Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan01g0338 ATGTTCGATAAGGTGCTCGAGAAGGAGTTCTCTGACAATGATCTACCTGAAGGTTCTGGCGGAAGTAGCTTTAATAGCAGTGTCGCTGATCAGGAGGCAGAACTGGAGACAGTAGCTAAAATCACTCACGAGAAGGGCAAGAAAAATGATAGTCAAAAGGCGAATGGGACAAGGGCATTCCAATTTCAGGATGTTTTCTCGCTGGAAAATGAAGAATCTGATGATGTTACAACGTTGATTGATAAAAAAGACAATGTGTTTGTGATGTCAAACAAGAAATCAAAGTATCCAGTACTTCAAGTAGATTTGAGATTGATTTCAGACTTGGTGGTGGTTATCGTTTCTGCGGCAATTGGAGGAATTATCTTTTCTTGTTTGGGACAACCGGTTATTGTGGGCTATCTTCTTGCGGGGTCAATCATTGGACCAGGAGGTCTAAAATTCATCAGTGAAATGGTGCAGGTTGAGACAGTGGCACAATTTGGTGTTGTATTTCTTCTTTTTGCTTTAGGACTGGAGTTTTCTTTGACAAAGTTAAAAGTTGTTGGAGCTGTTGCTGTTTTTGGAGGTTTCCTACAGATCATCATATTTATGTTCTCGTGTGGCATAATTGCCATGTTAAGTGGAGCTAAATTGTCCGAGGGTGTATTTGTTGGTTCATTTCTATCAATGTCATCGACAGCAGTGGTGGTGAAGTTCTTGGTAGAACGAAATAGTAGTAATACTCTTCATGGTCAAGTTACCATTGGAACGCTTATCTTACAGGATTGTGCGGTTGGTTTGTTATTTGCCTTGCTCCCTGTTTTGGGTGGTCACAATGGTCTTATTTTAGGAATGATATCTATGGGAAAGTTGCTACTGGTGCTATCAGTATATCTCACAGCCGCATCAATTTTGTCATGGTCATTTGTTCCCCGCTTTCTTAAGTTGATGATGCAGCTATCGTCTCAAACAAATGAGTTGTATCAGCTTGCTGCTGTGGCATTTTGCTTGTTGTCTGCCTGGTGCAGTGATAAGTTGGGCCTCAGTCTTGAGTTGGGTTCCTTTGTAGCTGGAGTTATGATATCTACCACCGACTTCGGTCAACATACTTTAGATCAGGTGGAACCAATCCGCAATTTTTTTGCAGCTTTGTTTCTTTCGAGTATTGGAATGCTCATTCATGTACATTTTCTGTGGAGCCATTTGGATATTTTGCTAGCATCTGTAATGCTGGTCGTGTTTGTCAAGACAGCAGTGGCTACCGTTGTTGCTAAGGCATTTGGATACAGTATTAGGACTTCTTTTCAGGTTGGTGTCATGCTTGCTCAAATTGGAGAATTTGCTTTTGTTCTCCTAAGCCGTGCTTCAAATCTTCATCTCATTGGGGGGAAAGTTTATCTGCTGCTTCTTGGAACAACAGCTCTTAGTCTGGTTACCACCCCTCTTCTGTTCAAATTAATACCTGCTGTCTTGAATTTAGGGGTTCTCATGCATTGGTTCCCCTCTGAAAACAACATTCAAAATGAGGAGAAAGCATCAATGATTGAAGCACATAACAGAATGTTGTGA 1551 41.2 MFDKVLEKEFSDNDLPEGSGGSSFNSSVADQEAELETVAKITHEKGKKNDSQKANGTRAFQFQDVFSLENEESDDVTTLIDKKDNVFVMSNKKSKYPVLQVDLRLISDLVVVIVSAAIGGIIFSCLGQPVIVGYLLAGSIIGPGGLKFISEMVQVETVAQFGVVFLLFALGLEFSLTKLKVVGAVAVFGGFLQIIIFMFSCGIIAMLSGAKLSEGVFVGSFLSMSSTAVVVKFLVERNSSNTLHGQVTIGTLILQDCAVGLLFALLPVLGGHNGLILGMISMGKLLLVLSVYLTAASILSWSFVPRFLKLMMQLSSQTNELYQLAAVAFCLLSAWCSDKLGLSLELGSFVAGVMISTTDFGQHTLDQVEPIRNFFAALFLSSIGMLIHVHFLWSHLDILLASVMLVVFVKTAVATVVAKAFGYSIRTSFQVGVMLAQIGEFAFVLLSRASNLHLIGGKVYLLLLGTTALSLVTTPLLFKLIPAVLNLGVLMHWFPSENNIQNEEKASMIEAHNRML 516
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 2964714 2973740 + Tan0014323.2 Tan01g0338 737762
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan01g0338 516 MobiDBLite consensus disorder prediction 16 31 - -
Tan01g0338 516 MobiDBLite consensus disorder prediction 1 31 - -
Tan01g0338 516 Gene3D - 103 486 IPR038770 -
Tan01g0338 516 PANTHER POTASSIUM/PROTON ANTIPORTER-RELATED 1 511 IPR045158 GO:0015386(InterPro)|GO:0071805(InterPro)|GO:1902600(InterPro)
Tan01g0338 516 Pfam Sodium/hydrogen exchanger family 113 479 IPR006153 GO:0006812(InterPro)|GO:0015297(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro)|GO:1902600(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan01g0338 Tan-Chr1:2964714 Tan09g1155 Tan-Chr9:63907897 6.10E-184 dispersed
Tan01g0337 Tan-Chr1:2964714 Tan01g0338 Tan-Chr1:2964714 1.10E-274 tandem
Tan01g0338 Tan-Chr1:2964714 Tan01g0339 Tan-Chr1:2964714 1.10E-241 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan01g0338 K26735 - csv:101207607 926.776