Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan01g0449 ATGCCTGGCATACCTCTTGTGGCTCGTGAAACTTCCTGTTCCAGAAACGCAGATCAGATGTGCCGTGTAGAATCTCGTGTTCATCTATCTGAAGAAGAGGAAATTGCTGCGGAAGAGAGCCTTTCACTTTACTGCAAGCCGGTTGAACTCTATAACATTCTTCAACGCCGGGCTATTAGAAATCCATTGTTTCTTCAAAGATGTTTAAACTACAAAATAGAGACAAAACACAAGAGAAGGATCCAGATGACAATTTCAATTTCTAGGACTCTGAGTGGGGGTGGCCAGACACATAATCTGTTTCCTATGTATGTCATCTTGGGAAGATTAGTCTCTGACATTGCAGTTGCTGAGTTCTCTGGTGTATATCGCTTCAGTCGAGCTTGCCTCTTAACTGGCATCAACAGAGTGGAATGCAATTCTCATGTTATAGCTAATTTCATCCTTCCTGAAATTAACAAGCTAGCTGTGGAGGCCAAATCTGGGTCCCTTGCTATATTATTTGTTAGCTGCGTTGGACCCACAAATACTTTGTCCGGAGTAGATTCAGTTGATGGGCCTCTATACATGGCATCTGTTCCAGTTGCAGGTTACTGCTTATGGGGCAAGATACCTCTGGAATCACTTTACATTTCGTGGCAGAATTCTTCAAATTTTGGTCTTGGACAGAGGGCCGAGATAATGTCAACTGTTGATATGCGCTCTTGTGTCCTGAAGACAAGTTGCTTGGATGGAGAGAAGTGTCTAGGATTTCAAATTCCATATAATTCTGATTCTATGCATACAGCACAGCAAGTACAGGTCACAATTTCTGCAGAAGAGTTTGGTGCTAGGGATAAATCTCCGTATGATTCATACACATACAGTGAAATTCCTTCCTCATCACTATCTCATATGATTCGGTTGAGAGCGGGAAATGTTATTTTCAATTATAGGTACTACAACAATAGATTGCAAAAAACTGAAGTAACTGAAGACTTTTCCTGTCCATTTTGCTTGGTTAAATGTGCAAGCTTTAAGGGCTTGAGATGTCACTTGTTATCTTTACACGATCTCTTCAACTTTGAATTTTGGGTAACTGAAGAGTATCAAGCTGTAAATGTTTCCACGAAGACTGATGTTTGGCGGTCAGAGATCATCACAGATGGCATTGATCCAAAGCAGCAGACATTCTTCTTCCGTTCAAGGCATCTCAGACGCAAAAAAGTTAAGAATGTAGTACAAAGTGGAAAGCACGTACATCCCTTTGTTGTAGAGTCTGAATATTCGGACAAGGCGGATGATGCTCAATCTAGCAAAGGTGAAAAGGCTCAAATATCAGGGCACAATATCGCACCAACTATGCTTCAATTTGCCAAGACAAGAAAATTGTCGATTGAACGTGCAGACCCAAGACACTGTACCCTCCTAAGGAAGAGACAGTTCTTTCATTCCCACAGAGCTCAGCCAATGGCACTGGAACAAGTGTTATCAGATCGAGATAGTGAAGATGAAGTGGATGATGATGTTGCAGATCTTGAGGATAGGAGGGTAAGGTTTGAAGTTTTGATAACACCTGATAGCTAA 1566 41.57 MPGIPLVARETSCSRNADQMCRVESRVHLSEEEEIAAEESLSLYCKPVELYNILQRRAIRNPLFLQRCLNYKIETKHKRRIQMTISISRTLSGGGQTHNLFPMYVILGRLVSDIAVAEFSGVYRFSRACLLTGINRVECNSHVIANFILPEINKLAVEAKSGSLAILFVSCVGPTNTLSGVDSVDGPLYMASVPVAGYCLWGKIPLESLYISWQNSSNFGLGQRAEIMSTVDMRSCVLKTSCLDGEKCLGFQIPYNSDSMHTAQQVQVTISAEEFGARDKSPYDSYTYSEIPSSSLSHMIRLRAGNVIFNYRYYNNRLQKTEVTEDFSCPFCLVKCASFKGLRCHLLSLHDLFNFEFWVTEEYQAVNVSTKTDVWRSEIITDGIDPKQQTFFFRSRHLRRKKVKNVVQSGKHVHPFVVESEYSDKADDAQSSKGEKAQISGHNIAPTMLQFAKTRKLSIERADPRHCTLLRKRQFFHSHRAQPMALEQVLSDRDSEDEVDDDVADLEDRRVRFEVLITPDS 521
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 4139833 4153792 - Tan0009036.4 Tan01g0449 737873
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan01g0449 521 PANTHER POLYCOMB GROUP PROTEIN 1 510 - GO:0005634(PANTHER)|GO:0031490(PANTHER)
Tan01g0449 521 CDD ZnB-Zn_EMF2-like 296 375 - -
Tan01g0449 521 Pfam VEFS-Box of polycomb protein 457 510 IPR019135 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan01g0447 Tan-Chr1:4139833 Tan01g0449 Tan-Chr1:4139833 2.30E-294 dispersed
Tan01g0449 Tan-Chr1:4139833 Tan01g2084 Tan-Chr1:23879534 4.80E-11 dispersed
Tan01g0448 Tan-Chr1:4139833 Tan01g0449 Tan-Chr1:4139833 9.60E-299 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan01g0449 - - - 0.0