Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan01g0447 ATGCCTGGCATACCTCTTGTGGCTCGTGAAACTTCCTGTTCCAGAAACGCAGATCAGATGTGCCGTGTAGAATCTCGTGTTCATCTATCTGAAGAAGAGGAAATTGCTGCGGAAGAGAGCCTTTCACTTTACTGCAAGCCGGTTGAACTCTATAACATTCTTCAACGCCGGGCTATTAGAAATCCATTGTTTCTTCAAAGATGTTTAAACTACAAAATAGAGACAAAACACAAGAGAAGGATCCAGATGACAATTTCAATTTCTAGGACTCTGAGTGGGGGTGGCCAGACACATAATCTGTTTCCTATGTATGTCATCTTGGGAAGATTAGTCTCTGACATTGCAGTTGCTGAGTTCTCTGGTGTATATCGCTTCAGTCGAGCTTGCCTCTTAACTGGCATCAACAGAGTGGAATGCAATTCTCATGTTATAGCTAATTTCATCCTTCCTGAAATTAACAAGCTAGCTGTGGAGGCCAAATCTGGGTCCCTTGCTATATTATTTGTTAGCTGCGTTGGACCCACAAATACTTTGTCCGGAGTAGATTCAGTTGATGGGCCTCTATACATGGCATCTGTTCCAGTTGCAGGTTACTGCTTATGGGGCAAGATACCTCTGGAATCACTTTACATTTCGTGGCAGAATTCTTCAAATTTTGGTCTTGGACAGAGGGCCGAGATAATGTCAACTGTTGATATGCGCTCTTGTGTCCTGAAGACAAGTTGCTTGGATGGAGAGAAGTGTCTAGGATTTCAAATTCCATATAATTCTGATTCTATGCATACAGCACAGCAAGTACAGGTCACAATTTCTGCAGAAGAGTTTGGTGCTAGGGATAAATCTCCGTATGATTCATACACATACAGTGAAATTCCTTCCTCATCACTATCTCATATGATTCGGTTGAGAGCGGGAAATGTTATTTTCAATTATAGGTACTACAACAATAGATTGCAAAAAACTGAAGTAACTGAAGACTTTTCCTGTCCATTTTGCTTGGTTAAATGTGCAAGCTTTAAGGGCTTGAGATGTCACTTGTTATCTTTACACGATCTCTTCAACTTTGAATTTTGGGTAACTGAAGAGTATCAAGCTGTAAATGTTTCCACGAAGACTGATGTTTGGCGGTCAGAGATCATCACAGATGGCATTGATCCAAAGCAGCAGACATTCTTCTTCCGTTCAAGGCATCTCAGACGCAAAAAAGTTAAGAATGTAGTACAAAGTGGAAAGCACGTACATCCCTTTGTTGTAGAGTCTGAATATTCGGACAAGGCGGATGATGCTCAATCTAGCAAAGGTGAAAAGGCTCAAATATCAGGTTTTTTAAGTACCTCTCTGCATTCATCCAATGATCCTGACTGCATTCAATCAATATCAGGGCACAATATCGCACCAACTATGCTTCAATTTGCCAAGACAAGAAAATTGTCGATTGAACGTGCAGACCCAAGACACTGTACCCTCCTAAGGAAGAGACAGTTCTTTCATTCCCACAGAGCTCAGCCAATGGCACTGGAACAAGTGTTATCAGATCGAGATAGTGAAGATGAAGTGGATGATGATGTTGCAGATCTTGAGGATAGGAGGATGCTCGATGACTTTGTCGATGTAACCAAGGATGAGAAGCAAATGATGCATATGTGGAACTCATTTGTCAGGAAGCAACGGGTGCTGGCTGATGGCCATATCCCTTGGGCTTGTGAGGCATTTTCACAATTACATGGACCAAACCTTGTCAAAACTCCAGCTCTTCTATGGTGCTGGAGATTGTTTATGATTAAGTTGTGGAACCATGGTCTACTTGATGCAAACTCCATGAACAGTTGTAACATTATTCTTGAAAGAATACATACTGAAGCTTCCGATCCTAAAAGCTGA 1881 41.63 MPGIPLVARETSCSRNADQMCRVESRVHLSEEEEIAAEESLSLYCKPVELYNILQRRAIRNPLFLQRCLNYKIETKHKRRIQMTISISRTLSGGGQTHNLFPMYVILGRLVSDIAVAEFSGVYRFSRACLLTGINRVECNSHVIANFILPEINKLAVEAKSGSLAILFVSCVGPTNTLSGVDSVDGPLYMASVPVAGYCLWGKIPLESLYISWQNSSNFGLGQRAEIMSTVDMRSCVLKTSCLDGEKCLGFQIPYNSDSMHTAQQVQVTISAEEFGARDKSPYDSYTYSEIPSSSLSHMIRLRAGNVIFNYRYYNNRLQKTEVTEDFSCPFCLVKCASFKGLRCHLLSLHDLFNFEFWVTEEYQAVNVSTKTDVWRSEIITDGIDPKQQTFFFRSRHLRRKKVKNVVQSGKHVHPFVVESEYSDKADDAQSSKGEKAQISGFLSTSLHSSNDPDCIQSISGHNIAPTMLQFAKTRKLSIERADPRHCTLLRKRQFFHSHRAQPMALEQVLSDRDSEDEVDDDVADLEDRRMLDDFVDVTKDEKQMMHMWNSFVRKQRVLADGHIPWACEAFSQLHGPNLVKTPALLWCWRLFMIKLWNHGLLDANSMNSCNIILERIHTEASDPKS 626
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 4139833 4153792 - Tan0009036.2 Tan01g0447 737871
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan01g0447 626 PANTHER POLYCOMB GROUP PROTEIN 1 625 - GO:0005634(PANTHER)|GO:0031490(PANTHER)
Tan01g0447 626 CDD ZnB-Zn_EMF2-like 296 375 - -
Tan01g0447 626 Pfam VEFS-Box of polycomb protein 477 612 IPR019135 -
Tan01g0447 626 CDD VEFS-box_EMF2-like 490 617 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan01g0447 Tan-Chr1:4139833 Tan01g0449 Tan-Chr1:4139833 2.30E-294 dispersed
Tan01g0446 Tan-Chr1:4139833 Tan01g0447 Tan-Chr1:4139833 0.00E+00 tandem
Tan01g0447 Tan-Chr1:4139833 Tan01g0448 Tan-Chr1:4139833 2.30E-294 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan01g0447 - - - 0.0