Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan01g0337 ATGGTTTATCGATTTCTTATGGCGAGAAGAGGAGGAGCAATTGGATCATGGCTTTGCATTGTTCTGGTTTTAATTTCTGCGCGAATTCATGTCTCAGCCAGATCGGATAAGGAAATTAGGGAAAGATTTTATGGAAACTTGATCAACTCAACGGCACCGACTGCCGGTGACGGTAGCATTGCCCAAATGTTCGATAAGGTGCTCGAGAAGGAGTTCTCTGACAATGATCTACCTGAAGGTTCTGGCGGAAGTAGCTTTAATAGCAGTGTCGCTGATCAGGAGGCAGAACTGGAGACAGTAGCTAAAATCACTCACGAGAAGGGCAAGAAAAATGATAGTCAAAAGGCGAATGGGACAAGGGCATTCCAATTTCAGGATGTTTTCTCGCTGGAAAATGAAGAATCTGATGATGTTACAACGTTGATTGATAAAAAAGACAATGTGTTTGTGATGTCAAACAAGAAATCAAAGTATCCAGTACTTCAAGTAGATTTGAGATTGATTTCAGACTTGGTGGTGGTTATCGTTTCTGCGGCAATTGGAGGAATTATCTTTTCTTGTTTGGGACAACCGGTTATTGTGGGCTATCTTCTTGCGGGGTCAATCATTGGACCAGGAGGTCTAAAATTCATCAGTGAAATGGTGCAGGTTGAGACAGTGGCACAATTTGGTGTTGTATTTCTTCTTTTTGCTTTAGGACTGGAGTTTTCTTTGACAAAGTTAAAAGTTGTTGGAGCTGTTGCTGTTTTTGGAGGTTTCCTACAGATCATCATATTTATGTTCTCGTGTGGCATAATTGCCATGTTAAGTGGAGCTAAATTGTCCGAGGGTGTATTTGTTGGTTCATTTCTATCAATGTCATCGACAGCAGTGGTGGTGAAGTTCTTGGTAGAACGAAATAGTAGTAATACTCTTCATGGTCAAGTTACCATTGGAACGCTTATCTTACAGGATTGTGCGGTTGGTTTGTTATTTGCCTTGCTCCCTGTTTTGGGTGGTCACAATGGTCTTATTTTAGGAATGATATCTATGGGAAAGTTGCTACTGGTGCTATCAGTATATCTCACAGCCGCATCAATTTTGTCATGGTCATTTGTTCCCCGCTTTCTTAAGTTGATGATGCAGCTATCGTCTCAAACAAATGAGTTGTATCAGCTTGCTGCTGTGGCATTTTGCTTGTTGTCTGCCTGGTGCAGTGATAAGTTGGGCCTCAGTCTTGAGTTGGGTTCCTTTGTAGCTGGAGTTATGATATCTACCACCGACTTCGGTCAACATACTTTAGATCAGGTGGAACCAATCCGCAATTTTTTTGCAGCTTTGTTTCTTTCGAGTATTGGAATGCTCATTCATGTACATTTTCTGTGGAGCCATTTGGATATTTTGCTAGCATCTGTAATGCTGGTCGTGTTTGTCAAGACAGCAGTGGCTACCGTTGTTGCTAAGGCATTTGGATACAGTATTAGGACTTCTTTTCAGGTTGGTGTCATGCTTGCTCAAATTGGAGAATTTGCTTTTGTTCTCCTAAGCCGTGCTTCAAATCTTCATCTCATTGGGGGGAAAGTTTATCTGCTGCTTCTTGGAACAACAGCTCTTAGTCTGGTTACCACCCCTCTTCTGTTCAAATTAATACCTGCTGTCTTGAATTTAGGGGTTCTCATGCATTGGTTCCCCTCTGAAAACAACATTCAAAATGAGGAGAAAGCATCAATGATTGAAGCACATAACAGAATGTTGTGA 1737 41.51 MVYRFLMARRGGAIGSWLCIVLVLISARIHVSARSDKEIRERFYGNLINSTAPTAGDGSIAQMFDKVLEKEFSDNDLPEGSGGSSFNSSVADQEAELETVAKITHEKGKKNDSQKANGTRAFQFQDVFSLENEESDDVTTLIDKKDNVFVMSNKKSKYPVLQVDLRLISDLVVVIVSAAIGGIIFSCLGQPVIVGYLLAGSIIGPGGLKFISEMVQVETVAQFGVVFLLFALGLEFSLTKLKVVGAVAVFGGFLQIIIFMFSCGIIAMLSGAKLSEGVFVGSFLSMSSTAVVVKFLVERNSSNTLHGQVTIGTLILQDCAVGLLFALLPVLGGHNGLILGMISMGKLLLVLSVYLTAASILSWSFVPRFLKLMMQLSSQTNELYQLAAVAFCLLSAWCSDKLGLSLELGSFVAGVMISTTDFGQHTLDQVEPIRNFFAALFLSSIGMLIHVHFLWSHLDILLASVMLVVFVKTAVATVVAKAFGYSIRTSFQVGVMLAQIGEFAFVLLSRASNLHLIGGKVYLLLLGTTALSLVTTPLLFKLIPAVLNLGVLMHWFPSENNIQNEEKASMIEAHNRML 578
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 2964714 2973740 + Tan0014323.1 Tan01g0337 737761
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan01g0337 578 PANTHER POTASSIUM/PROTON ANTIPORTER-RELATED 18 573 IPR045158 GO:0015386(InterPro)|GO:0071805(InterPro)|GO:1902600(InterPro)
Tan01g0337 578 Gene3D - 165 548 IPR038770 -
Tan01g0337 578 Pfam Sodium/hydrogen exchanger family 175 541 IPR006153 GO:0006812(InterPro)|GO:0015297(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro)|GO:1902600(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan01g0337 Tan-Chr1:2964714 Tan01g0339 Tan-Chr1:2964714 1.40E-277 dispersed
Tan01g0337 Tan-Chr1:2964714 Tan01g0338 Tan-Chr1:2964714 1.10E-274 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan01g0337 K26735 - csv:101207607 1026.93