Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan01g0227 ATGCCTTCATGGTGGGGGAAGCCATCATCCAAAGAAGTAAAGAAGAAAACGAGCAAGGAAAGTTTCATTGACTCATTACACCGTAAGTTTAAGAATTCACCTGAAGGTAAAGTAAACAGCAGATCAGGAAGTTCTCGTAGACGTGGTGGTGACACTATATCTGAGAAGGGGTCTAAATCACCTTTATCAAGATCACCATCACCTTCCAAAGAAGTATCTAGATGTCAAAGTTTTGCTGAAAGATCACGTTCTCACCAACTTCCACTTCCAGATCTGCACCCTGTAGGTGTAGGTCGCACAGACTCTGGGATTAGTGTGACAGCAAAATCAAAATTAGAGAGAAGCTCCAAGACATCTTCATTCCTACCCCTCCCTAGACCTGCATGTATCCGAAGTAGGCCAGATCCTGCAGATTTGGATGGAGATTTGGTCACTGGTTCAGTCTCTGGTGAGTCCTCGAGTGATAGTGATGATCCCAATGATTCACGTCAACGTAGTCCTCAGGCAACTGACTTTGACATTGGGACTAGAACTGTGATAGGTTCTACTGAACCTAGTGCAACTCTCAAGGACCAGTCTTCTACTGTCGTGCAAATAAATTCAAAAGAGGGCAAGAAAGTGGAAAGTCTTTCATTTCCTCATAAGAATCCTTCAATACCTAAACGGAGGCCTTTAAGCAGCAATGTAACAAATCTACAAGTTCCTCGTCATGGGGCTTTCTTTAGCGCTCCAGATAGTTCCATGTCTAGTCCCTCTAGAAGTCCTATGAGGGTATTTAGCACCGAGCAAGTCATGAACACTGCTGTTTGGGCTGGAAAGTCTCACCCAGATGTCATTTTGGGTGGGTCTGGCCACTGCTCCAGTCCTGGTTCTGGTCACAATTCAGGGCACAACTCTATGGGAGGTGATATGGCAGGCCACTTCTTTTGGCAACAAAGTAGGGGTAGCCCTGAATATTCTCCAGTACCTAGTTCTAGAATGACTAGCCCCGGCCCAAGCTCCAGAATTCAAAGTGGTGCTGTTACACCTATTCATCCTAGAGCAGGAGCTCCACCTGCTGAGTCACAAACTTGCTGGCCTGATGAGAAACAAACTCATCGTTTGCCTCTTCCTCCCATAGCAATCTCAATCTCTTCTCCATTCTCTCATTCAAATTCAGCAGTGACATCTCCTTCAGTGCCTAGGAGTCCAGGAAGGACAGAGACTCCAGCAAGCCCAGGTTCACGCTGGAAAAAGGGGAAGCTACTGGGTCAGGGAACATTTGGGCATGTATATGTTGGTTTTAATAGCGAAAGCGGAGAAATGTGTGCAATGAAGGAGGTCACGTTATTTTCTGATGATGCAAAGTCTAAGGAAAGTGCTAAACAATTAATGCAGGAAATTGCTTTACTGAGTCGTTTACGGCATCCCAACATCGTGCAATATTATGGTTCGGAAACAGTGGGCGATAAACTCTATATATATCTGGAATATGTATCTGGTGGTTCCATCTATAAATTACTACAAGAATATGGACAATTTGGGGAATTGGCAATTCGTAGTTATACTCAACAAATACTATCAGGGCTTGCATATTTGCATGCTAAAACTACAGTGCACAGGGATGTTAAAGGAGCAAACATACTTGTTGACCCAAATGGTCGTGTTAAATTGGCAGACTTTGGGATGGCGAAGCATATCACAGGCCAATCATGTCCACTGTCGTTCAAGGGCAGCCCTTACTGGATGGCACCTGAGGTCATAAAGAATTCAAATGGTTGCAACCTTGCCGTTGATATTTGGAGTCTTGGATGCACTGTTCTGGAGATGGCTACTACAAAGCCACCTTGGAGCCAGTATGAAGGGGTTGCTGCGATGTTTAAGATTGGTAATAGCAAAGAACTCCCAGTAATTCCAGAGCACCTCTCAGATGATGGGAAGGATTTTGTGAGACTATGTCTGCAACGAAACCCGCATCATCGACCTACAGCTGCTCAACTTTTGGATCATCCTTTTGTCAAATATGCTGCACCTGTAGAGAGGTCTATTTTGAGCTCTGAACCTTCTGATGCAACTCCTGGGGTTACAAACGGAGTGAAAACTTTGGGTATTTGCCAATCACGGATTACTTCTGTGGACTCAGATAGTAGACTTGCAGTTCATTCTTCAAGAGTCTCAAAAGCTATTCTTCATGCCAGTGAAATCAATATTCCCAGAAACATATCATGTCCTGTTTCACCAATTGGAAGCCCTCTTTTGCACTCACGTTCGCCTCAACATCCCAGTGGAAGAATGTCTCCTTCACCTATATCAAGTCCACGAACCACTTCGGGCTCATCAACACCTTTGACAGGATGTGGTGGCGCAATTCCTTACAACCACCTGAAACAAGCTATATACTTGCAAGAGGGATTTGGAAGCATGCCGAAGTCCTTAAATAATAGTCCATACAGCAGTGGTCTCTCCTTCCACGATTCAAATCCCGATATTTTTCGAGGGTTGCAGCCTGGGGCTCCCATCTTCTCTGAAATGATACCAGAAAATGATATTTTGGGAAAGCAGGTCGGAGTCGGAAGGGTTGCTTATGGTGAATTGTATGATGGACAGCAGGTCTTGGCTGATCGAGTGTCTCGACAGCTCCTGAGGGATCATGTTAAAACAAACCCTTCTCTTGATTTGAGTCCTAGCCCTACATTGTCTGGCCGCATGAATGGTATCTGA 2700 44.81 MPSWWGKPSSKEVKKKTSKESFIDSLHRKFKNSPEGKVNSRSGSSRRRGGDTISEKGSKSPLSRSPSPSKEVSRCQSFAERSRSHQLPLPDLHPVGVGRTDSGISVTAKSKLERSSKTSSFLPLPRPACIRSRPDPADLDGDLVTGSVSGESSSDSDDPNDSRQRSPQATDFDIGTRTVIGSTEPSATLKDQSSTVVQINSKEGKKVESLSFPHKNPSIPKRRPLSSNVTNLQVPRHGAFFSAPDSSMSSPSRSPMRVFSTEQVMNTAVWAGKSHPDVILGGSGHCSSPGSGHNSGHNSMGGDMAGHFFWQQSRGSPEYSPVPSSRMTSPGPSSRIQSGAVTPIHPRAGAPPAESQTCWPDEKQTHRLPLPPIAISISSPFSHSNSAVTSPSVPRSPGRTETPASPGSRWKKGKLLGQGTFGHVYVGFNSESGEMCAMKEVTLFSDDAKSKESAKQLMQEIALLSRLRHPNIVQYYGSETVGDKLYIYLEYVSGGSIYKLLQEYGQFGELAIRSYTQQILSGLAYLHAKTTVHRDVKGANILVDPNGRVKLADFGMAKHITGQSCPLSFKGSPYWMAPEVIKNSNGCNLAVDIWSLGCTVLEMATTKPPWSQYEGVAAMFKIGNSKELPVIPEHLSDDGKDFVRLCLQRNPHHRPTAAQLLDHPFVKYAAPVERSILSSEPSDATPGVTNGVKTLGICQSRITSVDSDSRLAVHSSRVSKAILHASEINIPRNISCPVSPIGSPLLHSRSPQHPSGRMSPSPISSPRTTSGSSTPLTGCGGAIPYNHLKQAIYLQEGFGSMPKSLNNSPYSSGLSFHDSNPDIFRGLQPGAPIFSEMIPENDILGKQVGVGRVAYGELYDGQQVLADRVSRQLLRDHVKTNPSLDLSPSPTLSGRMNGI 899
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 2023667 2031569 + Tan0003972.1 Tan01g0227 737651
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan01g0227 899 PANTHER MAP KINASE KINASE KINASE SSK2-RELATED-RELATED 53 669 IPR050538 -
Tan01g0227 899 MobiDBLite consensus disorder prediction 313 340 - -
Tan01g0227 899 MobiDBLite consensus disorder prediction 103 122 - -
Tan01g0227 899 FunFam Mitogen-activated protein kinase kinase kinase 408 691 - -
Tan01g0227 899 ProSiteProfiles Protein kinase domain profile. 410 666 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Tan01g0227 899 MobiDBLite consensus disorder prediction 313 358 - -
Tan01g0227 899 MobiDBLite consensus disorder prediction 880 899 - -
Tan01g0227 899 MobiDBLite consensus disorder prediction 56 83 - -
Tan01g0227 899 MobiDBLite consensus disorder prediction 381 403 - -
Tan01g0227 899 MobiDBLite consensus disorder prediction 745 778 - -
Tan01g0227 899 SUPERFAMILY Protein kinase-like (PK-like) 408 749 IPR011009 -
Tan01g0227 899 Gene3D Transferase(Phosphotransferase) domain 1 408 686 - -
Tan01g0227 899 MobiDBLite consensus disorder prediction 741 778 - -
Tan01g0227 899 Pfam Protein kinase domain 411 666 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Tan01g0227 899 CDD STKc_MEKK1_plant 409 666 - -
Tan01g0227 899 ProSitePatterns Protein kinases ATP-binding region signature. 416 439 IPR017441 GO:0005524(InterPro)
Tan01g0227 899 MobiDBLite consensus disorder prediction 882 899 - -
Tan01g0227 899 MobiDBLite consensus disorder prediction 1 226 - -
Tan01g0227 899 MobiDBLite consensus disorder prediction 381 412 - -
Tan01g0227 899 MobiDBLite consensus disorder prediction 9 54 - -
Tan01g0227 899 SMART serkin_6 410 666 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Tan01g0227 899 MobiDBLite consensus disorder prediction 165 205 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan01g0227 Tan-Chr1:2023667 Tan03g1303 Tan-Chr3:69495962 2.00E-118 dispersed
Tan11g0630 Tan-Chr11:5534404 Tan01g0227 Tan-Chr1:2023667 6.40E-19 dispersed
Tan02g1901 Tan-Chr2:87278349 Tan01g0227 Tan-Chr1:2023667 1.10E-92 transposed
Tan06g0792 Tan-Chr6:6417617 Tan01g0227 Tan-Chr1:2023667 1.20E-39 transposed
Tan06g2550 Tan-Chr6:78174735 Tan01g0227 Tan-Chr1:2023667 2.20E-74 transposed
Tan08g0555 Tan-Chr8:5391703 Tan01g0227 Tan-Chr1:2023667 2.60E-73 transposed
Tan11g1341 Tan-Chr11:11645114 Tan01g0227 Tan-Chr1:2023667 1.50E-66 transposed
Tan01g0227 Tan-Chr1:2023667 Tan07g0368 Tan-Chr7:7326783 0.00E+00 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
66980 PF00069 Pkinase 5.40E-71 CL0016 Tan PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan01g0227 K20717 - csv:101214961 1540.78