Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan01g0349 ATGCGATCACTTCTCAAGCTCATCTTTATCTTCACCTTCCTTATCTGCTTTTTCACACCCCAAGCTATTTCACAATGTGAGACAGTAGTCAACAAGTGCATTGATGCAGACAAAGCTTTGCGTCTTAAAATCATTGCCATTTTTATAAACCTCATCGCTAGTGTGATCGGAGTTAGCTCACCACTCGTCACCCGATCAATCCCAATATTGCACCCTGACAGAAATTTGTTTATCATTCTCAAATCCTTCACAGCAGGCATTATTCTCGCTACTGGTTTCGTGCATGTTTTGCCAGGCTCTTTCAGCATGCTTTCATCAAATTGTTTGAAAGAGAATCCATGGCACAAGTTTCCCTTTTCGGGTTTTGTCTCCATGATGTCTGTAATCGTCACTCTCATGGTGGATTCCATGGCTACTAGTATCTATAGCAAAAACCATGCAGTAGCTATAACAAAAAATTCTCAGGAAGGAGATCAAGAGATGCCTGTGGCCAGTGGAGGCCGTTTCCATGGCCACCATCAACGCACTGATGAAGAAACTGATGTTGGTTCTCAACTGTTGCGTTATCGTGTTATTGCCATGGTTCTGGAACTGGGAATTGTAGTTCATTCTGTTGTGATTGGACTTTCACTTGGGACAGCAAATGATACCTGTACAATCAAAGGTCTAGTGGCTGCTCTTTGTTTCCATCAAATGTTTGAAGGCATGGGCCTCGGTGGCTGCATTCTCCAGGCTAAGTACAAGTGGATGAAGGCGGCAACAATGGCTTTCTTCTTTTCAGTGACAACCCCATTTGGGATTGCATTAGGGATGGGGTTGTCAAAGACGTACAAAGAGAACAGTCCAAGTGCATTGATCACTACAGGATTATTGAATGCATCATCAGCTGGTCTTCTAATCTACATGGCTCTGGTGGATCTTCTTTCTGCAGATTTTATGGGACCAAAGTTGCGGGGCAATATCAAACTCCAAATCAAATGCTACATTGGTGTGCTATTGGGAGTTGGTGGCATGTCCTTGATGGCCAGGTCGGTTCGACCCAATCCTAAACATTACCTTTTCAATGCAAAAGAAATGTAA 1080 43.24 MRSLLKLIFIFTFLICFFTPQAISQCETVVNKCIDADKALRLKIIAIFINLIASVIGVSSPLVTRSIPILHPDRNLFIILKSFTAGIILATGFVHVLPGSFSMLSSNCLKENPWHKFPFSGFVSMMSVIVTLMVDSMATSIYSKNHAVAITKNSQEGDQEMPVASGGRFHGHHQRTDEETDVGSQLLRYRVIAMVLELGIVVHSVVIGLSLGTANDTCTIKGLVAALCFHQMFEGMGLGGCILQAKYKWMKAATMAFFFSVTTPFGIALGMGLSKTYKENSPSALITTGLLNASSAGLLIYMALVDLLSADFMGPKLRGNIKLQIKCYIGVLLGVGGMSLMARSVRPNPKHYLFNAKEM 359
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 3014725 3016030 + Tan0005418.1 Tan01g0349 737773
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan01g0349 359 PANTHER ZINC/IRON TRANSPORTER 37 342 - GO:0005385(PANTHER)|GO:0005886(PANTHER)|GO:0016020(PANTHER)|GO:0071577(PANTHER)
Tan01g0349 359 Pfam ZIP Zinc transporter 41 342 IPR003689 GO:0016020(InterPro)|GO:0030001(InterPro)|GO:0046873(InterPro)|GO:0055085(InterPro)
Tan01g0349 359 NCBIfam ZIP zinc/iron transport family 31 342 IPR004698 GO:0005385(InterPro)|GO:0016020(InterPro)|GO:0071577(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan01g0349 Tan-Chr1:3014725 Tan05g2801 Tan-Chr5:80134388 6.20E-151 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan01g0349 K14709 - csv:101221552 527.324