Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Tan01g0640 | ATGGAACCTATAGGAGCCATTTCAGAAAGAGAATGGATCTCTCTCAGTGGAACATATACAGCTGAGGAATCTGATTTCATGGCTAATTTGCTCAATAATTATTGTCTTCCAAATGAGCTAAATTCAGATTTGAGCTTGGAAATCCCATCTGCTTATTGGGCTGCAGCCAATGAACCACCATCATTGACCATGGCAGCCATGGATGAACCTTCTTATTATTCTTCAGATGCTTCTGATTCTTCCAATTTGTATGGCCTTCCACAAGGCAACAACAACAACCATCATTACACCTTGAGTGATTCCCACCCTCTTTGGTTGCCCAATGGTACCTCTTTGTCCTTGGATTTCTCCATGGAGGATGTCGGGAAAGCCGACTCCGCTCGCTTTGACGACAACGGTTCGAGTCGAAAAACAAGGCAATGCAGGCTGCAACAATCCCCTGCTGACCCTGTTGCTGTAGCTGTTGTCGATGGGAAAAGCTCACAACTTAAAAGGAAACCCGAGGTGACAGCGGAGGAAGAAGCTATGGGAGACGAGAAAGTTTCACCGATGTCGGTCGACGAAAACTCAAAGAAGCGATCCCACAGTTCGCTTGATGTCGAAAAGTCGAAGAGGAGCACGAAGACACGGAAGATCCCAAAGCTTGCTTTGCCTAGCTGCAATGAAGAGGATCACATTATTAGTCCAAATGGGCAGTGCACAAGCAGTTTCAGCTCTGAGGATGACTGTAATGAGGCTCAAGAAATCAATGGTGGAATCACTTCAAGCTCAAACTCAAAAGGGTCTGCAACTTTGACCTCAAATGGAAAGCCAAGAGCCAGTAGAGGTTCAGCCACAGACCCTCAAAGCCTTTATGCAAGGAAAAGAAGAGAAAGAATCAATGAAAGGTTGAGAATCTTACAAAGCCTCGTCCCGAATGGTACAAAGGTTGATATCAGTACAATGCTTGAAGAAGCTGTTCAATATGTGAAGTTTTTGCAGCTTCAAATCAAGTTGTTGAGTTCTGATGATCTATGGATGTATGCACCAATTGCTTACAATGGAATGGACATTGGACTTAACTTGAAGCTCATGAAGCAAGACAATGCATCACAATAG | 1098 | 44.17 | MEPIGAISEREWISLSGTYTAEESDFMANLLNNYCLPNELNSDLSLEIPSAYWAAANEPPSLTMAAMDEPSYYSSDASDSSNLYGLPQGNNNNHHYTLSDSHPLWLPNGTSLSLDFSMEDVGKADSARFDDNGSSRKTRQCRLQQSPADPVAVAVVDGKSSQLKRKPEVTAEEEAMGDEKVSPMSVDENSKKRSHSSLDVEKSKRSTKTRKIPKLALPSCNEEDHIISPNGQCTSSFSSEDDCNEAQEINGGITSSSNSKGSATLTSNGKPRASRGSATDPQSLYARKRRERINERLRILQSLVPNGTKVDISTMLEEAVQYVKFLQLQIKLLSSDDLWMYAPIAYNGMDIGLNLKLMKQDNASQ | 365 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
1 | 6143738 | 6145240 | - | Tan0019658.1 | Tan01g0640 | 738064 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Tan01g0640 | 365 | ProSiteProfiles | Myc-type, basic helix-loop-helix (bHLH) domain profile. | 277 | 326 | IPR011598 | GO:0046983(InterPro) | |
Tan01g0640 | 365 | MobiDBLite | consensus disorder prediction | 225 | 281 | - | - | |
Tan01g0640 | 365 | MobiDBLite | consensus disorder prediction | 161 | 206 | - | - | |
Tan01g0640 | 365 | CDD | bHLH_AtIND_like | 278 | 340 | - | - | |
Tan01g0640 | 365 | Pfam | Helix-loop-helix DNA-binding domain | 287 | 327 | IPR011598 | GO:0046983(InterPro) | |
Tan01g0640 | 365 | Gene3D | - | 279 | 335 | IPR036638 | GO:0046983(InterPro) | |
Tan01g0640 | 365 | PANTHER | TRANSCRIPTION FACTOR BHLH83-RELATED | 75 | 349 | IPR045843 | GO:0000978(PANTHER)|GO:0000981(PANTHER)|GO:0003700(InterPro)|GO:0005634(PANTHER)|GO:0006355(InterPro)|GO:0006357(PANTHER) | |
Tan01g0640 | 365 | MobiDBLite | consensus disorder prediction | 126 | 287 | - | - | |
Tan01g0640 | 365 | SMART | finulus | 283 | 332 | IPR011598 | GO:0046983(InterPro) | |
Tan01g0640 | 365 | FunFam | Basic helix-loop-helix transcription factor | 278 | 335 | - | - | |
Tan01g0640 | 365 | SUPERFAMILY | HLH, helix-loop-helix DNA-binding domain | 277 | 342 | IPR036638 | GO:0046983(InterPro) |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Tan01g0640 | Tan-Chr1:6143738 | Tan11g1396 | Tan-Chr11:12413439 | 2.80E-18 | dispersed | |
Tan01g0640 | Tan-Chr1:6143738 | Tan01g4705 | Tan-Chr1:112934162 | 1.20E-37 | wgd | |
Tan01g0640 | Tan-Chr1:6143738 | Tan02g1741 | Tan-Chr2:81174060 | 9.30E-38 | wgd | |
Tan01g0640 | Tan-Chr1:6143738 | Tan02g1022 | Tan-Chr2:14677850 | 2.90E-47 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
26290 | PF00010 | HLH | 7.80E-09 | No_clan | Tan | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Tan01g0640 | - | - | - | 0.0 |