Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan01g0415 ATGAACCCAGATTCCAATTTCCTTTTCTTCATCTCTGTTCTTCTTTTGATCATCATCTCCTTTGTTCAAATTCTTTCTGCAACTTCAACTCCAGCAGCTTTACCACTTCAGCTTCTCTCTCTGCTCTCCCTCAAATCCTCCATTAAAGACCCGTCTTCGAGTTTCCATGACTGGGACCCTACACCCACCTACTCTAAAGCTGATTTTCACGATCCAATTTGGTGTTCTTGGTCTGGAATTCAATGTCATCAGAACTCATCAGCTGAAATTACCTCGTTGGATTTGTCTCGTCGTAATCTCTCTGGCTTCATTCCCTCTGAAATCAAGTACTTAACGAGCTTAATCCACTTGAATTTGAGTGGCAACAGCTTTCTTGGGCCTTTCCCCACCGCCATTTTTGAGCTACCTCAGCTTAGAACTCTCGATATTAGTTACAATAACTTCAGCTCCACTTTCCCACCTGGGATTTCGAAGCTTAAGTTCTTGAATGTCTTCAATGCCTACAGCAACAGCTTCACTGGCCCATTACCCCAAGAAGTCGCCCATCTCCGGTTCCTTGAATGGCTCAGCCTCGGTGGGAGCTACTTCAATGGCAGTATTCCGGCGAGCTATGGCGGTTTGTCACGGTTGAGGTATTTGTATTTGGCTGGAAATGTCCTTGATGGTAAAATTCCAGGGCAACTCGCGTACTTAACGCAACTAGAGAGAATGGAAATCGGTTACAATACCTTATCCGGCGGGATTCCGGCGGAATTTTCATTGTTGTTGAATCTGAAATACTTGGATATGGCCGAAGCGAATCTCGTCGGGACTCTGCCGCAGGACATTGGGAACATGACGAAGCTTCAAAAGCTGCTTCTCTTCAAGAACCGAATCACGGGCGAAATTCCTGAAAGTTTAGGGAAATTAGAAGCGCTTAAGGAGCTTGATTTGTCGGAGAATCAACTCACCGGAAGGATTCCGTCGGATTTGTATAATCTGAAGGAATTAACAGAGTTGAGTTTAATGAGGAATGATCTCAGTGGAGAAATTCCACAAGCGGTTGGCGATCTTCCAAATCTCGCCATCTTGGGATTATGGAACAATTCGCTCACAGGGCCACTCCCTCAGAAACTTGGCTCGAACGACAAGTTACAGCATGTCGATGTATCGTCGAATATGCTCACTGGTCCGATTCCACCAAATCTCTGCCGTGGAAACAAGCTCTGGAAGCTCATTCTGTTTTCAAACAAATTAGGGCACGAACTTCCCTCCTCTTTAGCGAACTGCACGTCTCTCTCTCGCTTTCGAATCCAAAATAACCTCCTCAACGGCTCGATTCCTCACGGTTTCGGCCTGTTGGGGAATCTGACATACGCCGATTTCAGCAACAATAACTTCTCCGGCGAGATTCCGGCGGATTTTGGTAATGCGGTTAAGTTACAGTACCTGAACATTTCACAAAACGCCTTCGGAACTTCCTTGCCGGATAATATCTGGAACTCGACGAGCTTACAGATCTTCTCGGCGAGTTCTTCGAAAATCGTCGGTAGCATCCCCGATTTCGTCGGATGTAGATCCATCTACAAGATCGAACTCCAGGACAATAACTTAAACAGCAGTATTCCATGGACGATCGGTCACTGCGAGAAGTTACTCACTCTGAATTTAAGCCGCAATTCGTTAACCGGCATTATTCCATGGGAGATTTCCACGCTTCCGTCGATCACCGCCATTGATCTCTCACGAAACTTCCTCACAGGTACAATCCCTTCAAATTTCCAAAACTGTAGCACACTCGAAAGCTTCAACGTATCATACAACGAACTCACCGGACCGATTCCATCGACCGGAACAATCTTCCCGGGATTACACCCGTCGTCATTCACCGGCAACGACGGCCTCTGCGGCGAGATTCTAGCAAAACCCTGCGCCATGGACACGCTCACCGCCGGCGCGAAAGAAGTCCGGCAGCAGCAGCCACGGCGGACGGCGGGAGCAATAGTGTGGATAATGGCAGCGGCGTTTGGAATCGGACTGTTCGTATTAATAGCCGGAACGAGGTGTTTTCAGGCAAGTTACAGCCGTCGATTCGGCAGTGGCGGCGAGGAAATCGGACCGTGGAAATTAACCGCCTTTCAACGGTTGAACTTCACGGCGGAGGACGTGTTAGAGTGTTTGTCAATGACGGATAAGATCCTGGGAATGGGGTCCACTGGGACAGTGTACAAAGCGGAGATGCCAGGTGGCGAGATCATAGCAGTGAAGAAACTGTGGGGTAAATACAAAGAGAACATCCGACGGCGGAGAGGCGTTCTAGCGGAAGTGGATGTACTGGGGAACGTGCGGCACAGGAATATAGTGAGATTGTTAGGGTGCTGCAGCAACAGGGACTGTACGATGCTGCTCTACGAGTATATGCCAAATGGTAATTTGGACGATTTACTGCACGGTAAAAACAAGGGTGAAAATTTAGGGGCGGATTGGATGACAAGGTATAAAATTGCACTTGGTGTGGCACAGGGGATTTGTTATCTTCACCATGACTGTGATCCGGTGATCGTTCACCGCGATCTCAAGCCGAGTAATATTTTATTGGACGGTGAGATGGAGGCCAGAGTGGCAGATTTTGGCGTAGCTAAGTTGATCCAGACCGATGAGTCAATGTCGGTGATCGCTGGATCCTACGGTTACATTGCACCAGAGTATGCTTATACACTTCAAGTAGACGAAAAGAGTGATATTTATAGCTTCGGAGTCGTGTTGATGGAGATCTTGAGTGGTAAAAAATCTGTGGATTCTGAATTTGGTGATGGAAATAGCATAGTGGATTGGGTGAGATCGAAGATCAAGATTAAAGATGGAGTGAATGAAATATTAGACAAGAATGCTGGTTCGTGTTGTGCATCTGTTAGAGAAGAAATGATACAAATGCTTCGTGTTTCATTGCTTTGTACAAGCCGTAACCCTGCAGATCGGCCATCAATGCGCGACGTCGTTTTGATGCTACAAGAGGCAAAACCTAAGAGAAAATTACCTGCAAATGGAAACCTTGTTGATGAGAGAAATGGTAATTGTGATACCACTGATAATATAATTTGCAACCGTCGAGGTGGAGCTGGTGATGCCCTTTTAGTCCATAAGACTCTAGCTGAGTGTTAA 3141 46.8 MNPDSNFLFFISVLLLIIISFVQILSATSTPAALPLQLLSLLSLKSSIKDPSSSFHDWDPTPTYSKADFHDPIWCSWSGIQCHQNSSAEITSLDLSRRNLSGFIPSEIKYLTSLIHLNLSGNSFLGPFPTAIFELPQLRTLDISYNNFSSTFPPGISKLKFLNVFNAYSNSFTGPLPQEVAHLRFLEWLSLGGSYFNGSIPASYGGLSRLRYLYLAGNVLDGKIPGQLAYLTQLERMEIGYNTLSGGIPAEFSLLLNLKYLDMAEANLVGTLPQDIGNMTKLQKLLLFKNRITGEIPESLGKLEALKELDLSENQLTGRIPSDLYNLKELTELSLMRNDLSGEIPQAVGDLPNLAILGLWNNSLTGPLPQKLGSNDKLQHVDVSSNMLTGPIPPNLCRGNKLWKLILFSNKLGHELPSSLANCTSLSRFRIQNNLLNGSIPHGFGLLGNLTYADFSNNNFSGEIPADFGNAVKLQYLNISQNAFGTSLPDNIWNSTSLQIFSASSSKIVGSIPDFVGCRSIYKIELQDNNLNSSIPWTIGHCEKLLTLNLSRNSLTGIIPWEISTLPSITAIDLSRNFLTGTIPSNFQNCSTLESFNVSYNELTGPIPSTGTIFPGLHPSSFTGNDGLCGEILAKPCAMDTLTAGAKEVRQQQPRRTAGAIVWIMAAAFGIGLFVLIAGTRCFQASYSRRFGSGGEEIGPWKLTAFQRLNFTAEDVLECLSMTDKILGMGSTGTVYKAEMPGGEIIAVKKLWGKYKENIRRRRGVLAEVDVLGNVRHRNIVRLLGCCSNRDCTMLLYEYMPNGNLDDLLHGKNKGENLGADWMTRYKIALGVAQGICYLHHDCDPVIVHRDLKPSNILLDGEMEARVADFGVAKLIQTDESMSVIAGSYGYIAPEYAYTLQVDEKSDIYSFGVVLMEILSGKKSVDSEFGDGNSIVDWVRSKIKIKDGVNEILDKNAGSCCASVREEMIQMLRVSLLCTSRNPADRPSMRDVVLMLQEAKPKRKLPANGNLVDERNGNCDTTDNIICNRRGGAGDALLVHKTLAEC 1046
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 3797135 3802204 - Tan0001088.1 Tan01g0415 737839
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan01g0415 1046 Gene3D Ribonuclease Inhibitor 516 639 IPR032675 -
Tan01g0415 1046 Gene3D Ribonuclease Inhibitor 294 398 IPR032675 -
Tan01g0415 1046 Gene3D Ribonuclease Inhibitor 399 515 IPR032675 -
Tan01g0415 1046 FunFam Leucine-rich repeat receptor-like protein kinase 37 200 - -
Tan01g0415 1046 Pfam Leucine Rich Repeat 449 470 IPR001611 GO:0005515(InterPro)
Tan01g0415 1046 Pfam Leucine Rich Repeat 473 494 IPR001611 GO:0005515(InterPro)
Tan01g0415 1046 Pfam Leucine Rich Repeat 377 397 IPR001611 GO:0005515(InterPro)
Tan01g0415 1046 Pfam Protein kinase domain 724 993 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Tan01g0415 1046 FunFam Leucine-rich repeat receptor-like serine/threonine-protein kinase BAM1 693 799 - -
Tan01g0415 1046 FunFam Leucine-rich repeat receptor-like protein kinase TDR 325 639 - -
Tan01g0415 1046 SMART LRR_typ_2 351 375 IPR003591 -
Tan01g0415 1046 SMART LRR_typ_2 303 327 IPR003591 -
Tan01g0415 1046 SMART LRR_typ_2 207 231 IPR003591 -
Tan01g0415 1046 SMART LRR_typ_2 566 589 IPR003591 -
Tan01g0415 1046 SMART LRR_typ_2 472 495 IPR003591 -
Tan01g0415 1046 SMART LRR_typ_2 135 159 IPR003591 -
Tan01g0415 1046 Gene3D Ribonuclease Inhibitor 37 191 IPR032675 -
Tan01g0415 1046 FunFam leucine-rich repeat receptor-like protein kinase TDR 800 1008 - -
Tan01g0415 1046 ProSitePatterns Serine/Threonine protein kinases active-site signature. 847 859 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Tan01g0415 1046 SUPERFAMILY Protein kinase-like (PK-like) 724 996 IPR011009 -
Tan01g0415 1046 SUPERFAMILY L domain-like 393 630 - -
Tan01g0415 1046 Pfam Leucine rich repeat 281 340 IPR001611 GO:0005515(InterPro)
Tan01g0415 1046 Pfam Leucine rich repeat 520 577 IPR001611 GO:0005515(InterPro)
Tan01g0415 1046 Pfam Leucine rich repeat 90 148 IPR001611 GO:0005515(InterPro)
Tan01g0415 1046 ProSiteProfiles Protein kinase domain profile. 721 1000 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Tan01g0415 1046 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 26 999 IPR050647 -
Tan01g0415 1046 SUPERFAMILY RNI-like 92 436 - -
Tan01g0415 1046 FunFam Leucine-rich repeat receptor-like protein kinase PXL1 227 321 - -
Tan01g0415 1046 Gene3D Phosphorylase Kinase; domain 1 703 799 - -
Tan01g0415 1046 ProSitePatterns Protein kinases ATP-binding region signature. 727 750 IPR017441 GO:0005524(InterPro)
Tan01g0415 1046 SMART serkin_6 721 1000 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Tan01g0415 1046 Gene3D Transferase(Phosphotransferase) domain 1 800 1017 - -
Tan01g0415 1046 Gene3D Ribonuclease Inhibitor 192 293 IPR032675 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan01g0415 Tan-Chr1:3797135 Tan07g2168 Tan-Chr7:73265223 1.00E-100 dispersed
Tan01g0415 Tan-Chr1:3797135 Tan05g2466 Tan-Chr5:75814122 4.70E-90 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
66989 PF00069 Pkinase 9.10E-47 CL0016 Tan PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan01g0415 - - - 0.0