Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan01g0671 ATGGGGAGTATTGAAGCAGATAGAACTGTAACAGGGTTCGCCGCCAAAGACCCATCTGGGTTTCTCGCTCCCTACACTTATACTCTCAGAAACACCGGCCCCGAAGATGTTTTCATCAAAGTCATTTGCTGTGGAGTCTGCCACTCTGATCTTCACCAAATCAAAAATGACCTCGACATGTCCAATTACCCCATGGTTCCTGGACACGAGGTGGTCGGAGAAGTGGTGGAGGTTGGATCGGAAGTTGATCGGTTCAAAACAGGGGAGTTGGTCGGAGTTGGGTGTATTGTTGGATCCTGTTCGAGTTGCAGTCCTTGCAATTCCGATAAGGAGCAGTACTGTAACAGAAGAATCTGGAGTTATAACGATGTGTATCACGACGGCCGCCCCACCCAAGGCGGGTTCTCCTCCGCCATGGTCGTTCACCAAAAGTTTGTTGTGAAAATCCCGGAAGGAATGTCGCCGGAGCAGGCGGCGCCGCTACTGTGCGCCGGAGTGACGGTGTACAGCCCGCTGAGCCACTTCGGGCTGAAACAGAGCGGGCTTAGAGGCGGAATTTTGGGGCTGGGCGGCGTGGGGCATATGGGTGTGAAAGTGGCGAAGGCTTTGGGTCACCACGTGACGGTGATAAGCTCGTCGGAGAAGAAGAGGGAAGAGGCTCTGGAGCATCTCGGCGCCGACGAGTACTTGGTCAGCTCCGACAATACTCAAATGGAACGAGCCATTGACTCGCTCGATTACATAATCGACACAGTCCCTGTTTTTCATCCTCTCGAGCCGTATCTCTCTCTTCTCAAACTCGACGGAAAATTGATCTTGATGGGCGTTATTAATACCCCATTGCAATTCGTTTCCCCTCTCCTTATGCTCGGGAGGAAAACAATTACAGGGAGCTTCATCGGAAGCATGACTGAGACGCAAGAAGTGTTGGATTTCTTCAAAGAGAAGGAGCTGAGCTCCATGATTGAAGTGATAAAGCTCGATTACATAAACAAGGCCTTCGAGAGGTTGGAGAAGAATGACGTCAGATACAGGTTCGTCGTCGATGTCGCCGGAAGTAAGTTGCCATCAGTGAAACTGATCGGCGTCGGAGAATTTCAAGAGAGAAGACCACGGGTTTGTTATGTACTTTGGGTGGTCGGGGAAATGATAAATGCTCTGTACTATGAACTTGGAGGAACATGTTTGATTAACGGTTTGTTTGTTGTTGTTTTTTTTTTGTAA 1224 49.75 MGSIEADRTVTGFAAKDPSGFLAPYTYTLRNTGPEDVFIKVICCGVCHSDLHQIKNDLDMSNYPMVPGHEVVGEVVEVGSEVDRFKTGELVGVGCIVGSCSSCSPCNSDKEQYCNRRIWSYNDVYHDGRPTQGGFSSAMVVHQKFVVKIPEGMSPEQAAPLLCAGVTVYSPLSHFGLKQSGLRGGILGLGGVGHMGVKVAKALGHHVTVISSSEKKREEALEHLGADEYLVSSDNTQMERAIDSLDYIIDTVPVFHPLEPYLSLLKLDGKLILMGVINTPLQFVSPLLMLGRKTITGSFIGSMTETQEVLDFFKEKELSSMIEVIKLDYINKAFERLEKNDVRYRFVVDVAGSKLPSVKLIGVGEFQERRPRVCYVLWVVGEMINALYYELGGTCLINGLFVVVFFL 407
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 6387611 6389739 + Tan0017518.1 Tan01g0671 738095
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan01g0671 407 Gene3D - 13 350 - -
Tan01g0671 407 Pfam Alcohol dehydrogenase GroES-like domain 33 151 IPR013154 -
Tan01g0671 407 SMART PKS_ER_names_mod 20 348 IPR020843 GO:0016491(InterPro)
Tan01g0671 407 FunFam probable cinnamyl alcohol dehydrogenase 13 170 - -
Tan01g0671 407 PANTHER ALDEHYDE REDUCTASE 9 352 IPR047109 GO:0009809(PANTHER)|GO:0016616(PANTHER)|GO:0016616(InterPro)|GO:0045551(PANTHER)
Tan01g0671 407 ProSitePatterns Zinc-containing alcohol dehydrogenases signature. 68 82 IPR002328 GO:0008270(InterPro)|GO:0016491(InterPro)
Tan01g0671 407 FunFam Putative cinnamyl alcohol dehydrogenase 6 321 350 - -
Tan01g0671 407 Gene3D - 164 320 - -
Tan01g0671 407 CDD CAD1 11 349 IPR047109 GO:0016616(InterPro)
Tan01g0671 407 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 153 318 IPR036291 -
Tan01g0671 407 FunFam Cinnamyl alcohol dehydrogenase 164 320 - -
Tan01g0671 407 SUPERFAMILY GroES-like 17 181 IPR011032 -
Tan01g0671 407 Pfam Zinc-binding dehydrogenase 191 314 IPR013149 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan01g0671 Tan-Chr1:6387611 Tan02g0965 Tan-Chr2:12144033 2.60E-137 dispersed
Tan03g1765 Tan-Chr3:73478123 Tan01g0671 Tan-Chr1:6387611 1.00E-105 transposed
Tan07g0163 Tan-Chr7:4056999 Tan01g0671 Tan-Chr1:6387611 3.10E-86 transposed
Tan01g0671 Tan-Chr1:6387611 Tan02g0964 Tan-Chr2:12144033 1.40E-170 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan01g0671 K00083 - csv:101222395 619.002