Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan01g0499 ATGGTTCTTTTTCTCTTTTTACCCCTATCAGGTGATAAGCTTTGTGTGTCTTGTTGTTTTTCTTTCTTTATCAGATTACAGCAGCCCGTTGCTGACCGTCCTTCTCCATGCAGTTTTGCTCATAACAATCTTAATCAGTCTGCCGTACATACTCCACCACCTCCTTTACCTTCTTCACCAAGCCCCGCATCAGGTAATAGTGTCACTGGAGCTATTGCTGGTGGAGTTGCTGCTGCTGCCGTTTTACTGTTTGCTGCTCCTACTGTTGCAGTTGCTCTCTGGCGTCGGAAGAAACCACAAGACAGTTTCTTTGATGTACCTGCCGAAGAGGATCCAGAAGTTCATCTTGGTCAGCTCAAAAGGTTCTCTCTGCGTGAACTACAAGTTGCAACAGATCATTTTAGCAACAAACATATTCTAGGTAAAGGTGGTTTTGGCAAGGTCTACAAGGGACGGCTGGCTGATGGATCTCTTGTGGCAGTTAAAAGACTTAAAGAGGAACGTTCTCAGGGTGGGGAGCTGCAATTTCAAACAGAAGTAGAGATGATCAGCATGGCTGTGCATCGTAATTTGCTCCGCCTGCATGGCTTTTGTATGACACCGACTGAGCGGTTGCTGGTTTATCCATTTATGGTTAATGGAAGTCTAGCATCGTGTTTAAGAGAACGTTTAAAAACACAGCCTCCACTTAATTGGTTAAATCGAAAACGCATTGCTTTGGGAGCTGCAAGGGGGCTTGCTTATCTACATGATCATTGCAATCCTAAGATTATCCATCGTGATGTGAAAGCTGCAAACATTTTGCTTGATGAGGAGTTTGAAGCCGTCGTTGGTGATTTTGGGTTGGCTAAACTCATGGACTACAAAGATACTCATGTAACAACTGTTGTACGTGGAACAATTGGGCATATAGCGCCAGAGTACCTTTCGACTGGAAAGTCTTCTGAAAAGACTGATGTTTTTGGGTATGGGGTAATGCTGCTTGAACTCATAACTGGACAGAGGGCCTTTGATCTTGCCCGGCTTGCAAATAATGATGATGTCATGCTTCTTGACTGGGTGAAAGGACTTCTAAAAGACAAGAGGCTGGAAATACTAGTAGATCCCAATCTTGCGGGAGACTATCCTGATAACGAAGTCGAGCAGCTTATTCAAATTGCCTTGTTGTGCACACAAGGCACTCCTTCAGAGCGGCCTAAGATGTCGGGGATTGTACGGATGCTTGAGGGTGATGGTTTAGCTGATAGATGGGAAGAATGGCAGAACGAGGAGCGGTTCCATCAAGAAGTAAGCCACAATCCTCACCCAAATGCTACTTGGATTCTTGACTCTACTTCTGAAATGCCTCCTGATGAATTGTCTGGTCCAAGATGA 1374 44.83 MVLFLFLPLSGDKLCVSCCFSFFIRLQQPVADRPSPCSFAHNNLNQSAVHTPPPPLPSSPSPASGNSVTGAIAGGVAAAAVLLFAAPTVAVALWRRKKPQDSFFDVPAEEDPEVHLGQLKRFSLRELQVATDHFSNKHILGKGGFGKVYKGRLADGSLVAVKRLKEERSQGGELQFQTEVEMISMAVHRNLLRLHGFCMTPTERLLVYPFMVNGSLASCLRERLKTQPPLNWLNRKRIALGAARGLAYLHDHCNPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTVVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANNDDVMLLDWVKGLLKDKRLEILVDPNLAGDYPDNEVEQLIQIALLCTQGTPSERPKMSGIVRMLEGDGLADRWEEWQNEERFHQEVSHNPHPNATWILDSTSEMPPDELSGPR 457
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 4603783 4612645 + Tan0016727.2 Tan01g0499 737923
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan01g0499 457 ProSitePatterns Protein kinases ATP-binding region signature. 140 162 IPR017441 GO:0005524(InterPro)
Tan01g0499 457 PANTHER SOMATIC EMBRYOGENESIS RECEPTOR KINASE 1 39 456 - -
Tan01g0499 457 Pfam Protein tyrosine and serine/threonine kinase 137 408 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Tan01g0499 457 ProSiteProfiles Protein kinase domain profile. 134 418 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Tan01g0499 457 SUPERFAMILY Protein kinase-like (PK-like) 113 409 IPR011009 -
Tan01g0499 457 Gene3D Phosphorylase Kinase; domain 1 103 210 - -
Tan01g0499 457 ProSitePatterns Serine/Threonine protein kinases active-site signature. 257 269 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Tan01g0499 457 MobiDBLite consensus disorder prediction 427 457 - -
Tan01g0499 457 Gene3D Transferase(Phosphotransferase) domain 1 211 428 - -
Tan01g0499 457 SMART serkin_6 134 408 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Tan01g0499 457 FunFam Somatic embryogenesis receptor-like kinase 1 211 428 - -
Tan01g0499 457 FunFam Somatic embryogenesis receptor kinase 1 103 210 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan01g0499 Tan-Chr1:4603783 Tan10g1711 Tan-Chr10:43391278 1.10E-189 dispersed
Tan01g0498 Tan-Chr1:4601760 Tan01g0499 Tan-Chr1:4603783 8.60E-246 tandem
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
66993 PF00069 Pkinase 7.20E-45 CL0016 Tan PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan01g0499 K13416 - csv:101216389 745.347