Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Tan01g0671 | ATGGGGAGTATTGAAGCAGATAGAACTGTAACAGGGTTCGCCGCCAAAGACCCATCTGGGTTTCTCGCTCCCTACACTTATACTCTCAGAAACACCGGCCCCGAAGATGTTTTCATCAAAGTCATTTGCTGTGGAGTCTGCCACTCTGATCTTCACCAAATCAAAAATGACCTCGACATGTCCAATTACCCCATGGTTCCTGGACACGAGGTGGTCGGAGAAGTGGTGGAGGTTGGATCGGAAGTTGATCGGTTCAAAACAGGGGAGTTGGTCGGAGTTGGGTGTATTGTTGGATCCTGTTCGAGTTGCAGTCCTTGCAATTCCGATAAGGAGCAGTACTGTAACAGAAGAATCTGGAGTTATAACGATGTGTATCACGACGGCCGCCCCACCCAAGGCGGGTTCTCCTCCGCCATGGTCGTTCACCAAAAGTTTGTTGTGAAAATCCCGGAAGGAATGTCGCCGGAGCAGGCGGCGCCGCTACTGTGCGCCGGAGTGACGGTGTACAGCCCGCTGAGCCACTTCGGGCTGAAACAGAGCGGGCTTAGAGGCGGAATTTTGGGGCTGGGCGGCGTGGGGCATATGGGTGTGAAAGTGGCGAAGGCTTTGGGTCACCACGTGACGGTGATAAGCTCGTCGGAGAAGAAGAGGGAAGAGGCTCTGGAGCATCTCGGCGCCGACGAGTACTTGGTCAGCTCCGACAATACTCAAATGGAACGAGCCATTGACTCGCTCGATTACATAATCGACACAGTCCCTGTTTTTCATCCTCTCGAGCCGTATCTCTCTCTTCTCAAACTCGACGGAAAATTGATCTTGATGGGCGTTATTAATACCCCATTGCAATTCGTTTCCCCTCTCCTTATGCTCGGGAGGAAAACAATTACAGGGAGCTTCATCGGAAGCATGACTGAGACGCAAGAAGTGTTGGATTTCTTCAAAGAGAAGGAGCTGAGCTCCATGATTGAAGTGATAAAGCTCGATTACATAAACAAGGCCTTCGAGAGGTTGGAGAAGAATGACGTCAGATACAGGTTCGTCGTCGATGTCGCCGGAAGTAAGTTGCCATCAGTGAAACTGATCGGCGTCGGAGAATTTCAAGAGAGAAGACCACGGGTTTGTTATGTACTTTGGGTGGTCGGGGAAATGATAAATGCTCTGTACTATGAACTTGGAGGAACATGTTTGATTAACGGTTTGTTTGTTGTTGTTTTTTTTTTGTAA | 1224 | 49.75 | MGSIEADRTVTGFAAKDPSGFLAPYTYTLRNTGPEDVFIKVICCGVCHSDLHQIKNDLDMSNYPMVPGHEVVGEVVEVGSEVDRFKTGELVGVGCIVGSCSSCSPCNSDKEQYCNRRIWSYNDVYHDGRPTQGGFSSAMVVHQKFVVKIPEGMSPEQAAPLLCAGVTVYSPLSHFGLKQSGLRGGILGLGGVGHMGVKVAKALGHHVTVISSSEKKREEALEHLGADEYLVSSDNTQMERAIDSLDYIIDTVPVFHPLEPYLSLLKLDGKLILMGVINTPLQFVSPLLMLGRKTITGSFIGSMTETQEVLDFFKEKELSSMIEVIKLDYINKAFERLEKNDVRYRFVVDVAGSKLPSVKLIGVGEFQERRPRVCYVLWVVGEMINALYYELGGTCLINGLFVVVFFL | 407 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
1 | 6387611 | 6389739 | + | Tan0017518.1 | Tan01g0671 | 738095 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Tan01g0671 | 407 | Gene3D | - | 13 | 350 | - | - | |
Tan01g0671 | 407 | Pfam | Alcohol dehydrogenase GroES-like domain | 33 | 151 | IPR013154 | - | |
Tan01g0671 | 407 | SMART | PKS_ER_names_mod | 20 | 348 | IPR020843 | GO:0016491(InterPro) | |
Tan01g0671 | 407 | FunFam | probable cinnamyl alcohol dehydrogenase | 13 | 170 | - | - | |
Tan01g0671 | 407 | PANTHER | ALDEHYDE REDUCTASE | 9 | 352 | IPR047109 | GO:0009809(PANTHER)|GO:0016616(PANTHER)|GO:0016616(InterPro)|GO:0045551(PANTHER) | |
Tan01g0671 | 407 | ProSitePatterns | Zinc-containing alcohol dehydrogenases signature. | 68 | 82 | IPR002328 | GO:0008270(InterPro)|GO:0016491(InterPro) | |
Tan01g0671 | 407 | FunFam | Putative cinnamyl alcohol dehydrogenase 6 | 321 | 350 | - | - | |
Tan01g0671 | 407 | Gene3D | - | 164 | 320 | - | - | |
Tan01g0671 | 407 | CDD | CAD1 | 11 | 349 | IPR047109 | GO:0016616(InterPro) | |
Tan01g0671 | 407 | SUPERFAMILY | NAD(P)-binding Rossmann-fold domains | 153 | 318 | IPR036291 | - | |
Tan01g0671 | 407 | FunFam | Cinnamyl alcohol dehydrogenase | 164 | 320 | - | - | |
Tan01g0671 | 407 | SUPERFAMILY | GroES-like | 17 | 181 | IPR011032 | - | |
Tan01g0671 | 407 | Pfam | Zinc-binding dehydrogenase | 191 | 314 | IPR013149 | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Tan01g0671 | Tan-Chr1:6387611 | Tan02g0965 | Tan-Chr2:12144033 | 2.60E-137 | dispersed | |
Tan03g1765 | Tan-Chr3:73478123 | Tan01g0671 | Tan-Chr1:6387611 | 1.00E-105 | transposed | |
Tan07g0163 | Tan-Chr7:4056999 | Tan01g0671 | Tan-Chr1:6387611 | 3.10E-86 | transposed | |
Tan01g0671 | Tan-Chr1:6387611 | Tan02g0964 | Tan-Chr2:12144033 | 1.40E-170 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Tan01g0671 | K00083 | - | csv:101222395 | 619.002 |