Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Tan01g0498 | ATGTCGTTAATATTGGGTTCTTCGTCTTCTCTGTGGATCATTTTGGTGCTCGGTTTTGTTTCGCTGATCTCTGCTAATATTGAAGGCGATGCTTTGATTGCATTGAAGTCAAATTTACTAGATCCCAATGGCGTACTGCAGAATTGGGATTCTTCGCTTGTTAATCCCTGCACATGGTTCCATGTCACCTGTGACAGTGGTAATGTCACTCGAGTTGATCTTGGAAATGCAAATCTAACTGGCACGTTAGTTCCACAGCTTGGCCAGCTTCAGAGTTTACAGTATCTGGAACTTTATAGTAACAATATTAGTGGAGGAATTCCGGAGGAGCTTGGGGAGTTGACAAATTTGGAGAGCTTGGATCTTTACTTGAACAATTTAACTGGTCCCATACCCGTCAGATTTGGCCAGCTTAGAAAACTGCGTTTCCTGCGTCTTAACAACAACAGCTTATCAGGAACTATTCCAATGTCATTAACTGCTGTTAAATCCTTGCAAGTCCTGGATCTTTCATATAACCACCTAACTGGAGATATTCCTGTCAATGGTTCTTTTTCTCTTTTTACCCCTATCAGTTTTGCTCATAACAATCTTAATCAGTCTGCCGTACATACTCCACCACCTCCTTTACCTTCTTCACCAAGCCCCGCATCAGGTAATAGTGTCACTGGAGCTATTGCTGGTGGAGTTGCTGCTGCTGCCGTTTTACTGTTTGCTGCTCCTACTGTTGCAGTTGCTCTCTGGCGTCGGAAGAAACCACAAGACAGTTTCTTTGATGTACCTGCCGAAGAGGATCCAGAAGTTCATCTTGGTCAGCTCAAAAGGTTCTCTCTGCGTGAACTACAAGTTGCAACAGATCATTTTAGCAACAAACATATTCTAGGTAAAGGTGGTTTTGGCAAGGTCTACAAGGGACGGCTGGCTGATGGATCTCTTGTGGCAGTTAAAAGACTTAAAGAGGAACGTTCTCAGGGTGGGGAGCTGCAATTTCAAACAGAAGTAGAGATGATCAGCATGGCTGTGCATCGTAATTTGCTCCGCCTGCATGGCTTTTGTATGACACCGACTGAGCGGTTGCTGGTTTATCCATTTATGGTTAATGGAAGTCTAGCATCGTGTTTAAGAGAACGTTTAAAAACACAGCCTCCACTTAATTGGTTAAATCGAAAACGCATTGCTTTGGGAGCTGCAAGGGGGCTTGCTTATCTACATGATCATTGCAATCCTAAGATTATCCATCGTGATGTGAAAGCTGCAAACATTTTGCTTGATGAGGAGTTTGAAGCCGTCGTTGGTGATTTTGGGTTGGCTAAACTCATGGACTACAAAGATACTCATGTAACAACTGTTGTACGTGGAACAATTGGGCATATAGCGCCAGAGTACCTTTCGACTGGAAAGTCTTCTGAAAAGACTGATGTTTTTGGGTATGGGGTAATGCTGCTTGAACTCATAACTGGACAGAGGGCCTTTGATCTTGCCCGGCTTGCAAATAATGATGATGTCATGCTTCTTGACTGGGTGAAAGGACTTCTAAAAGACAAGAGGCTGGAAATACTAGTAGATCCCAATCTTGCGGGAGACTATCCTGATAACGAAGTCGAGCAGCTTATTCAAATTGCCTTGTTGTGCACACAAGGCACTCCTTCAGAGCGGCCTAAGATGTCGGGGATTGTACGGATGCTTGAGGGTGATGGTTTAGCTGATAGATGGGAAGAATGGCAGAACGAGGAGCGGTTCCATCAAGAAGTAAGCCACAATCCTCACCCAAATGCTACTTGGATTCTTGACTCTACTTCTGAAATGCCTCCTGATGAATTGTCTGGTCCAAGATGA | 1836 | 44.01 | MSLILGSSSSLWIILVLGFVSLISANIEGDALIALKSNLLDPNGVLQNWDSSLVNPCTWFHVTCDSGNVTRVDLGNANLTGTLVPQLGQLQSLQYLELYSNNISGGIPEELGELTNLESLDLYLNNLTGPIPVRFGQLRKLRFLRLNNNSLSGTIPMSLTAVKSLQVLDLSYNHLTGDIPVNGSFSLFTPISFAHNNLNQSAVHTPPPPLPSSPSPASGNSVTGAIAGGVAAAAVLLFAAPTVAVALWRRKKPQDSFFDVPAEEDPEVHLGQLKRFSLRELQVATDHFSNKHILGKGGFGKVYKGRLADGSLVAVKRLKEERSQGGELQFQTEVEMISMAVHRNLLRLHGFCMTPTERLLVYPFMVNGSLASCLRERLKTQPPLNWLNRKRIALGAARGLAYLHDHCNPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTVVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANNDDVMLLDWVKGLLKDKRLEILVDPNLAGDYPDNEVEQLIQIALLCTQGTPSERPKMSGIVRMLEGDGLADRWEEWQNEERFHQEVSHNPHPNATWILDSTSEMPPDELSGPR | 611 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
1 | 4601760 | 4612645 | + | Tan0016727.1 | Tan01g0498 | 737922 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Tan01g0498 | 611 | Gene3D | Ribonuclease Inhibitor | 24 | 205 | IPR032675 | - | |
Tan01g0498 | 611 | Gene3D | Transferase(Phosphotransferase) domain 1 | 365 | 582 | - | - | |
Tan01g0498 | 611 | Pfam | Leucine rich repeat N-terminal domain | 28 | 65 | IPR013210 | - | |
Tan01g0498 | 611 | ProSitePatterns | Protein kinases ATP-binding region signature. | 294 | 316 | IPR017441 | GO:0005524(InterPro) | |
Tan01g0498 | 611 | SUPERFAMILY | L domain-like | 29 | 201 | - | - | |
Tan01g0498 | 611 | Pfam | Leucine Rich Repeat | 164 | 181 | IPR001611 | GO:0005515(InterPro) | |
Tan01g0498 | 611 | Pfam | Leucine Rich Repeat | 92 | 114 | IPR001611 | GO:0005515(InterPro) | |
Tan01g0498 | 611 | Pfam | Leucine Rich Repeat | 116 | 138 | IPR001611 | GO:0005515(InterPro) | |
Tan01g0498 | 611 | Pfam | Leucine Rich Repeat | 140 | 159 | IPR001611 | GO:0005515(InterPro) | |
Tan01g0498 | 611 | FunFam | Somatic embryogenesis receptor kinase 1 | 257 | 364 | - | - | |
Tan01g0498 | 611 | SUPERFAMILY | Protein kinase-like (PK-like) | 267 | 563 | IPR011009 | - | |
Tan01g0498 | 611 | ProSiteProfiles | Protein kinase domain profile. | 288 | 572 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Tan01g0498 | 611 | FunFam | Somatic embryogenesis receptor-like kinase 1 | 365 | 582 | - | - | |
Tan01g0498 | 611 | SMART | serkin_6 | 288 | 562 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Tan01g0498 | 611 | PANTHER | SOMATIC EMBRYOGENESIS RECEPTOR KINASE 1 | 13 | 610 | - | - | |
Tan01g0498 | 611 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 411 | 423 | IPR008271 | GO:0004672(InterPro)|GO:0006468(InterPro) | |
Tan01g0498 | 611 | MobiDBLite | consensus disorder prediction | 199 | 219 | - | - | |
Tan01g0498 | 611 | Gene3D | Phosphorylase Kinase; domain 1 | 257 | 364 | - | - | |
Tan01g0498 | 611 | Pfam | Protein tyrosine and serine/threonine kinase | 291 | 562 | IPR001245 | GO:0004672(InterPro)|GO:0006468(InterPro) | |
Tan01g0498 | 611 | MobiDBLite | consensus disorder prediction | 581 | 611 | - | - | |
Tan01g0498 | 611 | FunFam | Somatic embryogenesis receptor kinase 1 | 24 | 210 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Tan01g0498 | Tan-Chr1:4601760 | Tan10g1711 | Tan-Chr10:43391278 | 1.10E-219 | dispersed | |
Tan01g0496 | Tan-Chr1:4562267 | Tan01g0498 | Tan-Chr1:4601760 | 2.10E-255 | proximal | |
Tan01g0498 | Tan-Chr1:4601760 | Tan01g0499 | Tan-Chr1:4603783 | 8.60E-246 | tandem |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
66992 | PF00069 | Pkinase | 1.50E-44 | CL0016 | Tan | PK |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Tan01g0498 | K13416 | - | csv:101216389 | 1019.22 |