Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan01g0308 ATGGCGAAAAATGCAACAATCTTGTTTTTAATGATGATGGTTTGTCTGTCGGAAGAAGTTCTTGATAGCAATTTTTACTCAAAAACATGTCCAAATGCAGAGAAAATCATACTCCAAACCGTCTACAATGCTTCCATTCATGACCCCAAAGTCCCTGCTCGTCTTCTCAGGCTCTTCTTCCATGATTGTTTCATAAGGGGATGCGATGCATCGGTGCTGATAGATTCAACACCAGGGAATCAGGCAGAGAAAGATGCACCTCCAAACATCTCGCTAAGGTCGTTCTATGTGATGGACGAGGCCAAAGCCAAGCTTGAAAGTGCTTGCCCACATACTGTTTCTTGTGCTGATATTGTCGCCATTGCTGCTAGAGATGTAGTTACTCTGTCTGGGGGCCCATATTGGAGTGTACTCAAAGGAAGGAAAGATGGGAAGATTTCCAATGCTTCTGAAACAATCAACTTGCCAGCTCCAACTTTCAATGTCTCTCAACTAATCCAGAGCTTTTCAAACAGAGGATTGCAAGTTAAAGACTTGGTTGCTCTATCTGGGGCTCACACTCTTGGATTCTCACACTGTTCTTCCTTTCAATCTAGACTTCGCAACTTCAGCTCAATTCATGACACTGATCCAACTTTGGAATCTGGATTTGCCCAAATTCTTAAAAACAGATGTCCAAAACCAAATTTGGACAAAAATGCTGGACAGTTCTTGGACCCAACTTCCTCAACTTTTGACAATGTGTATTACAAGAGACTGTTGGAAGGAAAGGGTGTGTTTGGTTCAGATCAATCTCTGTTTGGTGATTCTAGAACTAAATGGATTGTTGGGTTGTTTGCTAAAGATCAGAACTTGTTCTTTAAGGAGTTTGGAGCTTCAATGGTGAATTTGGGTAATGTTGGGGTTAGTGAAAATGGGAATGTCAGACTCAATTGCAGGGTGGTGAATTGA 951 41.75 MAKNATILFLMMMVCLSEEVLDSNFYSKTCPNAEKIILQTVYNASIHDPKVPARLLRLFFHDCFIRGCDASVLIDSTPGNQAEKDAPPNISLRSFYVMDEAKAKLESACPHTVSCADIVAIAARDVVTLSGGPYWSVLKGRKDGKISNASETINLPAPTFNVSQLIQSFSNRGLQVKDLVALSGAHTLGFSHCSSFQSRLRNFSSIHDTDPTLESGFAQILKNRCPKPNLDKNAGQFLDPTSSTFDNVYYKRLLEGKGVFGSDQSLFGDSRTKWIVGLFAKDQNLFFKEFGASMVNLGNVGVSENGNVRLNCRVVN 316
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 2613111 2614859 + Tan0009330.1 Tan01g0308 737732
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan01g0308 316 PRINTS Plant peroxidase signature 54 74 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Tan01g0308 316 PRINTS Plant peroxidase signature 177 189 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Tan01g0308 316 PRINTS Plant peroxidase signature 131 146 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Tan01g0308 316 PRINTS Plant peroxidase signature 112 122 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Tan01g0308 316 PRINTS Plant peroxidase signature 292 305 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Tan01g0308 316 PRINTS Plant peroxidase signature 93 106 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Tan01g0308 316 PRINTS Plant peroxidase signature 236 251 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Tan01g0308 316 PRINTS Plant peroxidase signature 252 269 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Tan01g0308 316 PRINTS Plant peroxidase signature 30 49 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Tan01g0308 316 Gene3D - 24 316 - -
Tan01g0308 316 PRINTS Haem peroxidase superfamily signature 178 193 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Tan01g0308 316 PRINTS Haem peroxidase superfamily signature 113 130 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Tan01g0308 316 PRINTS Haem peroxidase superfamily signature 131 143 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Tan01g0308 316 PRINTS Haem peroxidase superfamily signature 52 66 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Tan01g0308 316 PRINTS Haem peroxidase superfamily signature 238 253 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Tan01g0308 316 Gene3D Peroxidase, domain 2 156 297 - -
Tan01g0308 316 FunFam Peroxidase 156 297 - -
Tan01g0308 316 ProSitePatterns Peroxidases proximal heme-ligand signature. 178 188 IPR019793 -
Tan01g0308 316 ProSiteProfiles Plant heme peroxidase family profile. 20 316 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Tan01g0308 316 SUPERFAMILY Heme-dependent peroxidases 21 316 IPR010255 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Tan01g0308 316 Pfam Peroxidase 40 282 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Tan01g0308 316 CDD secretory_peroxidase 21 315 IPR033905 GO:0004601(InterPro)|GO:0042744(InterPro)
Tan01g0308 316 FunFam Peroxidase 24 164 - -
Tan01g0308 316 PANTHER PEROXIDASE 25-RELATED 14 312 IPR000823 GO:0004601(InterPro)|GO:0004601(PANTHER)|GO:0006950(PANTHER)|GO:0006979(InterPro)|GO:0009505(PANTHER)|GO:0009506(PANTHER)|GO:0020037(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan01g0308 Tan-Chr1:2613111 Tan03g2114 Tan-Chr3:75970645 2.30E-85 dispersed
Tan01g0308 Tan-Chr1:2613111 Tan02g2827 Tan-Chr2:96566324 1.10E-98 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan01g0308 K00430 - csv:101210306 567.385