Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan01g0446 ATGCCTGGCATACCTCTTGTGGCTCGTGAAACTTCCTGTTCCAGAAACGCAGATCAGATGTGCCGTGTAGAATCTCGTGTTCATCTATCTGAAGAAGAGGAAATTGCTGCGGAAGAGAGCCTTTCACTTTACTGCAAGCCGGTTGAACTCTATAACATTCTTCAACGCCGGGCTATTAGAAATCCATTGTTTCTTCAAAGATGTTTAAACTACAAAATAGAGACAAAACACAAGAGAAGGATCCAGATGACAATTTCAATTTCTAGGACTCTGAGTGGGGGTGGCCAGACACATAATCTGTTTCCTATGTATGTCATCTTGGGAAGATTAGTCTCTGACATTGCAGTTGCTGAGTTCTCTGGTGTATATCGCTTCAGTCGAGCTTGCCTCTTAACTGGCATCAACAGAGTGGAATGCAATTCTCATGTTATAGCTAATTTCATCCTTCCTGAAATTAACAAGCTAGCTGTGGAGGCCAAATCTGGGTCCCTTGCTATATTATTTGTTAGCTGCGTTGGACCCACAAATACTTTGTCCGGAGTAGATTCAGTTGATGGGCCTCTATACATGGCATCTGTTCCAGTTGCAGGTTACTGCTTATGGGGCAAGATACCTCTGGAATCACTTTACATTTCGTGGCAGAATTCTTCAAATTTTGGTCTTGGACAGAGGGCCGAGATAATGTCAACTGTTGATATGCGCTCTTGTGTCCTGAAGACAAGTTGCTTGGATGGAGAGAAGTGTCTAGGATTTCAAATTCCATATAATTCTGATTCTATGCATACAGCACAGCAAGTACAGGTCACAATTTCTGCAGAAGAGTTTGGTGCTAGGGATAAATCTCCGTATGATTCATACACATACAGTGAAATTCCTTCCTCATCACTATCTCATATGATTCGGTTGAGAGCGGGAAATGTTATTTTCAATTATAGGTACTACAACAATAGATTGCAAAAAACTGAAGTAACTGAAGACTTTTCCTGTCCATTTTGCTTGGTTAAATGTGCAAGCTTTAAGGGCTTGAGATGTCACTTGTTATCTTTACACGATCTCTTCAACTTTGAATTTTGGGTAACTGAAGAGTATCAAGCTGTAAATGTTTCCACGAAGACTGATGTTTGGCGGTCAGAGATCATCACAGATGGCATTGATCCAAAGCAGCAGACATTCTTCTTCCGTTCAAGGCATCTCAGACGCAAAAAAGTTAAGAATGTAGTACAAAGTGGAAAGCACGTACATCCCTTTGTTGTAGAGTCTGAATATTCGGACAAGGCGGATGATGCTCAATCTAGCAAAGGTGAAAAGGCTCAAATATCAGGGCACAATATCGCACCAACTATGCTTCAATTTGCCAAGACAAGAAAATTGTCGATTGAACGTGCAGACCCAAGACACTGTACCCTCCTAAGGAAGAGACAGTTCTTTCATTCCCACAGAGCTCAGCCAATGGCACTGGAACAAGTGTTATCAGATCGAGATAGTGAAGATGAAGTGGATGATGATGTTGCAGATCTTGAGGATAGGAGGATGCTCGATGACTTTGTCGATGTAACCAAGGATGAGAAGCAAATGATGCATATGTGGAACTCATTTGTCAGGAAGCAACGGGTGCTGGCTGATGGCCATATCCCTTGGGCTTGTGAGGCATTTTCACAATTACATGGACCAAACCTTGTCAAAACTCCAGCTCTTCTATGGTGCTGGAGATTGTTTATGATTAAGTTGTGGAACCATGGTCTACTTGATGCAAACTCCATGAACAGTTGTAACATTATTCTTGAAAGAATACATACTGAAGCTTCCGATCCTAAAAGCTGA 1821 41.79 MPGIPLVARETSCSRNADQMCRVESRVHLSEEEEIAAEESLSLYCKPVELYNILQRRAIRNPLFLQRCLNYKIETKHKRRIQMTISISRTLSGGGQTHNLFPMYVILGRLVSDIAVAEFSGVYRFSRACLLTGINRVECNSHVIANFILPEINKLAVEAKSGSLAILFVSCVGPTNTLSGVDSVDGPLYMASVPVAGYCLWGKIPLESLYISWQNSSNFGLGQRAEIMSTVDMRSCVLKTSCLDGEKCLGFQIPYNSDSMHTAQQVQVTISAEEFGARDKSPYDSYTYSEIPSSSLSHMIRLRAGNVIFNYRYYNNRLQKTEVTEDFSCPFCLVKCASFKGLRCHLLSLHDLFNFEFWVTEEYQAVNVSTKTDVWRSEIITDGIDPKQQTFFFRSRHLRRKKVKNVVQSGKHVHPFVVESEYSDKADDAQSSKGEKAQISGHNIAPTMLQFAKTRKLSIERADPRHCTLLRKRQFFHSHRAQPMALEQVLSDRDSEDEVDDDVADLEDRRMLDDFVDVTKDEKQMMHMWNSFVRKQRVLADGHIPWACEAFSQLHGPNLVKTPALLWCWRLFMIKLWNHGLLDANSMNSCNIILERIHTEASDPKS 606
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 4139833 4153792 - Tan0009036.1 Tan01g0446 737870
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan01g0446 606 PANTHER POLYCOMB GROUP PROTEIN 1 605 - GO:0005634(PANTHER)|GO:0031490(PANTHER)
Tan01g0446 606 CDD ZnB-Zn_EMF2-like 296 375 - -
Tan01g0446 606 Pfam VEFS-Box of polycomb protein 457 592 IPR019135 -
Tan01g0446 606 CDD VEFS-box_EMF2-like 470 597 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan01g0446 Tan-Chr1:4139833 Tan01g0448 Tan-Chr1:4139833 5.70E-298 dispersed
Tan01g0446 Tan-Chr1:4139833 Tan01g0447 Tan-Chr1:4139833 0.00E+00 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan01g0446 - - - 0.0