransferasese/Rhodanese AT1G09280 64.8 4.5e-228 788.1
Tan04g1449 . 86 438 Sulfurtransferasese/Rhodanese AT2G40760 76.2 1.3e-156 550.4
Tan07g1153 . 74 418 Sulfurtransferasese/Rhodanese AT1G17850 68.6 3.1e-152 535.8
Tan07g1154 . 74 429 Sulfurtransferasese/Rhodanese AT1G17850 66.3 9.4e-149 524.2
Tan07g1155 . 63 364 Sulfurtransferasese/Rhodanese AT1G17850 67.8 2.0e-130 463.4
Tan07g1156 . 74 259 Sulfurtransferasese/Rhodanese AT1G17850 64.2 3.1e-67 253.4
Tan03g0168 . 31 229 Sulfurtransferasese/Rhodanese AT2G42220 74.9 6.6e-85 311.2
Tan08g2136 . 334 545 Sulfurtransferasese/Rhodanese AT3G08920 59.0 1.1e-67 253.8
Tan09g2314 . 1 293 Sulfurtransferasese/Rhodanese AT4G24750 67.9 3.9e-111 398.7
Tan07g0806 . 67 292 Sulfurtransferasese/Rhodanese AT5G19370 65.2 9.3e-84 307.8
Tan01g1738 . 117 468 Sulfurtransferasese/Rhodanese AT5G55130 72.2 4.4e-149 525.0
Tan01g0061 . 61 241 Sulfurtransferasese/Rhodanese AT4G27700 79.6 2.6e-78 289.3
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0011827 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 30