Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Tan01g0325 | ATGATTCCGATGACGGAGGCTTACTGTAGAATGCCAAGCGAAGATGATGGAGATTCGCCGGCCAAATGCCGAGAGCGCCGGCGCCGTAGAATAGAGATGAGGCGATTAGCAACAGTACCGTCGGCGAATCCCTCGCCCTCGACCAGTCACCACCGCAAGGAGAGTCAAACTGAGAGTTCCGGTTTTGAGAAGAAGCGTGTTCGGAATACGGAAGGCGACGGTACTCCGGATATTCCATCGCCTTCGTCATCGGGGGAGGACGTGAAGACTCTAGTGGCTTCACCGTTGGTACCTCAGCCGGTGTTCGGGATGATGTCGGTGTCCGGGAGGTCACGTGAGATGGAGGACGCAGTAATGGTGAGCACATGCCTTCTTGGTCCAGAAAATTGCCGGCGGCGACCGGTACATTTCTTCGCCGTCTACGATGGACATGGAGGCCCTCACGTGGCAGCGCTATGTAGGGAGAAGATGCACGTGTTAGTACAGGAGGAATTGGCGCGCGTGGTTGCTACGCGCGTGGAAACTGAGAGTGGCGGCGGAGGAAGCGGTGCGGCGGAGGAGATTAAGGTGGAGGAAGAGGAGACTTGGAGAAGAGTGATGCAGCAGAGCTTTGAGAGAATGGACGAAGTGGCACTCAGTACTTGTGCCTGTGGGAGTGTCGGAGGCCAGTGTGGTTGCCATCCAATGGAGGTGGCTCTCGGCGGCTCCACCGCCGTCGTCGCCGTGCTCACGCCAGATCACATAATCGTAGCCAACTGCGGTGACTCACGCGCCGTCCTCTGCCGAAGAGAAAGGGCGATTCCGCTTTCGAATGATCACAAGCCGGATAGAATTGATGAACTGGCAAGGATTGAAGCAGCTGGAGGACGGGTGATTTTTGTAAATGGAGCTCGGGTTGAAGGCATCCTTGCAATGTCCCGTGCAATAGGCGACAAGTATCTCAAGTCAGTTGTAATATCAGAGCCAGAAATTACTTTCACCAGAAGAGAATCAGATGATGAATGTTTAATACTTGCAAGTGATGGTTTGTGGGATGTTCTTTCGAGTGAGTTGGCTTGTGAGGTAGCTCGTGAATGTCTCCAAGAAGGAACGGCTGCTGCTTCTACTTCTACAATAGACGCTGCTTCTACTTCTACAATAGACCTCAATGCCATGCCTCAGATTGAAGAAGAAGGGGCTGGAACTTTATATGCATCTCGAAGTGCACTTGCTGCAGCACTGCTTACTCGTCTTGCTTTGGGGCGGAAAAGCACGGACAACATCAGTGTCATAGTTATTGATCTAAAGAGGAGCTAA | 1296 | 52.93 | MIPMTEAYCRMPSEDDGDSPAKCRERRRRRIEMRRLATVPSANPSPSTSHHRKESQTESSGFEKKRVRNTEGDGTPDIPSPSSSGEDVKTLVASPLVPQPVFGMMSVSGRSREMEDAVMVSTCLLGPENCRRRPVHFFAVYDGHGGPHVAALCREKMHVLVQEELARVVATRVETESGGGGSGAAEEIKVEEEETWRRVMQQSFERMDEVALSTCACGSVGGQCGCHPMEVALGGSTAVVAVLTPDHIIVANCGDSRAVLCRRERAIPLSNDHKPDRIDELARIEAAGGRVIFVNGARVEGILAMSRAIGDKYLKSVVISEPEITFTRRESDDECLILASDGLWDVLSSELACEVARECLQEGTAAASTSTIDAASTSTIDLNAMPQIEEEGAGTLYASRSALAAALLTRLALGRKSTDNISVIVIDLKRS | 431 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
1 | 2867221 | 2875096 | - | Tan0018373.1 | Tan01g0325 | 737749 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Tan01g0325 | 431 | MobiDBLite | consensus disorder prediction | 11 | 26 | - | - | |
Tan01g0325 | 431 | Pfam | Protein phosphatase 2C | 102 | 375 | IPR001932 | - | |
Tan01g0325 | 431 | MobiDBLite | consensus disorder prediction | 51 | 72 | - | - | |
Tan01g0325 | 431 | FunFam | Protein phosphatase 2C 50 | 122 | 431 | - | - | |
Tan01g0325 | 431 | Gene3D | - | 96 | 431 | IPR036457 | - | |
Tan01g0325 | 431 | SUPERFAMILY | PP2C-like | 95 | 429 | IPR036457 | - | |
Tan01g0325 | 431 | CDD | PP2Cc | 101 | 428 | IPR001932 | - | |
Tan01g0325 | 431 | ProSiteProfiles | PPM-type phosphatase domain profile. | 101 | 428 | IPR001932 | - | |
Tan01g0325 | 431 | SMART | PP2C_4 | 91 | 426 | IPR001932 | - | |
Tan01g0325 | 431 | PANTHER | PROTEIN PHOSPHATASE | 58 | 427 | IPR015655 | GO:0004722(PANTHER)|GO:0004722(InterPro)|GO:0005634(PANTHER)|GO:0006470(InterPro)|GO:0035970(PANTHER) | |
Tan01g0325 | 431 | ProSitePatterns | PPM-type phosphatase domain signature. | 137 | 145 | IPR000222 | GO:0043169(InterPro) | |
Tan01g0325 | 431 | MobiDBLite | consensus disorder prediction | 1 | 88 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Tan01g0325 | Tan-Chr1:2867221 | Tan01g2399 | Tan-Chr1:29510854 | 2.50E-74 | dispersed | |
Tan09g1243 | Tan-Chr9:64759072 | Tan01g0325 | Tan-Chr1:2867221 | 2.40E-10 | dispersed | |
Tan01g0325 | Tan-Chr1:2867221 | Tan01g0326 | Tan-Chr1:2867221 | 3.80E-171 | tandem |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Tan01g0325 | K14497 | - | csv:101206634 | 655.21 |