Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan01g0510 ATGGCGGATGGTGAATTGGAGAGGGGCGAGACCAATTGTGGCCTTGCTTCCATGGATTCCATCGAATCGCGATGGGTATTTCAGGATGAGGACCAATCGGAGATCGACGACGACGACGAAGATGACGACGAGGCGAATGCAACGCGGCATCGTATGGATTTGGAATCTGACGAAGAAGATAATGTTGAGCAGAAATTGATTCGCACTGGCCCGCGGATTGATTCCTTCGATGTCGAAGCCCTTGAGGTCCCTGGTGCGCATAGAAATGAATACGAGGACTTCAACGTGTGGAAGAAAATCGCTCTCGCTTTTCAGACCCTTGGGGTTGTATTTGGTGATGTTGGGACAAGCCCTCTGTATACCTTCAGTGTCATGTTCAACAAAGTTCCTATTAATGGAGATGAAGATGTTATTGGGGCATTATCTCTAGTTATCTACACCTTAATCTTGATTTCACTAGTCAAGTATGTTTTTGTTGTTCTTCTGGCAAATGATGATGGCGAAGGTGGTACTTTTGCTTTGTACTCTTTGATTTGTAGACATGCCAAGGTCAGTCTTCTCCCGAATCAACTTCCCTCTGATACCCGAATATCGAGTTTTAGGTTAAAGGTGCCATCGGCTGAGTTGGAAAGATCACTAAAAATAAAGGAAAAACTTGAGACTTCCCTGACTTTAAAGAAGCTTCTTTTGATGCTCGTTCTTGCTGGAACTTCTATGGTAATAGCTGATGGAGTTGTTACACCAGCAATGTCAGTAATGTCAGCTGTTGGTGGACTAAAGATTGCAGTGGATGCAATCAACCAAGATGAGGCTGTGATGATCTCAGTTGCCTGTCTTATAGTTTTGTTCAGTGTTCAGAAGTATGGCACTAGCAAAGTGGGACTCGCTGTTGGTCCTGCATTATTCATATGGTTTTGTACACTTGCAGGCCTTGGGATTTATAACCTTGTCATATATGATAGCAGTGTCTTGAAGGCATTCAATCCCGTTCATATTTATTATTTCTTCAAAAGGAACTCTACCAATGCATGGTATTGCCTTGGAGGTTGTCTTTTATGTGCTACAGGTTCCGAGGCAATGTTTGCAGATCTTTGCTATTTCTCTGTGCGGTCAATACAGCTTACGTTTGTGTTTCTCGTCTTGCCTTGTCTTTTCTTGGGTTATTTGGGTCAAGCTGCCTACCTTATATCAAACCATAATGGAGCTGAGCACGTTTTTTATAATTCTGTTCCCAAAAGTGCCTTCTGGCCAGTTTTTCTCATTGCTAATGTTGCTGCATTAATTGCCAGTCGGGCAATGACTACAGCTACCTTTTCATGTATAAAACAATCAACAGCACTTGGTTGTTTTCCTCGTCTTAAGATCATTCATACATCTAGGAAATTCATGGGGCAGATCTATATCCCGGTGTTGAATTGGTTTTTGTTGGCAGTTTGCCTGGTGGTCGTCTGCTCCATATCTAGCATGTATGAGATTGGAAACGCATATGGTGTCGCTGAGCTGGGAGTGATGATGATGACAACTGTCTTGGTAACCATTGTTATGCTTCTTATATGGCAGATAAATATTATCATCGTGATGGGTTTTGCGTTGATCTTTCTTGGGATAGAAATGATATTTTTCTCATCTGTGTTATGGGGTGTGGGTGATGGAAGTTGGATCATATTGGTCTTCGCAGTGATTATGTTCTTCATTATGTATATCTGGAACTACGGAAGCAAGCTCAAGTATGAAACTGAAGTCAAGCAAAAGCTGTCAATGGATTTAATGCGGGAACTTGGGTGCAATCTCGGGACAATCAGAGCTCCTGGCATCGGTTTGCTCTATAATGAACTAGTGAAAGGAATACCTGCAATATTTGGCCATTTTCTGACTACTCTTCCTGCAGTTCATTCAATGATCATATTTGTCTGTATCAAGTACGTGCCAGTTCCTGTTGTGCCTCAGAGTGAGAGATTTCTTTTCCGCCGAGTCTGCCCAAAGAGCTATCACATCTTTCGTTGCATTGCCAGGTATGGTTACAAGGATGTCCGAAAAGAAAATCATCAGACATTTGAGCAGCTCTTAATTGAAAGTCTTGAGAAATTCATCCGTCGAGAAGCCCAAGAAAGGTCATTAGAGAGTGATGGAGATGACGATACTGATTCCGACGAGATCCACGGCTCACGACTTCTCATAGCTCCCAATGGAAGTGTCTATTCACTTGGCATTCCTCTCCTTGCTGAATTCAACGAGATTAGACCCATAACTGAAATCATCAACGTACCAGAAGAGGTGCAGCCAGTAGAATCTCCAGACCCCTCAATCCCAGATGCAGAGCAATCACTTGAGAGAGAGCTTTCCTTTATACGAAAGGCTAAAGAATCGGGAGTAGTCTACCTTCTTGGTCATGGAGACATTAGAGCAAGAAAGGACTCTTGGTTTATCAAGAAGCTAGTGATCAATTACTTCTATGCGTTTTTAAGAAAGAACAGCAGGAGGGGTATTGCCAACTTGAGTGTTCCCCACACCCACCTGATGCAGGTTGGCATGACATACATGGTTTAG 2547 42.95 MADGELERGETNCGLASMDSIESRWVFQDEDQSEIDDDDEDDDEANATRHRMDLESDEEDNVEQKLIRTGPRIDSFDVEALEVPGAHRNEYEDFNVWKKIALAFQTLGVVFGDVGTSPLYTFSVMFNKVPINGDEDVIGALSLVIYTLILISLVKYVFVVLLANDDGEGGTFALYSLICRHAKVSLLPNQLPSDTRISSFRLKVPSAELERSLKIKEKLETSLTLKKLLLMLVLAGTSMVIADGVVTPAMSVMSAVGGLKIAVDAINQDEAVMISVACLIVLFSVQKYGTSKVGLAVGPALFIWFCTLAGLGIYNLVIYDSSVLKAFNPVHIYYFFKRNSTNAWYCLGGCLLCATGSEAMFADLCYFSVRSIQLTFVFLVLPCLFLGYLGQAAYLISNHNGAEHVFYNSVPKSAFWPVFLIANVAALIASRAMTTATFSCIKQSTALGCFPRLKIIHTSRKFMGQIYIPVLNWFLLAVCLVVVCSISSMYEIGNAYGVAELGVMMMTTVLVTIVMLLIWQINIIIVMGFALIFLGIEMIFFSSVLWGVGDGSWIILVFAVIMFFIMYIWNYGSKLKYETEVKQKLSMDLMRELGCNLGTIRAPGIGLLYNELVKGIPAIFGHFLTTLPAVHSMIIFVCIKYVPVPVVPQSERFLFRRVCPKSYHIFRCIARYGYKDVRKENHQTFEQLLIESLEKFIRREAQERSLESDGDDDTDSDEIHGSRLLIAPNGSVYSLGIPLLAEFNEIRPITEIINVPEEVQPVESPDPSIPDAEQSLERELSFIRKAKESGVVYLLGHGDIRARKDSWFIKKLVINYFYAFLRKNSRRGIANLSVPHTHLMQVGMTYMV 848
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 4666864 4686680 - Tan0021189.1 Tan01g0510 737934
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan01g0510 848 MobiDBLite consensus disorder prediction 44 62 - -
Tan01g0510 848 PANTHER OSMOTIC STRESS POTASSIUM TRANSPORTER 86 848 IPR003855 GO:0000325(PANTHER)|GO:0005774(PANTHER)|GO:0006813(PANTHER)|GO:0015079(InterPro)|GO:0015079(PANTHER)|GO:0016020(PANTHER)|GO:0016020(InterPro)|GO:0071805(InterPro)
Tan01g0510 848 MobiDBLite consensus disorder prediction 27 62 - -
Tan01g0510 848 Pfam K+ potassium transporter C-terminal domain 603 846 IPR053952 -
Tan01g0510 848 NCBIfam potassium uptake protein 102 848 IPR003855 GO:0015079(InterPro)|GO:0016020(InterPro)|GO:0071805(InterPro)
Tan01g0510 848 Pfam K+ potassium transporter integral membrane domain 102 588 IPR053951 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan01g0510 Tan-Chr1:4666864 Tan11g0002 Tan-Chr11:14632 1.80E-257 dispersed
Tan01g0510 Tan-Chr1:4666864 Tan07g1332 Tan-Chr7:62505389 2.10E-165 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan01g0510 - - - 0.0