Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan01g0430 ATGACCCAGTTGCTCAATCTTGCTTTTGGAGTGGTTGCAGTTGCAGTTTTGGTCATTCTCCTTTTCATTTTCTTGAACAGAAAAGGAAAGGGGAAGGATGAATACAATGACATTGAGAGGAAACAGGAGAGGGAAAAAGGGGAAGAAGAGAGAGAAGAATTGGTGACTTTTCAAGGTGGACAGGATCTTTCCATTGTTGATATATTGGAAGCTCCTGGTGAAGTCATTGGAAAAGCCAACCATGGAACTTTGTATAAGGCTTATTTGCAGGGAAGCAGCACAGTGAGGCTGCTGAGGTTTTTGAGGCCAGTTTGTACTGCTGCCCTTGAAGATTTTGTCAGTGAGATTGAGTTTTTGGGTTCCATTAGGCACCAAAATTTGGTGCCTCTTTTGGGATTCTATTCAGGTCCAAGAGCTGAGAAGCTTCTCATTCATCCATTTTACAGGAGAGGAAATCTTGCTCAGTTCATTAGAGATGGGAATGGCGACTCACACCGATGGGCAGTGATAAACAAGATCTCGGTCGGTATGGCAAAAGGGTTGGATCATCTCCATACTGCCCTGCAAAAGCCAACAATCCATGGGAATCTACAGTCGAAAAATGTTCTTTTGGATCGAAACTACGAACCGTATATCTCCGATTTCGGCCTACATTTACTGTTGAATTCCTCTTCTGCACAAGAGGTACTTGAAGCTTCAGCAGCCAATGGCTACAAAGCTCCTGAGCTGATCAAGATTAAGGATGCAACTGAGGAGACTGACATCTATAGCTACGGCGTGATCCTACTCGAATTACTGTCCGGGAAGGAACCGATCAACGAAAAGCCAACTCCTGATGAGGATTTTTACTTGCCTAACTTTATGAGAAATGCAGTTCTTGGACATAGAATTGCAGATTTGTTCCATCCAGAAATACTTCTATATAGCAGCATTGATGGAAACACTGTTTCTGAAGAAAAGATTCTCAAATTCTTTCAGCTTGCCATGGCTTGTTGTTCTCCTTCTCCAGCTCTTAGACCAAGTATGAAGCAAGTGCTTCGGAAGCTCAACGAAATCGGAACATAA 1065 43.0 MTQLLNLAFGVVAVAVLVILLFIFLNRKGKGKDEYNDIERKQEREKGEEEREELVTFQGGQDLSIVDILEAPGEVIGKANHGTLYKAYLQGSSTVRLLRFLRPVCTAALEDFVSEIEFLGSIRHQNLVPLLGFYSGPRAEKLLIHPFYRRGNLAQFIRDGNGDSHRWAVINKISVGMAKGLDHLHTALQKPTIHGNLQSKNVLLDRNYEPYISDFGLHLLLNSSSAQEVLEASAANGYKAPELIKIKDATEETDIYSYGVILLELLSGKEPINEKPTPDEDFYLPNFMRNAVLGHRIADLFHPEILLYSSIDGNTVSEEKILKFFQLAMACCSPSPALRPSMKQVLRKLNEIGT 354
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 3925902 3928115 - Tan0002782.1 Tan01g0430 737854
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan01g0430 354 ProSiteProfiles Protein kinase domain profile. 70 354 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Tan01g0430 354 SUPERFAMILY Protein kinase-like (PK-like) 73 349 IPR011009 -
Tan01g0430 354 Coils Coil 32 52 - -
Tan01g0430 354 Gene3D Phosphorylase Kinase; domain 1 39 147 - -
Tan01g0430 354 Gene3D Transferase(Phosphotransferase) domain 1 149 354 - -
Tan01g0430 354 Pfam Protein tyrosine and serine/threonine kinase 74 349 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Tan01g0430 354 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE IMK3-RELATED 8 353 IPR052451 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan01g0430 Tan-Chr1:3925902 Tan07g0188 Tan-Chr7:4460464 6.20E-87 dispersed
Tan01g0430 Tan-Chr1:3925902 Tan07g1580 Tan-Chr7:66979630 5.50E-43 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
66990 PF07714 PK_Tyr_Ser-Thr 1.20E-31 CL0016 Tan PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan01g0430 - - - 0.0