Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan01g0444 ATGCATTTCTTTTTTCCTCTTTTCCTCTTCATTTTCTTTCTCTCCTATGCATTTAATTTCTTTTGTTTGCTCTTTAATATGATGCCCAAATGTAAAACCTTCACAATAACAACAACCCAATCCGAATTACAAGAATACCAAGATGACCACCACCATGAAAACGGCTCCTTCGCCGGCACTTCGCGGCGGCGCGTGCTCGACCCACGCGCAGCGTGGGTGCAGCGCTCGAATCGCGTGGTTCTGCTGGCGCGTGCAGCCTCTCTAGCGGTTGACCCGCTCTTCTTTTACGTCATTTTTCTGACCAAGGCCGACCCGCCCTGCTTCTACCGGGATCTGGCATTCGCCGCCGTCGTCACCGCCGTTCGCACGTGCGTCGACATGGTGCACGTGTGCCACGTGTGGATGCAGTTTCGGCTGGCGTTTGTTTCGACGGCGTCGTTGGTGGTCGGGAGTGGGCGGCTCGTGTGGGACGCACGTGCCGTTGCTACTCATTATTTGAGGTCCTTCAAAGGCTTCTGGCTCGATTTGTTTGTCATTATTCCTATTCCTCAGGTTGTGACATGGTTGATTGTGCCAAAACTATTGAGAGAAGAAGAGATAAAAAAGATGATGAAAGTGGTGTTATTGAGCTACCTATTTCAGTTTCTTCCAAAGCTTTACCACAGCATTTACTTGATGAAGAAGCTCCAAAAAGTCACTGGCTTTATCTTTGGCAGCATTTGGTGGCGCTTTAACCTCAATTTATTTGCTTATTTGATTGCTTCTCATGTTGCAGGAGGATGTTGGTATCTCCTCGCAATGCAACGGTTGATCTCATGCCTCGAACAACAATGCGAGAGAAGAAAAAATTGCAAACTGACATTGTCTTGCTCAGGCCTCAAATCTCCCATAACTGGCTACAAAGGGGCAGGTTTATTTGGATCAACTTCTTCCCATGGTAATAACTTGACAAAGATCAAGTCCTTATGCTTGGAGGTCAATGGACCATTTAGCTATGGAATTTATGAGCCTGTTCTTTTGGTATTCTCTAGCAACTCTCTAGCTGTTAGAATTCTTTATCCTGTCTTCTGGGGTTTATTGAACTTGAGTTCCTTTGGCAATGAGCTTGATCCCACAAGTAATTTGGTTGAAGTGATTTTCAGTAGCTGCATCACACTTGCAGGGTTGGTGCTGTTTGTTACCTTAATTGGAAATATACAGATTTTCTTGCAAACTGTTATGGCAAGTAAGGAGAATATGCAAATACGGTTTCGAGATATGAAATGGTGGATGAGGAGGCGACAATTGCCTGTTCATTTGAGGGAAAGGGTTTGCAATTTTGAGTATCAAAGGTGGGAAGCCATGGGAGGGCTCGATGAGACCGAGCTCATCGGAGGGCTGCCCGACGGCCTCCGCCGAGACATCAAACGCTACCTTTGTTTAGACCTTATTAAGAAGGTACCTTTCTTCCACATGTTGGATGATCTCATACTCGATAACATTTGTGATCGTGTTAAACCGCTCTTATACGCCGAAGGTGAAAAGATAGTAAGGGAGGGAGATCCTGTGCAAAGGATGGTGTTCATTGTTGAAGGATGTGTAGAGCGTAGCCAAGGCTGCCTTGGCAAAGGCTTTGTAGGCACGAGTTGGCTCAACTCCGGTGCCTTTTTCGGCGAGGAGCTACTCTCGTGGTGTCTCCGACTCCGACACCGTCCATATCTCGATAAGCTTCCAACCTCCTTGGCAACATTTTCTTGTGTACAGCCAGTAGAAGCATATAGCCTCGACGCACTCGATCTTCGGTACATTATCGAACACTTTCGATATAAGTTTGCAAGTGAAAAGCTCAAGCAAACCATGCGCTATTACTCTTCCAATTGGCGAACATGGGGAGCTGTGATCATTCAGTTTTCATGGCGTCGCCACCGGATACGAAGTCAAGGTTACACGACACGAAACCGAACAGCTGAAAATCGACTAAGGCAGTATGCTGCAGTTTTCTTGTCAATGAAGCCGAATGATCATCTTGAGTAG 2013 46.4 MHFFFPLFLFIFFLSYAFNFFCLLFNMMPKCKTFTITTTQSELQEYQDDHHHENGSFAGTSRRRVLDPRAAWVQRSNRVVLLARAASLAVDPLFFYVIFLTKADPPCFYRDLAFAAVVTAVRTCVDMVHVCHVWMQFRLAFVSTASLVVGSGRLVWDARAVATHYLRSFKGFWLDLFVIIPIPQVVTWLIVPKLLREEEIKKMMKVVLLSYLFQFLPKLYHSIYLMKKLQKVTGFIFGSIWWRFNLNLFAYLIASHVAGGCWYLLAMQRLISCLEQQCERRKNCKLTLSCSGLKSPITGYKGAGLFGSTSSHGNNLTKIKSLCLEVNGPFSYGIYEPVLLVFSSNSLAVRILYPVFWGLLNLSSFGNELDPTSNLVEVIFSSCITLAGLVLFVTLIGNIQIFLQTVMASKENMQIRFRDMKWWMRRRQLPVHLRERVCNFEYQRWEAMGGLDETELIGGLPDGLRRDIKRYLCLDLIKKVPFFHMLDDLILDNICDRVKPLLYAEGEKIVREGDPVQRMVFIVEGCVERSQGCLGKGFVGTSWLNSGAFFGEELLSWCLRLRHRPYLDKLPTSLATFSCVQPVEAYSLDALDLRYIIEHFRYKFASEKLKQTMRYYSSNWRTWGAVIIQFSWRRHRIRSQGYTTRNRTAENRLRQYAAVFLSMKPNDHLE 670
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 4120342 4125566 - Tan0012987.1 Tan01g0444 737868
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan01g0444 670 CDD CAP_ED 482 599 IPR000595 -
Tan01g0444 670 Gene3D Jelly Rolls 480 602 IPR014710 -
Tan01g0444 670 SUPERFAMILY Voltage-gated potassium channels 72 404 - -
Tan01g0444 670 Gene3D Helix hairpin bin 408 473 - -
Tan01g0444 670 PANTHER CYCLIC NUCLEOTIDE-GATED ION CHANNEL 15-RELATED-RELATED 52 653 - -
Tan01g0444 670 SUPERFAMILY cAMP-binding domain-like 409 600 IPR018490 -
Tan01g0444 670 ProSiteProfiles cAMP/cGMP binding motif profile. 482 555 IPR000595 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan01g0444 Tan-Chr1:4120342 Tan11g0453 Tan-Chr11:3663641 4.30E-214 dispersed
Tan01g0444 Tan-Chr1:4120342 Tan07g1336 Tan-Chr7:62795370 6.00E-99 transposed
Tan01g0444 Tan-Chr1:4120342 Tan05g0241 Tan-Chr5:1824058 6.00E-99 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan01g0444 K05391 - cit:102621025 800.816