Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Tan01g0142 | ATGGTATGCAGCTACAATATAAGGAATGTGATTGCTCAGGCTGGACATGTAGGAATAATCAGCAGAAGGGTTCAAACCAACAATATCTGGAGGAGTTTGCCTTCCAATCTTGGATTTGTTCACACCTGGAAACGTGAATATAGAACGGGTCTCATGATGATGGTCGATACAGGTGCATCGGATAATCGCGGGCTGGTTGTTGATAAGCATCCAGAGAAAGATGAAGATGGTGGCTATGCCAGTGGAGGGTGGAAAAGTGAAGATGGGAAACTTAGTTGGGGGTATTCAAGTTTCAGAGGAAAGAGGGCAACCATGGAAGATTTCTTTGATATTAAAATGTCGAAGGTTGATGGTCAAACGGTCTGCCTCTTTGGCATTTTTGATGGTCACGGTGGATCCCGTGCTGCAGAGTTTTTGAAGGACCATCTCTTTGAGAATCTGATGAAGCACCCAAAATTTTTGAAGGATACCAAATTAGCTATCAGTGAAACGTATCAACAGACAGATGCTGAATTTTTAAATTCGGAAAAAGATACTTTAAGAGACGATGGCTCTACAGCTTCGACAGCTTTGCTAGTTGGCAATCATCTATATGTTGCCAATGTTGGAGATTCGCGTGCTATAATATCAAAGGGGGGTGAAGCAATCCCTCTTTCTGAGGACCATAAACCAAATAGAACTGACGAGCGGAGGAGAATTGAAAATGCCGGTGGTGTTGTCATGTGGGCTGGCACTTGGAGGGTTGGAGGAGTATTAGCAATGTCCCGTGCTTTCGGTAACAAGATGTTGAAGCAGTTCGTTGTGGCTGATCCCGAGATTCAGGATCTTGAAGTAGACAAGGACATCGAGCTGCTCGTTCTCGCAAGCGATGGACTTTGGGATGTGGTACGCAATGAGGATGCAGTACTAGTTGCAGGGAAGGAAGAAGAACCCGAGGCAGCTGCTCGGAAACTAACCGAAGCAGCGTTTACCCGTGGTAGCGCTGACAACATAACATGCATTGTGGTGAAGTTTCATCACGACAATGCAGGTCCTGCTGCCTATACTCGAGAAAACAACTAA | 1062 | 45.29 | MVCSYNIRNVIAQAGHVGIISRRVQTNNIWRSLPSNLGFVHTWKREYRTGLMMMVDTGASDNRGLVVDKHPEKDEDGGYASGGWKSEDGKLSWGYSSFRGKRATMEDFFDIKMSKVDGQTVCLFGIFDGHGGSRAAEFLKDHLFENLMKHPKFLKDTKLAISETYQQTDAEFLNSEKDTLRDDGSTASTALLVGNHLYVANVGDSRAIISKGGEAIPLSEDHKPNRTDERRRIENAGGVVMWAGTWRVGGVLAMSRAFGNKMLKQFVVADPEIQDLEVDKDIELLVLASDGLWDVVRNEDAVLVAGKEEEPEAAARKLTEAAFTRGSADNITCIVVKFHHDNAGPAAYTRENN | 353 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
1 | 1319155 | 1323538 | + | Tan0008497.1 | Tan01g0142 | 737566 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Tan01g0142 | 353 | PANTHER | PROTEIN PHOSPHATASE | 79 | 337 | IPR015655 | GO:0004722(PANTHER)|GO:0004722(InterPro)|GO:0006470(InterPro)|GO:0035970(PANTHER) | |
Tan01g0142 | 353 | SUPERFAMILY | PP2C-like | 89 | 339 | IPR036457 | - | |
Tan01g0142 | 353 | ProSitePatterns | PPM-type phosphatase domain signature. | 123 | 131 | IPR000222 | GO:0043169(InterPro) | |
Tan01g0142 | 353 | SMART | PP2C_4 | 82 | 336 | IPR001932 | - | |
Tan01g0142 | 353 | Pfam | Protein phosphatase 2C | 96 | 331 | IPR001932 | - | |
Tan01g0142 | 353 | CDD | PP2Cc | 94 | 338 | IPR001932 | - | |
Tan01g0142 | 353 | Gene3D | - | 84 | 343 | IPR036457 | - | |
Tan01g0142 | 353 | ProSiteProfiles | PPM-type phosphatase domain profile. | 92 | 338 | IPR001932 | - | |
Tan01g0142 | 353 | SMART | PP2C_SIG_2 | 74 | 338 | IPR001932 | - | |
Tan01g0142 | 353 | FunFam | Probable protein phosphatase 2C 76 | 84 | 344 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Tan01g0142 | Tan-Chr1:1319155 | Tan01g3523 | Tan-Chr1:100383347 | 1.80E-94 | dispersed | |
Tan06g2397 | Tan-Chr6:76260356 | Tan01g0142 | Tan-Chr1:1319155 | 1.30E-15 | dispersed | |
Tan09g1860 | Tan-Chr9:69871786 | Tan01g0142 | Tan-Chr1:1319155 | 7.30E-13 | dispersed | |
Tan01g0142 | Tan-Chr1:1319155 | Tan02g0200 | Tan-Chr2:1718196 | 1.30E-44 | transposed |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Tan01g0142 | K17506 | - | csv:101203681 | 678.322 |