Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan01g0328 ATGGCTGAAGCTCCTCTGAAATGGCTCTGTTTGCTTCTGTTTTTCCACTCTTTGCTTCTTTCAAACGCTCAGTTTTTCAAAACTTATGTCGTTCAAATGGACAGGTCTGCAATGCCGGACTCCTTTTCCCATCATTTTCAGTGGTACTCCACTGTGCTAAGCAGTGTGATGGTTAACCCTGAGACTGAAGGTAATGGGGGAGGTGAAGACAGGATCATTTACAGTTACCAGAATGTTTTCCATGGAGTTGCAGCTCGACTGAGTGAAGAAGAGGCTGAGAGGCTCGAGGAACAAGATGGGGTGTTGGCTATTTTTCCGGAGACGAAGTATGAGCTTCATACAACGAGAAGCCCCAGATTTCTTGGGCTTGAACCGGCTGACAGCAACAGCGCCTGGTCTCAGCAAATTGCCGACCATGATGTCATCGTTGGAGTTTTGGACACTGGGATTTGGCCGGAGAGTGAGAGCTTCAACGACGCCGGAATGTCGCCGGTGCCGCCGCATTGGAAAGGGGAATGCGAGACAGGGCGAGGCTTCACGAAGCAGAATTGTAATAGAAAGATCGTCGGTGCCAGAATGTTCTACCATGGGTATGAAGCTGCAACTGGGAAATTTAACGAAAAGTTGGAGTACAAATCGCCGAGGGATCAAGATGGGCATGGGACTCACACGGCGGCCACCGTCGCCGGCTCTCCGGTGGCCGGCGCAAGCCTATTGGGATATGCTTATGGAACGGCCAGAGGAATGGCGCCCGGTGCTAGAATTGCGGCCTACAAAGTCTGTTGGGTTGGTGGCTGCTTTAGCTCCGACATTTTGTCGGCTGTGGACAGAGCCGTGGCCGACGGCGTAAATGTTCTGTCCATCTCTCTGGGAGGTGGGGTCTCTTCTTACTATCGCGATAGCCTCTCAGTTGCAGCATTTGGGGCCATGGAGATGGGCGTGTTTGTGTCCTGCTCGGCCGGAAATGGAGGGCCCGACCCTGTCAGTCTCACAAACGTATCGCCATGGATAACCACCGTCGGCGCCAGTACAATGGACAGAGATTTCCCGGCCATTGTCAAGCTCGGCGATGGCAGAACAGTCACCGGCGTTTCACTTTACAGAGGAAGAATCACAATTCCAGAAAACAAACAATTCCCAGTTGTGTACATGGGGAGTAATTCGAGTAACCCTGATCCGAGCTCGCTCTGTTTAGAAGGGACTTTAGATCCCCATTTCGTGGCCGGGAAAATTGTGATATGCGATCGCGGAATTAGCCCTCGGGTTCAGAAGGGTGTGGTGGTGAAAAATGCAGGTGGGATTGGGATGATTCTGTCGAACACGGCGGCGAATGGGGAAGAACTTGTTGCCGATTGCCATTTGGTGCCGGCCGTCGCCATCGGAGAGAAAGAAGGCAAAGCAATTAAGCAATACGCATTAACGAATCGAAAAGCGACGGCGACTCTAGGGTTTTTAGGTACAAGATTGGGGGTAAAACCCTCGCCGGTGGTGGCGGCGTTTTCGTCCAGAGGACCAAATTTCCTCACTCTGGAGATTCTCAAGCCCGATCTGGTGGCTCCCGGCGTCAACATCCTCGCTGCTTGGACCGGAAAAACAGGGCCGTCGAGCTTGACGACGGATACAAGAAGGGTCAAATTCAACATTCTTTCAGGAACTTCAATGTCTTGCCCTCACGTCAGTGGCGTAGCGGCTCTGATCAAATCGAAGCATCCCGATTGGGGCCCATCGGCGATCAAATCGGCGCTGATGACCACCGCTTATGTCCACGACAACACCTATAAGCCACTCAAAGACGCCTCCGCCGCATCGCCGTCGAGTCCGTACGACCATGGCGCCGGCCACATAAACCCCAGAAAAGCCCTAGATCCTGGTTTGGTTTACGAAATTCAACCGCAAGATTACTTCGAATTCCTCTGTACGCAGGATTTAACACCTACACAGCTCAAAGTCTTCTCCAAATACTCGAACCGATCGTGCCATCGCCTTCTTCCCAACCCTGGAGATTTGAATTATCCGGCCATCTCCGCTGTCTTCCCTGAGAAAACCTCCGTCACTTCCCTGACCCTTCACAGAACCGTCACCAACGTCGGCGCTGCAGCCTCCAGTTACCATGCGGTGGTGACTCCGTTTAACGGCGCCACCGTGAAAGTCGAGCCGGAGAACCTGAACTTCACAAGGAGTTATCAGAAGCTTTCTTACAGAATCACTTTTCTGTCGAAGAAGAGACAGAGTATGCCGGAATTTGGAGGGCTGATTTGGAAGGATGGAACTCACAGAGTGAGAAGCCCCATTGTCATCACTTGGTTGTCGTTTGTTTGA 2319 52.09 MAEAPLKWLCLLLFFHSLLLSNAQFFKTYVVQMDRSAMPDSFSHHFQWYSTVLSSVMVNPETEGNGGGEDRIIYSYQNVFHGVAARLSEEEAERLEEQDGVLAIFPETKYELHTTRSPRFLGLEPADSNSAWSQQIADHDVIVGVLDTGIWPESESFNDAGMSPVPPHWKGECETGRGFTKQNCNRKIVGARMFYHGYEAATGKFNEKLEYKSPRDQDGHGTHTAATVAGSPVAGASLLGYAYGTARGMAPGARIAAYKVCWVGGCFSSDILSAVDRAVADGVNVLSISLGGGVSSYYRDSLSVAAFGAMEMGVFVSCSAGNGGPDPVSLTNVSPWITTVGASTMDRDFPAIVKLGDGRTVTGVSLYRGRITIPENKQFPVVYMGSNSSNPDPSSLCLEGTLDPHFVAGKIVICDRGISPRVQKGVVVKNAGGIGMILSNTAANGEELVADCHLVPAVAIGEKEGKAIKQYALTNRKATATLGFLGTRLGVKPSPVVAAFSSRGPNFLTLEILKPDLVAPGVNILAAWTGKTGPSSLTTDTRRVKFNILSGTSMSCPHVSGVAALIKSKHPDWGPSAIKSALMTTAYVHDNTYKPLKDASAASPSSPYDHGAGHINPRKALDPGLVYEIQPQDYFEFLCTQDLTPTQLKVFSKYSNRSCHRLLPNPGDLNYPAISAVFPEKTSVTSLTLHRTVTNVGAAASSYHAVVTPFNGATVKVEPENLNFTRSYQKLSYRITFLSKKRQSMPEFGGLIWKDGTHRVRSPIVITWLSFV 772
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 2890649 2893337 - Tan0016264.1 Tan01g0328 737752
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan01g0328 772 FunFam Subtilisin-like protease SBT1.9 18 113 - -
Tan01g0328 772 FunFam Subtilisin-like protease SBT1.5 140 360 - -
Tan01g0328 772 ProSitePatterns Serine proteases, subtilase family, serine active site. 551 561 IPR023828 -
Tan01g0328 772 CDD Peptidases_S8_3 110 587 IPR034197 -
Tan01g0328 772 Gene3D Peptidase S8/S53 domain 140 634 IPR036852 GO:0004252(InterPro)|GO:0006508(InterPro)
Tan01g0328 772 PRINTS Subtilisin serine protease family (S8) signature 216 229 IPR015500 -
Tan01g0328 772 PRINTS Subtilisin serine protease family (S8) signature 550 566 IPR015500 -
Tan01g0328 772 PRINTS Subtilisin serine protease family (S8) signature 138 157 IPR015500 -
Tan01g0328 772 Gene3D - 638 769 - -
Tan01g0328 772 FunFam subtilisin-like protease SBT1.5 346 489 - -
Tan01g0328 772 Pfam Peptidase inhibitor I9 28 113 IPR010259 -
Tan01g0328 772 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 20 113 IPR037045 -
Tan01g0328 772 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 28 765 IPR045051 -
Tan01g0328 772 Pfam PA domain 380 468 IPR003137 -
Tan01g0328 772 Gene3D - 346 490 - -
Tan01g0328 772 CDD PA_subtilisin_like 353 482 - -
Tan01g0328 772 ProSiteProfiles Serine proteases, subtilase domain profile. 109 621 - -
Tan01g0328 772 Pfam Subtilase family 139 594 IPR000209 GO:0006508(InterPro)|GO:0008236(InterPro)
Tan01g0328 772 Pfam Fibronectin type-III domain 668 766 IPR041469 -
Tan01g0328 772 SUPERFAMILY Subtilisin-like 112 625 IPR036852 GO:0004252(InterPro)|GO:0006508(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan01g0328 Tan-Chr1:2890649 Tan03g1629 Tan-Chr3:72452472 7.60E-239 dispersed
Tan08g0880 Tan-Chr8:11423862 Tan01g0328 Tan-Chr1:2890649 1.20E-98 dispersed
Tan02g2319 Tan-Chr2:91943936 Tan01g0328 Tan-Chr1:2890649 1.40E-142 transposed
Tan05g2860 Tan-Chr5:80934143 Tan01g0328 Tan-Chr1:2890649 3.30E-80 transposed
Tan06g0072 Tan-Chr6:816828 Tan01g0328 Tan-Chr1:2890649 5.60E-213 transposed
Tan01g0328 Tan-Chr1:2890649 Tan07g1735 Tan-Chr7:68834370 8.60E-150 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan01g0328 - - - 0.0