Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Tan01g0227 | ATGCCTTCATGGTGGGGGAAGCCATCATCCAAAGAAGTAAAGAAGAAAACGAGCAAGGAAAGTTTCATTGACTCATTACACCGTAAGTTTAAGAATTCACCTGAAGGTAAAGTAAACAGCAGATCAGGAAGTTCTCGTAGACGTGGTGGTGACACTATATCTGAGAAGGGGTCTAAATCACCTTTATCAAGATCACCATCACCTTCCAAAGAAGTATCTAGATGTCAAAGTTTTGCTGAAAGATCACGTTCTCACCAACTTCCACTTCCAGATCTGCACCCTGTAGGTGTAGGTCGCACAGACTCTGGGATTAGTGTGACAGCAAAATCAAAATTAGAGAGAAGCTCCAAGACATCTTCATTCCTACCCCTCCCTAGACCTGCATGTATCCGAAGTAGGCCAGATCCTGCAGATTTGGATGGAGATTTGGTCACTGGTTCAGTCTCTGGTGAGTCCTCGAGTGATAGTGATGATCCCAATGATTCACGTCAACGTAGTCCTCAGGCAACTGACTTTGACATTGGGACTAGAACTGTGATAGGTTCTACTGAACCTAGTGCAACTCTCAAGGACCAGTCTTCTACTGTCGTGCAAATAAATTCAAAAGAGGGCAAGAAAGTGGAAAGTCTTTCATTTCCTCATAAGAATCCTTCAATACCTAAACGGAGGCCTTTAAGCAGCAATGTAACAAATCTACAAGTTCCTCGTCATGGGGCTTTCTTTAGCGCTCCAGATAGTTCCATGTCTAGTCCCTCTAGAAGTCCTATGAGGGTATTTAGCACCGAGCAAGTCATGAACACTGCTGTTTGGGCTGGAAAGTCTCACCCAGATGTCATTTTGGGTGGGTCTGGCCACTGCTCCAGTCCTGGTTCTGGTCACAATTCAGGGCACAACTCTATGGGAGGTGATATGGCAGGCCACTTCTTTTGGCAACAAAGTAGGGGTAGCCCTGAATATTCTCCAGTACCTAGTTCTAGAATGACTAGCCCCGGCCCAAGCTCCAGAATTCAAAGTGGTGCTGTTACACCTATTCATCCTAGAGCAGGAGCTCCACCTGCTGAGTCACAAACTTGCTGGCCTGATGAGAAACAAACTCATCGTTTGCCTCTTCCTCCCATAGCAATCTCAATCTCTTCTCCATTCTCTCATTCAAATTCAGCAGTGACATCTCCTTCAGTGCCTAGGAGTCCAGGAAGGACAGAGACTCCAGCAAGCCCAGGTTCACGCTGGAAAAAGGGGAAGCTACTGGGTCAGGGAACATTTGGGCATGTATATGTTGGTTTTAATAGCGAAAGCGGAGAAATGTGTGCAATGAAGGAGGTCACGTTATTTTCTGATGATGCAAAGTCTAAGGAAAGTGCTAAACAATTAATGCAGGAAATTGCTTTACTGAGTCGTTTACGGCATCCCAACATCGTGCAATATTATGGTTCGGAAACAGTGGGCGATAAACTCTATATATATCTGGAATATGTATCTGGTGGTTCCATCTATAAATTACTACAAGAATATGGACAATTTGGGGAATTGGCAATTCGTAGTTATACTCAACAAATACTATCAGGGCTTGCATATTTGCATGCTAAAACTACAGTGCACAGGGATGTTAAAGGAGCAAACATACTTGTTGACCCAAATGGTCGTGTTAAATTGGCAGACTTTGGGATGGCGAAGCATATCACAGGCCAATCATGTCCACTGTCGTTCAAGGGCAGCCCTTACTGGATGGCACCTGAGGTCATAAAGAATTCAAATGGTTGCAACCTTGCCGTTGATATTTGGAGTCTTGGATGCACTGTTCTGGAGATGGCTACTACAAAGCCACCTTGGAGCCAGTATGAAGGGGTTGCTGCGATGTTTAAGATTGGTAATAGCAAAGAACTCCCAGTAATTCCAGAGCACCTCTCAGATGATGGGAAGGATTTTGTGAGACTATGTCTGCAACGAAACCCGCATCATCGACCTACAGCTGCTCAACTTTTGGATCATCCTTTTGTCAAATATGCTGCACCTGTAGAGAGGTCTATTTTGAGCTCTGAACCTTCTGATGCAACTCCTGGGGTTACAAACGGAGTGAAAACTTTGGGTATTTGCCAATCACGGATTACTTCTGTGGACTCAGATAGTAGACTTGCAGTTCATTCTTCAAGAGTCTCAAAAGCTATTCTTCATGCCAGTGAAATCAATATTCCCAGAAACATATCATGTCCTGTTTCACCAATTGGAAGCCCTCTTTTGCACTCACGTTCGCCTCAACATCCCAGTGGAAGAATGTCTCCTTCACCTATATCAAGTCCACGAACCACTTCGGGCTCATCAACACCTTTGACAGGATGTGGTGGCGCAATTCCTTACAACCACCTGAAACAAGCTATATACTTGCAAGAGGGATTTGGAAGCATGCCGAAGTCCTTAAATAATAGTCCATACAGCAGTGGTCTCTCCTTCCACGATTCAAATCCCGATATTTTTCGAGGGTTGCAGCCTGGGGCTCCCATCTTCTCTGAAATGATACCAGAAAATGATATTTTGGGAAAGCAGGTCGGAGTCGGAAGGGTTGCTTATGGTGAATTGTATGATGGACAGCAGGTCTTGGCTGATCGAGTGTCTCGACAGCTCCTGAGGGATCATGTTAAAACAAACCCTTCTCTTGATTTGAGTCCTAGCCCTACATTGTCTGGCCGCATGAATGGTATCTGA | 2700 | 44.81 | MPSWWGKPSSKEVKKKTSKESFIDSLHRKFKNSPEGKVNSRSGSSRRRGGDTISEKGSKSPLSRSPSPSKEVSRCQSFAERSRSHQLPLPDLHPVGVGRTDSGISVTAKSKLERSSKTSSFLPLPRPACIRSRPDPADLDGDLVTGSVSGESSSDSDDPNDSRQRSPQATDFDIGTRTVIGSTEPSATLKDQSSTVVQINSKEGKKVESLSFPHKNPSIPKRRPLSSNVTNLQVPRHGAFFSAPDSSMSSPSRSPMRVFSTEQVMNTAVWAGKSHPDVILGGSGHCSSPGSGHNSGHNSMGGDMAGHFFWQQSRGSPEYSPVPSSRMTSPGPSSRIQSGAVTPIHPRAGAPPAESQTCWPDEKQTHRLPLPPIAISISSPFSHSNSAVTSPSVPRSPGRTETPASPGSRWKKGKLLGQGTFGHVYVGFNSESGEMCAMKEVTLFSDDAKSKESAKQLMQEIALLSRLRHPNIVQYYGSETVGDKLYIYLEYVSGGSIYKLLQEYGQFGELAIRSYTQQILSGLAYLHAKTTVHRDVKGANILVDPNGRVKLADFGMAKHITGQSCPLSFKGSPYWMAPEVIKNSNGCNLAVDIWSLGCTVLEMATTKPPWSQYEGVAAMFKIGNSKELPVIPEHLSDDGKDFVRLCLQRNPHHRPTAAQLLDHPFVKYAAPVERSILSSEPSDATPGVTNGVKTLGICQSRITSVDSDSRLAVHSSRVSKAILHASEINIPRNISCPVSPIGSPLLHSRSPQHPSGRMSPSPISSPRTTSGSSTPLTGCGGAIPYNHLKQAIYLQEGFGSMPKSLNNSPYSSGLSFHDSNPDIFRGLQPGAPIFSEMIPENDILGKQVGVGRVAYGELYDGQQVLADRVSRQLLRDHVKTNPSLDLSPSPTLSGRMNGI | 899 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
1 | 2023667 | 2031569 | + | Tan0003972.1 | Tan01g0227 | 737651 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Tan01g0227 | 899 | PANTHER | MAP KINASE KINASE KINASE SSK2-RELATED-RELATED | 53 | 669 | IPR050538 | - | |
Tan01g0227 | 899 | MobiDBLite | consensus disorder prediction | 313 | 340 | - | - | |
Tan01g0227 | 899 | MobiDBLite | consensus disorder prediction | 103 | 122 | - | - | |
Tan01g0227 | 899 | FunFam | Mitogen-activated protein kinase kinase kinase | 408 | 691 | - | - | |
Tan01g0227 | 899 | ProSiteProfiles | Protein kinase domain profile. | 410 | 666 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Tan01g0227 | 899 | MobiDBLite | consensus disorder prediction | 313 | 358 | - | - | |
Tan01g0227 | 899 | MobiDBLite | consensus disorder prediction | 880 | 899 | - | - | |
Tan01g0227 | 899 | MobiDBLite | consensus disorder prediction | 56 | 83 | - | - | |
Tan01g0227 | 899 | MobiDBLite | consensus disorder prediction | 381 | 403 | - | - | |
Tan01g0227 | 899 | MobiDBLite | consensus disorder prediction | 745 | 778 | - | - | |
Tan01g0227 | 899 | SUPERFAMILY | Protein kinase-like (PK-like) | 408 | 749 | IPR011009 | - | |
Tan01g0227 | 899 | Gene3D | Transferase(Phosphotransferase) domain 1 | 408 | 686 | - | - | |
Tan01g0227 | 899 | MobiDBLite | consensus disorder prediction | 741 | 778 | - | - | |
Tan01g0227 | 899 | Pfam | Protein kinase domain | 411 | 666 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Tan01g0227 | 899 | CDD | STKc_MEKK1_plant | 409 | 666 | - | - | |
Tan01g0227 | 899 | ProSitePatterns | Protein kinases ATP-binding region signature. | 416 | 439 | IPR017441 | GO:0005524(InterPro) | |
Tan01g0227 | 899 | MobiDBLite | consensus disorder prediction | 882 | 899 | - | - | |
Tan01g0227 | 899 | MobiDBLite | consensus disorder prediction | 1 | 226 | - | - | |
Tan01g0227 | 899 | MobiDBLite | consensus disorder prediction | 381 | 412 | - | - | |
Tan01g0227 | 899 | MobiDBLite | consensus disorder prediction | 9 | 54 | - | - | |
Tan01g0227 | 899 | SMART | serkin_6 | 410 | 666 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Tan01g0227 | 899 | MobiDBLite | consensus disorder prediction | 165 | 205 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Tan01g0227 | Tan-Chr1:2023667 | Tan03g1303 | Tan-Chr3:69495962 | 2.00E-118 | dispersed | |
Tan11g0630 | Tan-Chr11:5534404 | Tan01g0227 | Tan-Chr1:2023667 | 6.40E-19 | dispersed | |
Tan02g1901 | Tan-Chr2:87278349 | Tan01g0227 | Tan-Chr1:2023667 | 1.10E-92 | transposed | |
Tan06g0792 | Tan-Chr6:6417617 | Tan01g0227 | Tan-Chr1:2023667 | 1.20E-39 | transposed | |
Tan06g2550 | Tan-Chr6:78174735 | Tan01g0227 | Tan-Chr1:2023667 | 2.20E-74 | transposed | |
Tan08g0555 | Tan-Chr8:5391703 | Tan01g0227 | Tan-Chr1:2023667 | 2.60E-73 | transposed | |
Tan11g1341 | Tan-Chr11:11645114 | Tan01g0227 | Tan-Chr1:2023667 | 1.50E-66 | transposed | |
Tan01g0227 | Tan-Chr1:2023667 | Tan07g0368 | Tan-Chr7:7326783 | 0.00E+00 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
66980 | PF00069 | Pkinase | 5.40E-71 | CL0016 | Tan | PK |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Tan01g0227 | K20717 | - | csv:101214961 | 1540.78 |