Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan01g0688 ATGGCCACCAATGACCAACAAAATCAGGTGGGAAGGCATCAAGAGGTTGGCCATAAGAGCCTTTTGCAAAGCGACGCTCTTTATCAGTATATTCTAGAGACAAGTGTATATCCAAGAGAGCCAGAAGCCATGAAGGAACTTAGAGACTTGACAGCCAAACATCCTTGGAATATAATGACAACATCAGCAGATGAAGGGCAATTCTTGAACATGCTCTTGAAGCTGATCAATGCCAAGAACACAATGGAGATTGGTGTCTATACTGGCTACTCCCTCCTCGCCACCGCCCTCGCCCTCCCCGACGATGGAAAGATACTGGCAATGGATATCAACAGAGAAAACTATGAAATTGGGCTTCCGGTGATCCAGAAGGCCGGCGTGGCCCATAAGATTGAATTCAAGGAAGGCCCAGCTCTCCCGACCCTCGACCAACTCGTTGCCGACGAGAAGAACCATGGAACATATGATTTTATATTTGTGGATGCTGATAAAGACAATTACATTAACTACCACAAGAGGTTGATTGATCTAGTGAAAGTTGGGGGAGTGATCGGCTACGACAACACTCTATGGAACGGTTCTGTCGTGGCACTACCTGATGCGCCAATGCGTAAGTATGTACGATATTACAGAGACTTTGTATTGGAGCTTAATAAGGCTCTTGCTTTGGACCCAAGGATTGAAATCTGCATGCTTCCCGTTGCTGATGGGATCACTCTTTGTCGTCGGATCAAGTGA 738 46.34 MATNDQQNQVGRHQEVGHKSLLQSDALYQYILETSVYPREPEAMKELRDLTAKHPWNIMTTSADEGQFLNMLLKLINAKNTMEIGVYTGYSLLATALALPDDGKILAMDINRENYEIGLPVIQKAGVAHKIEFKEGPALPTLDQLVADEKNHGTYDFIFVDADKDNYINYHKRLIDLVKVGGVIGYDNTLWNGSVVALPDAPMRKYVRYYRDFVLELNKALALDPRIEICMLPVADGITLCRRIK 245
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 6548836 6550676 - Tan0007132.1 Tan01g0688 738112
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan01g0688 245 CDD AdoMet_MTases 83 184 - -
Tan01g0688 245 FunFam Caffeoyl-CoA O-methyltransferase 1 13 245 - -
Tan01g0688 245 Pfam O-methyltransferase 33 244 IPR002935 GO:0008171(InterPro)
Tan01g0688 245 PANTHER O-METHYLTRANSFERASE-RELATED 17 244 IPR050362 GO:0008757(PANTHER)
Tan01g0688 245 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 24 243 IPR029063 -
Tan01g0688 245 Gene3D Vaccinia Virus protein VP39 19 245 IPR029063 -
Tan01g0688 245 ProSiteProfiles SAM-dependent O-methyltransferase class I-type profile. 20 244 IPR002935 GO:0008171(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan01g0688 Tan-Chr1:6548836 Tan03g1550 Tan-Chr3:71824513 3.80E-112 dispersed
Tan01g0688 Tan-Chr1:6548836 Tan02g0912 Tan-Chr2:10603751 2.40E-130 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan01g0688 K00588 - csv:101205648 458.373