Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan01g0326 ATGATTCCGATGACGGAGGCTTACTGTAGAATGCCAAGCGAAGATGATGGAGATTCGCCGGCCAAATGCCGAGAGCGCCGGCGCCGTAGAATAGAGATGAGGCGATTAGCAACAGTACCGTCGGCGAATCCCTCGCCCTCGACCAGTCACCACCGCAAGGAGAGTCAAACTGAGAGTTCCGGTTTTGAGAAGAAGCGTGTTCGGAATACGGAAGGCGACGGTACTCCGGATATTCCATCGCCTTCGTCATCGGGGGAGGACGTGAAGACTCTAGTGGCTTCACCGTTGGTACCTCAGCCGGTGTTCGGGATGATGTCGGTGTCCGGGAGGTCACGTGAGATGGAGGACGCAGTAATGGTGAGCACATGCCTTCTTGGTCCAGAAAATTGCCGGCGGCGACCGGTACATTTCTTCGCCGTCTACGATGGACATGGAGGCCCTCACGTGGCAGCGCTATGTAGGGAGAAGATGCACGTGTTAGTACAGGAGGAATTGGCGCGCGTGGTTGCTACGCGCGTGGAAACTGAGAGTGGCGGCGGAGGAAGCGGTGCGGCGGAGGAGATTAAGGTGGAGGAAGAGGAGACTTGGAGAAGAGTGATGCAGCAGAGCTTTGAGAGAATGGACGAAGTGGCACTCAGTACTTGTGCCTGTGGGAGTGTCGGAGGCCAGTGTGGTTGCCATCCAATGGAGGTGGCTCTCGGCGGCTCCACCGCCGTCGTCGCCGTGCTCACGCCAGATCACATAATCGTAGCCAACTGCGGTGACTCACGCGCCGTCCTCTGCCGAAGAGAAAGGGCGATTCCGCTTTCGAATGATCACAAGCCGGATAGAATTGATGAACTGGCAAGGATTGAAGCAGCTGGAGGACGGGTGATTTTTGTAAATGGAGCTCGGGTTGAAGGCATCCTTGCAATGTCCCGTGCAATAGGTGAGCATAGACAGATAATGTGTCTGGAGAGTCTTCAGTTGGCATATTGA 978 55.83 MIPMTEAYCRMPSEDDGDSPAKCRERRRRRIEMRRLATVPSANPSPSTSHHRKESQTESSGFEKKRVRNTEGDGTPDIPSPSSSGEDVKTLVASPLVPQPVFGMMSVSGRSREMEDAVMVSTCLLGPENCRRRPVHFFAVYDGHGGPHVAALCREKMHVLVQEELARVVATRVETESGGGGSGAAEEIKVEEEETWRRVMQQSFERMDEVALSTCACGSVGGQCGCHPMEVALGGSTAVVAVLTPDHIIVANCGDSRAVLCRRERAIPLSNDHKPDRIDELARIEAAGGRVIFVNGARVEGILAMSRAIGEHRQIMCLESLQLAY 325
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 2867221 2875096 - Tan0018373.2 Tan01g0326 737750
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan01g0326 325 MobiDBLite consensus disorder prediction 11 26 - -
Tan01g0326 325 MobiDBLite consensus disorder prediction 51 72 - -
Tan01g0326 325 ProSiteProfiles PPM-type phosphatase domain profile. 101 325 IPR001932 -
Tan01g0326 325 Gene3D - 96 317 IPR036457 -
Tan01g0326 325 SUPERFAMILY PP2C-like 95 315 IPR036457 -
Tan01g0326 325 Pfam Protein phosphatase 2C 102 313 IPR001932 -
Tan01g0326 325 PANTHER PROTEIN PHOSPHATASE 56 312 IPR015655 GO:0004722(PANTHER)|GO:0004722(InterPro)|GO:0005634(PANTHER)|GO:0006470(InterPro)|GO:0035970(PANTHER)
Tan01g0326 325 CDD PP2Cc 101 310 IPR001932 -
Tan01g0326 325 SMART PP2C_4 91 325 IPR001932 -
Tan01g0326 325 ProSitePatterns PPM-type phosphatase domain signature. 137 145 IPR000222 GO:0043169(InterPro)
Tan01g0326 325 MobiDBLite consensus disorder prediction 1 88 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan01g0326 Tan-Chr1:2867221 Tan01g2399 Tan-Chr1:29510854 1.80E-48 dispersed
Tan01g0325 Tan-Chr1:2867221 Tan01g0326 Tan-Chr1:2867221 3.80E-171 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan01g0326 K14497 - csv:101206634 493.041