Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Tan01g0574 | ATGGCCACCGGTGTGCTGCTCCGTTCTCTTCGACGTCGCGATTTAGCCTCCTCCTCTATTTCAGCTTACCGATCCTTAACAAGCAATGCCAAGCCATCGTGGGCCAAGTCTCAGCTTAGCCAATCGTGGGCAAGTTTGTCCAGGCCATTCAGTTCAAAGCCTGCTGGGAATGATGTAATTGGTATTGACTTGGGTACCACCAATTCTTGTGTTTCTGTCATGGAGGGAAAGAATCCGAAAGTTATTGAAAACTCTGAAGGTGCCAGGACCACACCATCGGTGGTTGCTTTCAATCAGAAAGGTGAACTACTCGTTGGAACACCAGCAAAGAGACAGGCAGTGACTAATCCAACAAATACTGTGTTTGGAACCAAACGTCTGATTGGTAGGCGCTTTGATGACCCTCAGACACAGAAGGAAATGAAGATGGTACCATACAAAATAGTCAGAGCTCCAAATGGAGATGCTTGGGTTGAAGCAAATGGACAGCAGTACTCACCGAGTCAGATTGGTGCTTTTGTTCTAACAAAGATGAAGGAAACTGCTGAAGCCTATCTTGGAAAGAGTGTGTCGAAGGCTGTGATTACTGTTCCAGCTTATTTCAACGATGCACAGAGACAGGCAACAAAGGATGCTGGCAGGATTGCTGGTTTGGATGTTCTTAGAATTATCAATGAGCCCACTGCTGCTGCACTTTCTTATGGAATGAATAATAAGGAAGGTCTTATTGCTGTCTTTGATCTTGGTGGTGGCACATTCGATGTTTCCATCCTGGAGATATCCAATGGTGTTTTTGAGGTGAAAGCAACAAATGGTGACACTTTCTTGGGAGGAGAGGATTTTGACAATGCTCTACTGGACTTCCTAGTTAGTGAGTTCAAACGAACTGAGGGAATTGACCTTACCAAGGACAGGCTTGCGTTGCAGAGGCTTAGGGAGGCTGCGGAAAAGGCAAAGATTGAACTGTCATCTACATCCCAGACTGAAATTAACCTGCCATTTATCACTGCTGATGCAACTGGTGCAAAGCATCTGAACATCACTTTGACCAGGTCAAAGTTTGAAAGCCTAGTTAATCACCTGATTGAAAGGACCAAGGCCCCATGCAAAAATTGTTTGAAGGACGCCAATATTTCTATCAAAGAAGTGGATGAAGTGCTTTTAGTTGGTGGAATGACCCGTGTACCTAAGGTGCAAGACGTTGTTACAGAAATTTTTGGAAAGAGCCCCAGCAAAGGTGTGAATCCTGATGAAGCAGTTGCTATGGGAGCTGCAATTCAGGGTGGCATTCTTCGTGGCGATGTCAAAGAATTGCTTCTTTTAGATGTCACCCCTCTATCTCTTGGTATTGAGACACTTGGTGGTATCTTTACAAGGTTGATCAGTAGGAACACTACCATTCCAACTAAGAAGAGCCAGGTGTTCTCAACAGCAGCTGACAATCAGACCCAGGTCGGTATTAAGGTACTGCAAGGCGAGAGAGAAATGGCATCTGACAACAAGCTTTTAGGGGAGTTTGAGTTAGTTGGAATTCCTCCTGCCCCGAGAGGAATGCCTCAAATTGAGGTGACGTTTGACATTGATGCCAATGGTATTGTTACCGTCTCAGCCAAGGACAAGTCCACTGGCAAAGAACAACAAATCACCATTCGATCTTCTGGTGGACTTTCAGAGGACGAAATTGAAAAAATGGTCAAGGAAGCTGAGTTGCACGCCCAGAAGGATCAAGAGAGGAAATCTCTTATTGACATCAGAAACAGTGCAGATACCACCATCTACAGCATCGAGAAGAGCTTGGGCGAATACAGGGAGAAAATACCCAGCGAGGTAGCTAAGGAAATTGAGGATGCAGTGGCAGACTTAAGGAACGCAATGTCAGGAGATGACGTTGAAGAGATCAAGTCAAAGCTCGATGCTGCCAACAAAGCTGTTTCCAAGATTGGGCAACATATGGCTGGTGGTTCAGGTGGTGGTGCTGCTTCTGGAGGATCTCAGGGCGGCGAACAAGCTTCTGAAGCCGAGTACGAAGAGGTTAAGAAATAA | 2043 | 45.67 | MATGVLLRSLRRRDLASSSISAYRSLTSNAKPSWAKSQLSQSWASLSRPFSSKPAGNDVIGIDLGTTNSCVSVMEGKNPKVIENSEGARTTPSVVAFNQKGELLVGTPAKRQAVTNPTNTVFGTKRLIGRRFDDPQTQKEMKMVPYKIVRAPNGDAWVEANGQQYSPSQIGAFVLTKMKETAEAYLGKSVSKAVITVPAYFNDAQRQATKDAGRIAGLDVLRIINEPTAAALSYGMNNKEGLIAVFDLGGGTFDVSILEISNGVFEVKATNGDTFLGGEDFDNALLDFLVSEFKRTEGIDLTKDRLALQRLREAAEKAKIELSSTSQTEINLPFITADATGAKHLNITLTRSKFESLVNHLIERTKAPCKNCLKDANISIKEVDEVLLVGGMTRVPKVQDVVTEIFGKSPSKGVNPDEAVAMGAAIQGGILRGDVKELLLLDVTPLSLGIETLGGIFTRLISRNTTIPTKKSQVFSTAADNQTQVGIKVLQGEREMASDNKLLGEFELVGIPPAPRGMPQIEVTFDIDANGIVTVSAKDKSTGKEQQITIRSSGGLSEDEIEKMVKEAELHAQKDQERKSLIDIRNSADTTIYSIEKSLGEYREKIPSEVAKEIEDAVADLRNAMSGDDVEEIKSKLDAANKAVSKIGQHMAGGSGGGAASGGSQGGEQASEAEYEEVKK | 680 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
1 | 5346630 | 5350289 | + | Tan0016797.1 | Tan01g0574 | 737998 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Tan01g0574 | 680 | MobiDBLite | consensus disorder prediction | 648 | 680 | - | - | |
Tan01g0574 | 680 | ProSitePatterns | Heat shock hsp70 proteins family signature 2. | 245 | 258 | IPR018181 | - | |
Tan01g0574 | 680 | PANTHER | HEAT SHOCK PROTEIN 70KDA | 59 | 614 | IPR013126 | GO:0005524(InterPro)|GO:0005737(PANTHER)|GO:0005739(PANTHER)|GO:0140662(InterPro) | |
Tan01g0574 | 680 | PRINTS | 70kDa heat shock protein signature | 414 | 434 | - | - | |
Tan01g0574 | 680 | PRINTS | 70kDa heat shock protein signature | 383 | 399 | - | - | |
Tan01g0574 | 680 | PRINTS | 70kDa heat shock protein signature | 251 | 261 | - | - | |
Tan01g0574 | 680 | PRINTS | 70kDa heat shock protein signature | 109 | 117 | - | - | |
Tan01g0574 | 680 | PRINTS | 70kDa heat shock protein signature | 193 | 213 | - | - | |
Tan01g0574 | 680 | PRINTS | 70kDa heat shock protein signature | 86 | 98 | - | - | |
Tan01g0574 | 680 | PRINTS | 70kDa heat shock protein signature | 437 | 456 | - | - | |
Tan01g0574 | 680 | PRINTS | 70kDa heat shock protein signature | 58 | 71 | - | - | |
Tan01g0574 | 680 | PRINTS | 70kDa heat shock protein signature | 518 | 534 | - | - | |
Tan01g0574 | 680 | Gene3D | Actin; Chain A, domain 4 | 278 | 365 | - | - | |
Tan01g0574 | 680 | ProSitePatterns | Heat shock hsp70 proteins family signature 1. | 62 | 69 | IPR018181 | - | |
Tan01g0574 | 680 | Gene3D | - | 556 | 653 | IPR029048 | - | |
Tan01g0574 | 680 | Hamap | Chaperone protein DnaK [dnaK]. | 56 | 678 | IPR012725 | GO:0005524(InterPro)|GO:0006457(InterPro)|GO:0051082(InterPro) | |
Tan01g0574 | 680 | Gene3D | Substrate Binding Domain Of DNAk; Chain A, domain 1 | 431 | 555 | IPR029047 | - | |
Tan01g0574 | 680 | Pfam | Hsp70 protein | 59 | 651 | IPR013126 | GO:0005524(InterPro)|GO:0140662(InterPro) | |
Tan01g0574 | 680 | FunFam | Chaperone protein DnaK HSP70 | 427 | 610 | - | - | |
Tan01g0574 | 680 | CDD | HSPA9-like_NBD | 56 | 431 | - | - | |
Tan01g0574 | 680 | FunFam | Chaperone protein HscA homolog | 242 | 299 | - | - | |
Tan01g0574 | 680 | FunFam | Heat shock protein 9 | 122 | 173 | - | - | |
Tan01g0574 | 680 | FunFam | Molecular chaperone DnaK | 60 | 241 | - | - | |
Tan01g0574 | 680 | SUPERFAMILY | Actin-like ATPase domain | 240 | 431 | IPR043129 | - | |
Tan01g0574 | 680 | ProSitePatterns | Heat shock hsp70 proteins family signature 3. | 386 | 400 | IPR018181 | - | |
Tan01g0574 | 680 | SUPERFAMILY | Heat shock protein 70kD (HSP70), C-terminal subdomain | 556 | 655 | IPR029048 | - | |
Tan01g0574 | 680 | Gene3D | - | 60 | 428 | - | - | |
Tan01g0574 | 680 | FunFam | Molecular chaperone DnaK | 556 | 655 | - | - | |
Tan01g0574 | 680 | NCBIfam | molecular chaperone DnaK | 59 | 651 | IPR012725 | GO:0005524(InterPro)|GO:0006457(InterPro)|GO:0051082(InterPro) | |
Tan01g0574 | 680 | SUPERFAMILY | Heat shock protein 70kD (HSP70), peptide-binding domain | 433 | 589 | IPR029047 | - | |
Tan01g0574 | 680 | Gene3D | - | 235 | 415 | - | - | |
Tan01g0574 | 680 | Coils | Coil | 301 | 328 | - | - | |
Tan01g0574 | 680 | FunFam | Molecular chaperone DnaK | 278 | 365 | - | - | |
Tan01g0574 | 680 | SUPERFAMILY | Actin-like ATPase domain | 59 | 239 | IPR043129 | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Tan01g0574 | Tan-Chr1:5346630 | Tan11g2058 | Tan-Chr11:43849648 | 4.70E-192 | dispersed | |
Tan01g0574 | Tan-Chr1:5346630 | Tan11g0741 | Tan-Chr11:6314563 | 5.40E-156 | transposed |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Tan01g0574 | K04043 | - | csv:101216102 | 1236.48 |