Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan01g0594 ATGTGGACTCAAAAGTCTGATCTCATGGCCATTTTCTTGGTGACTTTCATGTTCGTCCTCGGCCTAACGCATGCTCAAAACTCTCCTCAAGACTACCTTGCATTACACAACCGCGCTCGAGCGGAGGTTGGCGTCGGTCCCATGAAATGGGATAACAGGATCGCTGCCTACGCTCAAGCCTATGCCAACCAAAGGAGGAATGACTGTGCCATGGTTCACTCAACCGGGCCATACGGCGAAAACATAGCTGCAGGCTTCTACCCCGAGTTCACCGGGGTCGACGCAGTGAAGCTGTGGGTCGACGAGAAGCCTCATTACAACTATGCGTCGAACAAATGCGTCGGGGGCCAGTGTGGACACTATACTCAAGTTGTGTGGCGCACCTCGGTCCGTCTTGGATGTGCTAGAGTACCCTGTAAGGGTAATTCTCAATTTGTTGTATGCAACTATGATCCTCCTGGCAACTATATAGGAGAGAGACCTTATGATTCTTCCCTCTAA 501 51.1 MWTQKSDLMAIFLVTFMFVLGLTHAQNSPQDYLALHNRARAEVGVGPMKWDNRIAAYAQAYANQRRNDCAMVHSTGPYGENIAAGFYPEFTGVDAVKLWVDEKPHYNYASNKCVGGQCGHYTQVVWRTSVRLGCARVPCKGNSQFVVCNYDPPGNYIGERPYDSSL 166
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 5463869 5464369 + Tan0022256.1 Tan01g0594 738018

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Tan01g0594 166 ProSitePatterns CRISP family signature 2. 145 156 IPR018244 GO:0005576(InterPro)
Tan01g0594 166 CDD CAP_PR-1 29 162 - -
Tan01g0594 166 ProSitePatterns CRISP family signature 1. 119 129 IPR018244 GO:0005576(InterPro)
Tan01g0594 166 SUPERFAMILY PR-1-like 15 163 IPR035940 -
Tan01g0594 166 SMART SCP_3 27 158 IPR014044 -
Tan01g0594 166 PANTHER CYSTEINE-RICH SECRETORY PROTEIN-RELATED 30 158 IPR001283 GO:0005615(PANTHER)
Tan01g0594 166 FunFam Putative pathogenesis-related protein 1 26 162 - -
Tan01g0594 166 PRINTS Venom allergen 5 signature 117 136 IPR002413 -
Tan01g0594 166 PRINTS Venom allergen 5 signature 93 108 IPR002413 -
Tan01g0594 166 PRINTS Venom allergen 5 signature 48 66 IPR002413 -
Tan01g0594 166 Gene3D CAP 22 166 IPR035940 -
Tan01g0594 166 PRINTS Allergen V5/Tpx-1 family signature 95 108 IPR001283 -
Tan01g0594 166 PRINTS Allergen V5/Tpx-1 family signature 118 134 IPR001283 -
Tan01g0594 166 PRINTS Allergen V5/Tpx-1 family signature 48 66 IPR001283 -
Tan01g0594 166 PRINTS Allergen V5/Tpx-1 family signature 145 158 IPR001283 -
Tan01g0594 166 Pfam Cysteine-rich secretory protein family 33 150 IPR014044 -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan01g0594 K13449 - - csv:105436021 277.33
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan01g0594 Tan-Chr1:5463869 Tan02g1065 Tan-Chr2:17249512 9.80E-51 dispersed
Tan03g1023 Tan-Chr3:66589866 Tan01g0594 Tan-Chr1:5463869 5.00E-34 transposed
Tan08g1958 Tan-Chr8:71693775 Tan01g0594 Tan-Chr1:5463869 4.30E-36 transposed
Tan01g0594 Tan-Chr1:5463869 Tan02g1048 Tan-Chr2:16207874 1.30E-47 wgd
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi3g802 . . Bda06g01145 . . . . . Cmo19g00540 . . . . . . Cpe04g00339 Cpe15g00419 . . . . . . . Cla02g00713 Cam02g0763 Cec02g0761 Cco02g0787 Clacu02g0754 Cmu02g0748 Cre02g1065 . . . . Lsi03g00627 Csa07g00657 . Cme01g00145 . . . . . . . . Sed07g1155 . . Cma11g01688 . . . . . Bhi11g01091 Tan01g0594 Cmetu07g1308 . . . . . . . . . . . Lsi03g00997 . Chy01g00154 .
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0001430 0 2 0 0 0 2 0 1 1 3 2 2 18 1 1 16 2 0 9 2 2 0 1 1 2 2 0 2 1 0 73