Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan01g0243 ATGAACCCGGCCGCCGTCGAAGCTCCGTTCGCAGTAGTCCTGTTTCTGCTTGCTGCAACGCTGCGGTGGCCGTCGCTCGCTGGAGCGCGGCTTCTGGTGGAGATGACGGTGGTTCGGAACGCCTCTTCCATCGGAGCCTTTTGTTTGGACGGAAGTTTGCCGGCGTATCACCTAGACAGAGGATTCGGCGCCGGAGCGGGAAACTGGCTTCTGCAGTTCGAGGGAGGTGGGTGGTGCAATGATGTAAAGTCTTGTTTGGAAAGAGCAAATACTCGAAGAGGTTCAACGCGTTTGATGACCAAATGGGAAGATTTCAATGGCATTCTTAGCAATAATGCCTCTCTTAATCCAGATTTTTATAACTGGAACCGTGTGAAGCTCAGGTACTGTGACGGAGCCTCATTTGGAGGAGATGCCTTGTTTGACAATGGGACATCACTGCTTTATTTCAAAGGGCAAAAGATATGGGAATCCATCATTCTTGACCTTCTACCAAAAGGTTTGGGGACAGCAAGGAAGGCTTTGCTTTCTGGTTGCTCTGCTGGAGGTCTAGCAACTTTTCTGCACTGTGAAAATTTCACCAACTATTTGCCAAGGAATGCCACTGTCAAATGCTTGAGTGATGCTGGATTTTTTCTTGACTTAAGAGATATTGGTTTAAACCACACCATGAGGAACTTCTATAAGGATCTTGTGGCTCTGCAGGGGATGGAGCCAAATCTGAATGAAAACTGCACAGCCTCCTCTTACTTTCCAGATTTGGTAAATATGGTTTACTTAGCCAAAATCTACACATTCACTTCATTTTACATTACTAAATATGGTTCGAAAATTCTTCTTTTAATTTTCATTATGTGGCAGTGCATATTCCCTCAGTATTCCTTGAAGTACATAACCACTCCATTTTTCATTCTGAATTCAGCATATGATGTTTACCAATTTCATCATGGATTGGTGCCACCTTCTGCTGATTTACATGGACATTGGAATCACTGCAAACTCAATCCAGCTGAATGTAGTGAACTACAGATTGAGGTACTGCAAGGTCTAAGAATGAGTATGCTTTCTGCATTAAGATTATTCTATGAATATTCAAGCAAAGGAGGAATGTTCATAAATTCATGTTTTGCTCATTGCCAAAGTGAGTCACAAGACACATGGTTTGCAGAGGATTCCCCAACAATTGACAACAAGAGTATAGCAGAAGCAGTTGGAGATTGGTATTTTAACAGAAGGAACATAAAGGAGATTGACTGTGCTTATCCATGTGATTCTACTTGCCATAATATTATACCATAA 1299 42.88 MNPAAVEAPFAVVLFLLAATLRWPSLAGARLLVEMTVVRNASSIGAFCLDGSLPAYHLDRGFGAGAGNWLLQFEGGGWCNDVKSCLERANTRRGSTRLMTKWEDFNGILSNNASLNPDFYNWNRVKLRYCDGASFGGDALFDNGTSLLYFKGQKIWESIILDLLPKGLGTARKALLSGCSAGGLATFLHCENFTNYLPRNATVKCLSDAGFFLDLRDIGLNHTMRNFYKDLVALQGMEPNLNENCTASSYFPDLVNMVYLAKIYTFTSFYITKYGSKILLLIFIMWQCIFPQYSLKYITTPFFILNSAYDVYQFHHGLVPPSADLHGHWNHCKLNPAECSELQIEVLQGLRMSMLSALRLFYEYSSKGGMFINSCFAHCQSESQDTWFAEDSPTIDNKSIAEAVGDWYFNRRNIKEIDCAYPCDSTCHNIIP 432
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 2086313 2097418 + Tan0007285.2 Tan01g0243 737667
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan01g0243 432 Pfam Pectinacetylesterase 29 412 IPR004963 GO:0016787(InterPro)
Tan01g0243 432 PANTHER NOTUM-RELATED 22 249 IPR004963 GO:0009505(PANTHER)|GO:0016787(InterPro)|GO:0052793(PANTHER)|GO:0071555(PANTHER)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan01g0243 Tan-Chr1:2086313 Tan01g0245 Tan-Chr1:2086313 6.60E-208 dispersed
Tan01g0242 Tan-Chr1:2086313 Tan01g0243 Tan-Chr1:2086313 7.40E-238 tandem
Tan01g0243 Tan-Chr1:2086313 Tan01g0244 Tan-Chr1:2086313 5.10E-261 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan01g0243 K19882 - csv:101216160 744.962