Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan01g0676 ATGAACTTCAAAACCAGATATCTCCCTTTCACTTTCTTCCTTCATCTTCTTCTTCATTTTCCATCTCTGGCTCTCAACACCGATGGAACCCTCTTGATTTCTCTCAAGCGATCCATTCTCCGAGATCCTTTGTCTGTTTTGGCTAATTGGAATTTCAACGATCAGACCCCCTGTTCTTGGCGTGGAGTCACCTGCACTGACCTTCAAACTTACGGCGGCGGCTGGCCGGATTTCCTTAGAGTCACTGCCCTGTCCCTCCCCGACCTCCAGCTTCTGGGTTCCATTCCTGATGAGCTTGGAAGGATTGAACACCTTCGTCTTCTCGATCTTTCTGGTAATTTCTTTAATGGGTCTTTGCCGATTTCCATTTTCAATGCTTTGGAACTTCAGATTCTTTCTCTTTCCAACAATGTCATCTCTGGTGAGTTGCCGGCGGATATTAGGGGTTTGAGGAGTCTTCAGGTTTTGAATCTGTCTGATAATGCGTTGGCCGGGAAAGTGCCGGGAAATCTCACTGTTCTGAAGAATCTTACTGTCCTTTCTCTGAGGAGTAATTACTTCACCGGAGAGATTCCCGGGAATTTCAGTTCAGTTGAGGTTTTGGATCTGTCGTCTAATTTGCTTAATGGGTCTCTGCCGGCGAATTTTGGTGGGGAGAAACTGAGGTATTTGAACTTCTCTTACAATAAAATTTCAAGTCCGATTCCGTTGGAGTTTGCCAAGAGGATTCCGGTGAATGCGACGATGGATCTCTCTTTCAACAATCTCACTGGAGCAATTCCTCAGTCGATTGCTCTGCTCAGCCAGAAAACAGAGGCGTTCACCGGAAATGAAGATCTCTGCGGGAAGCCATTGAAGCACCTCTGTTCGATTCCTTCTTCACTTACAACTCCCCCAAATGTTTCTGAAACTTCATCTTCTTCTCCGGCAATCGCCGCCATACCCAAAACAATCGGCTCCATTCCGGCGACACAGTCTCCTGTAGGTCCAAACGGGACACAAAATCCTCAGCCGCAAAACACCATGAAACCAATCACAATAGCCGCCATCGCCGTCGGTGACCTCGCCGGAGTCGCCATTCTCGCCGTCGTGATTCTCTACGTTTACCATCATCGGAAACGAAAACCCCCCAATTCCAAAACCCCTAAATCCGCCGAGAAGAAACCGCCGATTGGCTCAGAACAGAACCCCCAAACTAATCAGAAAAAACCCTCGTCGGTGTTGTTCTGTTTGGCGAACAAGGGTGAAGAGACGTCGGAGGCAACGAGTTCCTCCGACGGCGAAGAACAGAGAGACAAACCTGGCGCAACCCACGGCGGAGAGAACAAAGAGAGTAAGAAAAATGGCGTTCTCGTGACGGTGGACGGAGAAACAGAGCTCGAATTGGAGACTCTGTTAAAGGCATCGGCGTATATACTCGGAGCGAGTGGCGGAAGCATTGTGTACAAGGCAGTGCTGGAGGACGGAACGGCGTTCGCCGTCAGAAGGATCGGCGACGGCGGCGTTGAGAGATTGAGGGATTTTGAGGCCCAAGTGAGAGCCGTTGCAAAGCTTCGACATCAAAATTTGGTGAAAATTCGAGGGTTCTTTTGGGGAGAAGACGAGAAGCTCATCATCTACGACTATGTCTCCAATGGCTGCCTTGCTACCTCCATTCACAGAAAACCGAGTTCATCGTCTTCTTCCCAAAGCCAGCTATCATTCGAAGTCCGACTGAAAATCGCAAGAGGAATCGCCCGAGGACTGAGCTTCATCCACGAGAAGAAGCACGTCCATGGCAACCTCAAGCCTTCCAACATCCTTCTCAACGCCGAAATGGAGCCCTTAATCACCGATCTCGGCCTCGACAAGCTCCTCTCCAGCGGCTCCAAAATGGCGCTCGCCTCCGGTTCCGCCCGAAATTTCGGGAGCCACAGATCGACGCCGAATCGGGAGCACCAAGACGGCGGTGGTGGAGCAATTAGCAGCGGAAGCCCAGCCGTGAGCTTGGGATCGGCGTACCAGGCGCCGGAATCGCTGAAGAATGTGAAACCGAGCCCTAAATGGGATGTGTACTCGTTCGGGGTGATAATGCTGGAGATTTTAAGCGGGAGAATGGTGACGGAGAAGGAGGTGAATCAATGGAGCGGCGTTGAAGAAGAGGGACGGATGAAGAAGATGATCGATTTGGCGATTAGAGGGGAATTGGAAGGGAAAGAGGAGGCGATGATGGGGATTTTGAGATTAGGGTTTAACTGTGTTTGTTTTGTGCCTCAAAAGAGACCGACCATGAAAGAGGCGCTCCAATTACTTGACAGAATTGCTTCCACCATTTCTTCTTCACGCTAA 2328 50.09 MNFKTRYLPFTFFLHLLLHFPSLALNTDGTLLISLKRSILRDPLSVLANWNFNDQTPCSWRGVTCTDLQTYGGGWPDFLRVTALSLPDLQLLGSIPDELGRIEHLRLLDLSGNFFNGSLPISIFNALELQILSLSNNVISGELPADIRGLRSLQVLNLSDNALAGKVPGNLTVLKNLTVLSLRSNYFTGEIPGNFSSVEVLDLSSNLLNGSLPANFGGEKLRYLNFSYNKISSPIPLEFAKRIPVNATMDLSFNNLTGAIPQSIALLSQKTEAFTGNEDLCGKPLKHLCSIPSSLTTPPNVSETSSSSPAIAAIPKTIGSIPATQSPVGPNGTQNPQPQNTMKPITIAAIAVGDLAGVAILAVVILYVYHHRKRKPPNSKTPKSAEKKPPIGSEQNPQTNQKKPSSVLFCLANKGEETSEATSSSDGEEQRDKPGATHGGENKESKKNGVLVTVDGETELELETLLKASAYILGASGGSIVYKAVLEDGTAFAVRRIGDGGVERLRDFEAQVRAVAKLRHQNLVKIRGFFWGEDEKLIIYDYVSNGCLATSIHRKPSSSSSSQSQLSFEVRLKIARGIARGLSFIHEKKHVHGNLKPSNILLNAEMEPLITDLGLDKLLSSGSKMALASGSARNFGSHRSTPNREHQDGGGGAISSGSPAVSLGSAYQAPESLKNVKPSPKWDVYSFGVIMLEILSGRMVTEKEVNQWSGVEEEGRMKKMIDLAIRGELEGKEEAMMGILRLGFNCVCFVPQKRPTMKEALQLLDRIASTISSSR 775
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 6427168 6432903 + Tan0010185.1 Tan01g0676 738100
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan01g0676 775 MobiDBLite consensus disorder prediction 374 450 - -
Tan01g0676 775 Pfam Protein kinase domain 473 762 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Tan01g0676 775 Gene3D Ribonuclease Inhibitor 195 291 IPR032675 -
Tan01g0676 775 SUPERFAMILY Protein kinase-like (PK-like) 472 767 IPR011009 -
Tan01g0676 775 Gene3D Transferase(Phosphotransferase) domain 1 543 774 - -
Tan01g0676 775 Gene3D Phosphorylase Kinase; domain 1 436 542 - -
Tan01g0676 775 FunFam Probable leucine-rich repeat receptor-like protein kinase At2g33170 25 190 - -
Tan01g0676 775 MobiDBLite consensus disorder prediction 321 340 - -
Tan01g0676 775 Pfam Leucine Rich Repeat 198 217 IPR001611 GO:0005515(InterPro)
Tan01g0676 775 Pfam Leucine Rich Repeat 176 197 IPR001611 GO:0005515(InterPro)
Tan01g0676 775 Pfam Leucine Rich Repeat 220 240 IPR001611 GO:0005515(InterPro)
Tan01g0676 775 Gene3D Ribonuclease Inhibitor 25 194 IPR032675 -
Tan01g0676 775 ProSiteProfiles Leucine-rich repeat profile. 220 241 IPR001611 GO:0005515(InterPro)
Tan01g0676 775 MobiDBLite consensus disorder prediction 424 450 - -
Tan01g0676 775 Pfam Leucine rich repeat N-terminal domain 25 66 IPR013210 -
Tan01g0676 775 SUPERFAMILY L domain-like 28 287 - -
Tan01g0676 775 MobiDBLite consensus disorder prediction 391 407 - -
Tan01g0676 775 Pfam Leucine rich repeat 104 163 IPR001611 GO:0005515(InterPro)
Tan01g0676 775 MobiDBLite consensus disorder prediction 630 655 - -
Tan01g0676 775 ProSiteProfiles Protein kinase domain profile. 467 767 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Tan01g0676 775 FunFam Leucine-rich repeat receptor-like protein kinase 197 291 - -
Tan01g0676 775 PANTHER OS05G0588300 PROTEIN 174 769 IPR050994 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan01g0676 Tan-Chr1:6427168 Tan04g0814 Tan-Chr4:6926194 9.10E-75 dispersed
Tan04g2107 Tan-Chr4:76354713 Tan01g0676 Tan-Chr1:6427168 4.30E-14 dispersed
Tan01g0676 Tan-Chr1:6427168 Tan05g1568 Tan-Chr5:34985424 9.30E-136 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
66995 PF00069 Pkinase 1.30E-30 CL0016 Tan PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan01g0676 - - - 0.0