Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan01g0164 ATGATGAAGAATAGCTTCATCTTCCTTGAAATTTTGTTGTTATTAGCGATCACCTTACCGGGGACTCTCACTGAGCCAGTTGAAGACAAGCAAGCTTTGCTTGATTTCTTCCATAATATCCCCCACTCACCATCTCTCAATTGGAATGAGAATAGTTCTGTGTGCAAAGCCTGGACAGGAGTGTTTTGCAACTCTGATGAGTCTAGAGTAGTGGCCATTCGATTACCTGGGACCGGTCTGCGCGGTCCGATCCCCGTGAATACTCTTAGCCGCCTATCTGCGCTTGAGATTCTAAGCCTTAGATTAAATAGGATATCAGGACCTTTCCCTTCTGATTTTTCCAACCTAGAAAGCTTGAGTTCCTTATATCTGCAATACAACAAGTTTTCTGGTCCTTTGCCTTTAGATTTTTCCGTTTGGAAGAACCTTAGTGTCATCGATCTATCGAACAATTTCTTTAATGGGAGTATTCCTCCTTCTATCTCAAAGTTGAGTCATCTGACAGTTCTGAATCTTGCAAACAACTCGTTTTCAGGCAAAATACCGGACCTTGATATTCCAAGTTTGCAACGGTTAGATTTGTCCAATAATAATCTTACAGGAAATGTGCCTCATTCTCTTCAAAGATTTCCAAGTTGGGTGTTCTCCGGTAACAATGTTACCAAAGAACATGGTGCAATTCCCCCATCTTTTCCGCTCCAGCCTCCCAGTGCTCAACCGACAAGAAAAGGAAAAGGACTAGGTGAATCTGCAATATTGGGTATTGCAATTGGTGGTTCTGTTGTTGGGTTTATTTTGCTAGCTGTTTTGTTGACTGCTTGCTGGTTGAAAAAGGGAAAAGAAAATGCAAGTTCCACCATGGAGACCAAAAAGAAGGAAACATCTGTGAAGAAAAGGGGTTTTGAGAGCCAAGAACAAAAGAACAACCTTAATTTCTTCCGGGATTCTAATCTTGCATTTGACTTGGAAGACCTGTTGAGAGCGTCTGCCGAGGTTCTTGGCAAGGGAACCTTTGGAGTGAGCTACAAGGCAGCTTTGGAGGACTCGATGACTGTGGTAGTGAAGAGGCTGAATCAAGTGACCGTTGGAAAACGAGAGTTTGAACAGCAGATGGAGTTGATTGGAAACATTAAGCACGAGAACATCGTTTCTTTAAGAGCATACTATTATTCAAAGGATGAGAAGCTTATGGTCTATGACTACTATGGACAAGGGAGTGTGTCTGCAATGCTACACAGTAAAGAAGGAGATGGTTTGCCTGTGTTAGATTGGGATGCTCGGATGAAAATAGTTATCGGAGCGGCTCGAGGCCTTGCTCATATTCATACCAAAAATGGTGGAAAATGTTCCCATGGAAACGTTAGAGCCTCAAACATTTTCCTCAACTCTAAAGGATATGGATGTGTATCTGATGTCGGTTTGGCCGTGTTGATGAATTCAATTCCACTCCCAGCCACCAGAACTCCTGGTTACCGAGCCCCCGAAGTGACCGACACTCGAAGAGCATCAGAAGCAGCTGATGTCTACAGTTTCGGGGTGGTGCTGCTGGAACTCCTGACTGGAAAATGTCCCATTCATGTTGAAGGTTGTAATGAAGTTGTGAATTTGGTGAGGTGGGTGAACTCTGTGGTGAGGGAGGAATGGACAGCAGAAGTGTTTGATGTGGAGCTTCTCAGGTATCCAAATATAGAAGAAGAAATGGTGGAGATGCTGCAAATTGGGTTGTCTTGTGTTGCCAAAATGCCCGAGCAGAGGCCAAAAATGATGGATATAGCGTCGAGAATCGAGCAAGTTCGACAACTGAGTACCGGAACCCGACCATCATCCGGGTCAAAATCAGCGTATTCGACTCCAGTTCATGTAATGGAAATCGGTTCTTCCTCATATTCACATTGA 1896 43.83 MMKNSFIFLEILLLLAITLPGTLTEPVEDKQALLDFFHNIPHSPSLNWNENSSVCKAWTGVFCNSDESRVVAIRLPGTGLRGPIPVNTLSRLSALEILSLRLNRISGPFPSDFSNLESLSSLYLQYNKFSGPLPLDFSVWKNLSVIDLSNNFFNGSIPPSISKLSHLTVLNLANNSFSGKIPDLDIPSLQRLDLSNNNLTGNVPHSLQRFPSWVFSGNNVTKEHGAIPPSFPLQPPSAQPTRKGKGLGESAILGIAIGGSVVGFILLAVLLTACWLKKGKENASSTMETKKKETSVKKRGFESQEQKNNLNFFRDSNLAFDLEDLLRASAEVLGKGTFGVSYKAALEDSMTVVVKRLNQVTVGKREFEQQMELIGNIKHENIVSLRAYYYSKDEKLMVYDYYGQGSVSAMLHSKEGDGLPVLDWDARMKIVIGAARGLAHIHTKNGGKCSHGNVRASNIFLNSKGYGCVSDVGLAVLMNSIPLPATRTPGYRAPEVTDTRRASEAADVYSFGVVLLELLTGKCPIHVEGCNEVVNLVRWVNSVVREEWTAEVFDVELLRYPNIEEEMVEMLQIGLSCVAKMPEQRPKMMDIASRIEQVRQLSTGTRPSSGSKSAYSTPVHVMEIGSSSYSH 631
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 1496340 1499705 - Tan0011064.1 Tan01g0164 737588
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan01g0164 631 MobiDBLite consensus disorder prediction 283 301 - -
Tan01g0164 631 FunFam Probable inactive receptor kinase RLK902 26 185 - -
Tan01g0164 631 Gene3D Phosphorylase Kinase; domain 1 291 401 - -
Tan01g0164 631 FunFam pollen receptor-like kinase 1 296 401 - -
Tan01g0164 631 Pfam Leucine Rich Repeat 166 183 IPR001611 GO:0005515(InterPro)
Tan01g0164 631 Pfam Leucine Rich Repeat 188 209 IPR001611 GO:0005515(InterPro)
Tan01g0164 631 Pfam Leucine Rich Repeat 142 164 IPR001611 GO:0005515(InterPro)
Tan01g0164 631 SUPERFAMILY Protein kinase-like (PK-like) 331 595 IPR011009 -
Tan01g0164 631 Gene3D Ribonuclease Inhibitor 26 235 IPR032675 -
Tan01g0164 631 MobiDBLite consensus disorder prediction 282 301 - -
Tan01g0164 631 Gene3D Transferase(Phosphotransferase) domain 1 403 613 - -
Tan01g0164 631 Pfam Protein tyrosine and serine/threonine kinase 331 594 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Tan01g0164 631 FunFam protein STRUBBELIG-RECEPTOR FAMILY 8 402 608 - -
Tan01g0164 631 PANTHER OS05G0588300 PROTEIN 8 610 IPR050994 -
Tan01g0164 631 ProSiteProfiles Protein kinase domain profile. 327 598 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Tan01g0164 631 SUPERFAMILY L domain-like 38 213 - -
Tan01g0164 631 Pfam Leucine rich repeat 85 129 IPR001611 GO:0005515(InterPro)
Tan01g0164 631 Pfam Leucine rich repeat N-terminal domain 28 64 IPR013210 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan01g0164 Tan-Chr1:1496340 Tan07g0435 Tan-Chr7:8203060 5.70E-160 dispersed
Tan01g0164 Tan-Chr1:1496340 Tan01g0165 Tan-Chr1:1496340 8.20E-308 tandem
Tan01g0164 Tan-Chr1:1496340 Tan07g1580 Tan-Chr7:66979630 9.40E-171 wgd
Tan01g0164 Tan-Chr1:1496340 Tan07g0434 Tan-Chr7:8202903 5.70E-160 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
66974 PF07714 PK_Tyr_Ser-Thr 8.10E-33 CL0016 Tan PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan01g0164 - - - 0.0