Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan01g0339 ATGGTTTATCGATTTCTTATGGCGAGAAGAGGAGGAGCAATTGGATCATGGCTTTGCATTGTTCTGGTTTTAATTTCTGCGCGAATTCATGTCTCAGCCAGATCGGATAAGGAAATTAGGGAAAGATTTTATGGAAACTTGATCAACTCAACGGCACCGACTGCCGGTGACGGTAGCATTGCCCAAATGTTCGATAAGGTGCTCGAGAAGGAGTTCTCTGACAATGATCTACCTGAAGGTTCTGGCGGAAGTAGCTTTAATAGCAGTGTCGCTGATCAGGAGGCAGAACTGGAGACAGTAGCTAAAATCACTCACGAGAAGGGCAAGAAAAATGATAGTCAAAAGGCGAATGGGACAAGGGCATTCCAATTTCAGGATGTTTTCTCGCTGGAAAATGAAGAATCTGATGATGTTACAACGTTGATTGATAAAAAAGACAATGTGTTTGTGATGTCAAACAAGAAATCAAAGTATCCAGTACTTCAAGTAGATTTGAGATTGATTTCAGACTTGGTGGTGGTTATCGTTTCTGCGGCAATTGGAGGAATTATCTTTTCTTGTTTGGGACAACCGGTTATTGTGGGCTATCTTCTTGCGGGGTCAATCATTGGACCAGGAGGTCTAAAATTCATCAGTGAAATGGTGCAGGTTGAGACAGTGGCACAATTTGGTGTTGTATTTCTTCTTTTTGCTTTAGGACTGGAGTTTTCTTTGACAAAGTTAAAAGTTGTTGGAGCTGTTGCTGTTTTTGGAGGTTTCCTACAGATCATCATATTTATGTTCTCGTGTGGCATAATTGCCATGTTAAGTGGAGCTAAATTGTCCGAGGGTGTATTTGTTGGTTCATTTCTATCAATGTCATCGACAGCAGTGGTGGTGAAGTTCTTGGTAGAACGAAATAGTAGTAATACTCTTCATGGTCAAGTTACCATTGGAACGCTTATCTTACAGGATTGTGCGGTTGGTTTGTTATTTGCCTTGCTCCCTGTTTTGGGTGGTCACAATGGTCTTATTTTAGGAATGATATCTATGGGAAAGTTGCTACTGGTGCTATCAGTATATCTCACAGCCGCATCAATTTTGTCATGGTCATTTGTTCCCCGCTTTCTTAAGTTGATGATGCAGCTATCGTCTCAAACAAATGAGTTGTATCAGCTTGCTGCTGTGGCATTTTGCTTGTTGTCTGCCTGGTGCAGTGATAAGTTGGGCCTCAGTCTTGAGTTGGGTTCCTTTGTAGCTGGAGTTATGATATCTACCACCGACTTCGGTCAACATACTTTAGATCAGGTGGAACCAATCCGCAATTTTTTTGCAGCTTTGTTTCTTTCGAGTATTGGAATGCTCATTCATGTACATTTTCTGTGGAGCCATTTGGATATTTTGCTAGCATCTGTAATGCTGGTCGTGTTTGTCAAGACAGCAGTGGCTACCGTTGTTGCTAAGGCATTTGGATACAGTATTAGGACTTCTTTTCAGGTTGGTGTCATGCTTGCTCAAATTGGAGAATTTGCTTTTGTTCTCCTAAGCCGTGCTTCAAATCTTCATCTCATTGGGGTTACTTCTTTCTCTCTCTCTCTCTCTAGCTTCCTCATTTCTTATGTGACACGCAGACAAAATATGATGATAGACCTTCACATAGCATGTTTTTAG 1650 41.39 MVYRFLMARRGGAIGSWLCIVLVLISARIHVSARSDKEIRERFYGNLINSTAPTAGDGSIAQMFDKVLEKEFSDNDLPEGSGGSSFNSSVADQEAELETVAKITHEKGKKNDSQKANGTRAFQFQDVFSLENEESDDVTTLIDKKDNVFVMSNKKSKYPVLQVDLRLISDLVVVIVSAAIGGIIFSCLGQPVIVGYLLAGSIIGPGGLKFISEMVQVETVAQFGVVFLLFALGLEFSLTKLKVVGAVAVFGGFLQIIIFMFSCGIIAMLSGAKLSEGVFVGSFLSMSSTAVVVKFLVERNSSNTLHGQVTIGTLILQDCAVGLLFALLPVLGGHNGLILGMISMGKLLLVLSVYLTAASILSWSFVPRFLKLMMQLSSQTNELYQLAAVAFCLLSAWCSDKLGLSLELGSFVAGVMISTTDFGQHTLDQVEPIRNFFAALFLSSIGMLIHVHFLWSHLDILLASVMLVVFVKTAVATVVAKAFGYSIRTSFQVGVMLAQIGEFAFVLLSRASNLHLIGVTSFSLSLSSFLISYVTRRQNMMIDLHIACF 549
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 2964714 2973740 + Tan0014323.3 Tan01g0339 737763
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan01g0339 549 Gene3D - 165 541 IPR038770 -
Tan01g0339 549 PANTHER POTASSIUM/PROTON ANTIPORTER-RELATED 18 535 IPR045158 GO:0015386(InterPro)|GO:0071805(InterPro)|GO:1902600(InterPro)
Tan01g0339 549 Pfam Sodium/hydrogen exchanger family 175 533 IPR006153 GO:0006812(InterPro)|GO:0015297(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro)|GO:1902600(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan01g0337 Tan-Chr1:2964714 Tan01g0339 Tan-Chr1:2964714 1.40E-277 dispersed
Tan01g0339 Tan-Chr1:2964714 Tan09g1155 Tan-Chr9:63907897 2.20E-168 dispersed
Tan01g0338 Tan-Chr1:2964714 Tan01g0339 Tan-Chr1:2964714 1.10E-241 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan01g0339 K26735 - csv:101207607 921.768