Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan01g0696 ATGGGACTGTATGGTGTTCCTAGAAATGCCACTGTTTTCTGTGGGGTTGGAACAAAAATTCCAGTGAACTACGCTTGTAGAGGTCGAGAAACCATCAACCAGATGCTGGAATCTCCAAAATTCACAAATGTCAGTGAAAATTGCAAATTGCCGCTCTCGGAAGATAGTGTTTGCAGGAAGTGTATCAATGCTGGGATTTTATACCTCCGCAATCTGATTGGAAGAGAAGATAATATAACGTTAAATACTTGTCGCGACGCTACGTTTGTTGCACTTGCTAGCCAACTTGATCCTGCTTCAGTCATTGATCTTGCAACCTGCTTCTTTGGAGTTCAAGGCCTTAACAGACCTCCAGCTCCATCCCCATCTTTGGCTGCACCAGATATTTCCCCAAATCCACCAGCTGCTGCGAGTCCGGGGCCATTGACATTAGGTGTTTCTGATGATAAAAGTCATCATCATTCGTATCATCTAACATTAGTGGCAGGTATTGGCATTGCAGTGACTGTAGCTTCTGTATTGATGCTGGTTGTCTTGATTGTGCTGATTCGAAGGAAAAGCAGAGAGCTTAAGGATTCTGAAAAGACAGATGCCAACTCGTCAAAATCCTTCCCTTCCCGTCCCATCAAAAAGTATCAGGAAGGGCCTTCTATGTTTAAAAAGTTCAGCTATAAAGAGATCAAGAAGGCGACAGATAGTTTTAGTACAACAATTGGACAAGGTGGATATGGAACTGTTTATAAAGCTCAATTCAGTGATGATTTAGTGGTAGCAGTGAAGAGGATGAACAAAGTCTCCGAGCAGGGAGAGGATGAATTTGGCAGAGAAATAGAGCTGCTTGCAAGATTACATCACCGACATCTTGTTGCTTTAAGAGGCTTTTGTGTTGACAAGCATGAACGGTTTCTTGTGTACGAGTATATGGCTAATGGAAGCTTGAAGGATCATCTTCATGCAACTGGCAGGACCCCTCTAAGTTGGCGGACGAGAATACAAATTGCCATCGATGTCGCCAATGCTTTGGAGTACCTTCACTATTATTGTGATCCCCCACTGTGCCATAGAGACATTAAGTCCAGCAACATTTTACTGGATGAGAACTTTGTTGCTAAGGTTGCAGATTTCGGCCTTGCGCATGCTTCAAAAGGCGGTTCTGTTTTCTTTGAACCCGTAAATACCGATATCCGTGGAACGCCAGGTTATATGGATCCCGAATACGTTATCACGCAAGAGCTTACTGAGAAAAGTGATATATACAGCTACGGCGTGCTGCTTCTGGAAATTGTAACTGGCAGACGTGCGATACAAGATGGGAAGAATTTAGTTGAATGGTCTCAGGTGTACATGATTACGGATTCAAGGATATCTGAACTAGTAGATCCAAGGATCAAGAGTTGTTTTAACTTGGAACAACTTTACACGATCGTGTCGATCGTGAGATGGTGCACCGAGAGAGAAGGCAGGGCAAGGCCCTCGATTAAACAGGTGCTTCGGGTCTTATATGAGAGCTTGGACCCGATGCATCAAGGACTGGTGGAAGCTGTTGATGATGAAGAATATGGAGGAACTGAAGGGAGACAGAGCATGAGCAAGAGAAAAATGCATAAAAGTGAAGTGATTTATCATAGTGGAGATGGAAGGTATCTTGCTTCATCATCAAGCACATCAAGGTCATATTGTAGTAGAAGCTTTTTGCTTGAAACTGGTTCACCACAGTCTCCTCCCAATATTTTGTCTGTCTCAGATCAATTGTTTTAG 1758 43.29 MGLYGVPRNATVFCGVGTKIPVNYACRGRETINQMLESPKFTNVSENCKLPLSEDSVCRKCINAGILYLRNLIGREDNITLNTCRDATFVALASQLDPASVIDLATCFFGVQGLNRPPAPSPSLAAPDISPNPPAAASPGPLTLGVSDDKSHHHSYHLTLVAGIGIAVTVASVLMLVVLIVLIRRKSRELKDSEKTDANSSKSFPSRPIKKYQEGPSMFKKFSYKEIKKATDSFSTTIGQGGYGTVYKAQFSDDLVVAVKRMNKVSEQGEDEFGREIELLARLHHRHLVALRGFCVDKHERFLVYEYMANGSLKDHLHATGRTPLSWRTRIQIAIDVANALEYLHYYCDPPLCHRDIKSSNILLDENFVAKVADFGLAHASKGGSVFFEPVNTDIRGTPGYMDPEYVITQELTEKSDIYSYGVLLLEIVTGRRAIQDGKNLVEWSQVYMITDSRISELVDPRIKSCFNLEQLYTIVSIVRWCTEREGRARPSIKQVLRVLYESLDPMHQGLVEAVDDEEYGGTEGRQSMSKRKMHKSEVIYHSGDGRYLASSSSTSRSYCSRSFLLETGSPQSPPNILSVSDQLF 585
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 6678858 6682961 + Tan0021132.2 Tan01g0696 738120
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan01g0696 585 FunFam Putative receptor-like protein kinase 308 508 - -
Tan01g0696 585 MobiDBLite consensus disorder prediction 120 138 - -
Tan01g0696 585 PANTHER OS01G0750732 PROTEIN 92 538 IPR050885 -
Tan01g0696 585 Gene3D Phosphorylase Kinase; domain 1 194 307 - -
Tan01g0696 585 FunFam Putative receptor-like protein kinase 201 307 - -
Tan01g0696 585 MobiDBLite consensus disorder prediction 191 212 - -
Tan01g0696 585 Pfam Protein kinase domain 235 498 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Tan01g0696 585 MobiDBLite consensus disorder prediction 119 144 - -
Tan01g0696 585 SUPERFAMILY Protein kinase-like (PK-like) 213 501 IPR011009 -
Tan01g0696 585 ProSiteProfiles Protein kinase domain profile. 232 504 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Tan01g0696 585 SMART serkin_6 232 501 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Tan01g0696 585 Gene3D Transferase(Phosphotransferase) domain 1 308 519 - -
Tan01g0696 585 ProSitePatterns Serine/Threonine protein kinases active-site signature. 352 364 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Tan01g0696 585 Pfam SPARK 7 74 IPR043891 -
Tan01g0696 585 ProSitePatterns Protein kinases ATP-binding region signature. 238 260 IPR017441 GO:0005524(InterPro)
Tan01g0696 585 CDD STKc_IRAK 238 500 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan01g0694 Tan-Chr1:6678109 Tan01g0696 Tan-Chr1:6678858 0.00E+00 dispersed
Tan01g0696 Tan-Chr1:6678858 Tan08g2449 Tan-Chr8:75755826 1.10E-67 dispersed
Tan01g0695 Tan-Chr1:6678109 Tan01g0696 Tan-Chr1:6678858 0.00E+00 tandem
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
66998 PF00069 Pkinase 1.10E-50 CL0016 Tan PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan01g0696 - - - 0.0