Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan01g0729 ATGGAGATTGATCTATCACTGAAAATAGATCATCACAAAGAAAAAACTCAGCAAAAAGATGAAGAAAAGCAAGAACAAGAAGATTGTCAACTTCAAGAACAAGAAAAAATTAAGGGAGTTGATCATGAAGATGAAATTGATGTTGCTGCTTCTGGTTTGAAAGTATTTTTGCCACACAACATTAATGTAGGAGAGATTTCAGAGTTGCAGATGGAGATGGATCGTATGAAGGAAGAGAATAAGATGTTGAGAAAAGCAGTGGAACAAACAATGAAAGATTACTATGATCTTGAAATGAAAATTGCTATTATTCAACAAAATAACCTCTACAAAAAGAACTCTCACAACTTTCTATCGTTCCATGGAAATGAAAACAAGAGGCATGAAGAACCAAAACCAGACCTCGAACTCGGAGAGATGGTGAAGAAGAAGAGACGAGTTCGGTCGCCATCGAAGGAAAACGAAATGAGGGAAAGCGAGCTAGGGTTATCATTAGGGCTTCATACAAACAATGATTTGGAAGAAGATAATCATGGGGAATTACAAGAAGAAGCAAGAGAAAAGAACAAAGAATTAGATCTACCACCCAACTTTAACTCAATCCAAAACAAGCCACAAAGGCCTGAGTTGCAAGGAATGGCACCTCCACAAAACAGAAAAGCTAGGGTTTCTGTGAGAGCAAGATGTGAAGCTGCCACAATGAATGACGGTTGCCAATGGAGGAAATATGGTCAAAAAATTGCTAAGGGAAACCCATGTCCTCGAGCCTACTATCGTTGCACGGTTGCACCTGGATGTCCAGTTAGAAAACAGGTCCAAAGATGCTTAGAAGACATGTCAATTCTCATAACAACATATGAAGGAACACACAACCATCCACTCCCTGTAGGAGCCACAGCCATGGCTTCAACAGCTTCAGCAACTGCTTCATTTATGTTATTAGACTCTACTAATCTTTCTCTTCCAAATCTTCAAAACCCTAATATTCTAAACTCGTCTTCGTATTCTCCAACCTTCCTCCATACTACAAACCCTAACGAACTCTCGAAAGGGCTCGTTGTCGACCTCACAAGAAACAACTTTTACAACCCAATGGCGAGCTCGTCAAGCTCACCATTGGCCCAACCGTCCAACTGGATGAAAACGAACTGTCATTCGTATTATCAAAGGAACTTTCAAGCTAATCTTTTGAGTCCCCTTGATGGGCGGACTTGGAAATCGGCGGAGGATAACCAACAGCCATTAACGGCCGAGAGTGTGTCTGCCATTGCTTCCGACCCCAAGTTTCGAGTCGCGGTGGCAGCTGCCATTTCGTCGTTCATTAACAAAGAGACGACGACGGTGCATCCTATCGAACCTTCGTCTTTCGGTCCCCATAAGGATGGCGAAGGCAGCGGTGGTGGCGGCAGCGATAATGGTGGCGGGAACAAGAAATGGGTTGTCGAATCGCTCTCGACGAATGGTAACTAA 1470 42.72 MEIDLSLKIDHHKEKTQQKDEEKQEQEDCQLQEQEKIKGVDHEDEIDVAASGLKVFLPHNINVGEISELQMEMDRMKEENKMLRKAVEQTMKDYYDLEMKIAIIQQNNLYKKNSHNFLSFHGNENKRHEEPKPDLELGEMVKKKRRVRSPSKENEMRESELGLSLGLHTNNDLEEDNHGELQEEAREKNKELDLPPNFNSIQNKPQRPELQGMAPPQNRKARVSVRARCEAATMNDGCQWRKYGQKIAKGNPCPRAYYRCTVAPGCPVRKQVQRCLEDMSILITTYEGTHNHPLPVGATAMASTASATASFMLLDSTNLSLPNLQNPNILNSSSYSPTFLHTTNPNELSKGLVVDLTRNNFYNPMASSSSSPLAQPSNWMKTNCHSYYQRNFQANLLSPLDGRTWKSAEDNQQPLTAESVSAIASDPKFRVAVAAAISSFINKETTTVHPIEPSSFGPHKDGEGSGGGGSDNGGGNKKWVVESLSTNGN 489
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 6908472 6913075 - Tan0002175.1 Tan01g0729 738153
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan01g0729 489 PANTHER WRKY TRANSCRIPTION FACTOR 36-RELATED 21 445 IPR044810 GO:0003700(InterPro)
Tan01g0729 489 MobiDBLite consensus disorder prediction 1 36 - -
Tan01g0729 489 Coils Coil 171 191 - -
Tan01g0729 489 FunFam probable WRKY transcription factor 31 219 296 - -
Tan01g0729 489 MobiDBLite consensus disorder prediction 142 218 - -
Tan01g0729 489 ProSiteProfiles WRKY domain profile. 229 295 IPR003657 GO:0003700(InterPro)|GO:0006355(InterPro)|GO:0043565(InterPro)
Tan01g0729 489 MobiDBLite consensus disorder prediction 142 159 - -
Tan01g0729 489 Coils Coil 12 35 - -
Tan01g0729 489 Gene3D WRKY domain 219 296 IPR036576 GO:0003700(InterPro)|GO:0006355(InterPro)|GO:0043565(InterPro)
Tan01g0729 489 Coils Coil 66 93 - -
Tan01g0729 489 MobiDBLite consensus disorder prediction 448 489 - -
Tan01g0729 489 SUPERFAMILY WRKY DNA-binding domain 227 295 IPR036576 GO:0003700(InterPro)|GO:0006355(InterPro)|GO:0043565(InterPro)
Tan01g0729 489 SMART WRKY_cls 234 294 IPR003657 GO:0003700(InterPro)|GO:0006355(InterPro)|GO:0043565(InterPro)
Tan01g0729 489 MobiDBLite consensus disorder prediction 171 193 - -
Tan01g0729 489 Pfam WRKY DNA -binding domain 235 293 IPR003657 GO:0003700(InterPro)|GO:0006355(InterPro)|GO:0043565(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan01g0729 Tan-Chr1:6908472 Tan09g2157 Tan-Chr9:71677977 1.70E-42 dispersed
Tan01g0729 Tan-Chr1:6908472 Tan05g2089 Tan-Chr5:71364311 7.30E-46 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
26298 PF03106 WRKY 2.00E-24 CL0274 Tan TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan01g0729 - - - 0.0