Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan01g0245 ATGAACCCGGCCGCCGTCGAAGCTCCGTTCGCAGTAGTCCTGTTTCTGCTTGCTGCAACGCTGCGGTGGCCGTCGCTCGCTGGAGCGCGGCTTCTGGTGGAGATGACGGTGGTTCGGAACGCCTCTTCCATCGGAGCCTTTTGTTTGGACGGAAGTTTGCCGGCGTATCACCTAGACAGAGGATTCGGCGCCGGAGCGGGAAACTGGCTTCTGCAGTTCGAGGGAGGTGGGTGGTGCAATGATGTAAAGTCTTGTTTGGAAAGAGCAAATACTCGAAGAGGTTCAACGCGTTTGATGACCAAATGGGAAGATTTCAATGGCATTCTTAGCAATAATGCCTCTCTTAATCCAGATTTTTATAACTGGAACCGTGTGAAGCTCAGGTACTGTGACGGAGCCTCATTTGGAGGAGATGCCTTGTTTGACAATGGGACATCACTGCTTTATTTCAAAGGGCAAAAGATATGGGAATCCATCATTCTTGACCTTCTACCAAAAGGTTTGGGGACAGCAAGGAAGGCTTTGCTTTCTGGTTGCTCTGCTGGAGGTCTAGCAACTTTTCTGCACTGTGAAAATTTCACCAACTATTTGCCAAGGAATGCCACTGTCAAATGCTTGAGTGATGCTGGATTTTTTCTTGACTTAAGAGATATTGGTTTAAACCACACCATGAGGAACTTCTATAAGGATCTTGTGGCTCTGCAGGGGATGGAGCCAAATCTGAATGAAAACTGCACAGCCTCCTCTTACTTTCCAGATTTGGTAAATATGGTTTACTTAGCCAAAATCTACACATTCACTTCATTTTACATTACTAAATATGGTTCGAAAATTCTTCTTTTAATTTTCATTATGTGGCAGTGCATATTCCCTCAGTATTCCTTGAAGTACATAACCACTCCATTTTTCATTCTGAATTCAGCATATGATGTTTACCAATTTCATCATGGATTGGTGCCACCTTCTGCTGATTTACATGGACATTGGAATCACTGCAAACTCAATCCAGCTGAATGTAGTGAACTACAGATTGAGGTACTGCAAGGTACTCTCCACATTCCCCTTCCCTAA 1071 44.82 MNPAAVEAPFAVVLFLLAATLRWPSLAGARLLVEMTVVRNASSIGAFCLDGSLPAYHLDRGFGAGAGNWLLQFEGGGWCNDVKSCLERANTRRGSTRLMTKWEDFNGILSNNASLNPDFYNWNRVKLRYCDGASFGGDALFDNGTSLLYFKGQKIWESIILDLLPKGLGTARKALLSGCSAGGLATFLHCENFTNYLPRNATVKCLSDAGFFLDLRDIGLNHTMRNFYKDLVALQGMEPNLNENCTASSYFPDLVNMVYLAKIYTFTSFYITKYGSKILLLIFIMWQCIFPQYSLKYITTPFFILNSAYDVYQFHHGLVPPSADLHGHWNHCKLNPAECSELQIEVLQGTLHIPLP 356
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 2086313 2097418 + Tan0007285.4 Tan01g0245 737669
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan01g0245 356 PANTHER NOTUM-RELATED 286 349 IPR004963 GO:0009505(PANTHER)|GO:0016787(InterPro)|GO:0052793(PANTHER)|GO:0071555(PANTHER)
Tan01g0245 356 Pfam Pectinacetylesterase 29 349 IPR004963 GO:0016787(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan01g0243 Tan-Chr1:2086313 Tan01g0245 Tan-Chr1:2086313 6.60E-208 dispersed
Tan01g0245 Tan-Chr1:2086313 Tan03g0951 Tan-Chr3:65993579 3.40E-85 dispersed
Tan01g0244 Tan-Chr1:2086313 Tan01g0245 Tan-Chr1:2086313 6.60E-208 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan01g0245 K19882 - csv:101216160 578.556