Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan01g0771 ATGGAGATGAATTCCCCCCACGAGCCCGAGGCGGCCGAGAAAGATGGCGGTGATAAGAAGAAGGAGGAGAAAAAGCACGGGAGTGAGGAGGAGAGCGACGATGACAACGATAGCGACATGCCATCGTCGTTGAGTCTTAGAGAGCTTTCTAAGGTTATTCTTCCACCTTTGGGAGTTTCAAGCTTTACTGATGGCAGTAAAGTCAAGGGCAATAGATGGATTGTCTCTCCCATGAGCTCAAGATACAGGTGGTGGGAGTCGTTCATGGTGGTTTTGGTTGCTTACTCGGCGTGGGTTTACCCATTGGAAGTGGCGTTTATGGACGCAATTCCCAAGCGGGATTTATTAATTGCAGACAATATTGTCGATCTCTTCTTCGCCATTGACATCTTCCTCACCTTCTTCGTTGCTTACATCGATCATCGGACTCAGCTTCTCGTTCGTGATTCTAAGAAGATAGCTATCAGGTACTTGTCAACATGGTTCTTGATGGATTTGGCATCGACAATCCCATTTGAGACAATTGGATACCTTTTTACTGGCAAATATGATTGTGGTCTCCCTTTTGCCCTCCTGGGTTTGCTCAGATTTTGGCGACTGCGACGTGTCAAGCAATTTTTCACTAGGCTTGAGAAGGACATTAGATTCAGCTACTTTTGGGTTCGATGTGCTAGGCTTCTATCTGTGACTTTGTTTTATGTCCATTGTGCCGGATGCCTCTACTACTTGTTGGCTGACCGATATCCAAATGAAGGACAGACCTGGATCGGAACTGCGATTCCGAATTTTAAAGAGATTAGCCTTGGAGTGAGATATATTTCAGCCTTGTATTGGTCTATCACCACAATGACGACTGTTGGTTATGGTGATCTTCATGCTCAGAACACCGTAGAGATGATCTTCATCATTTTCTACATGCTCTTCAATCTTGGCTTAACTGCTTACTTGATCGGTAACATGACAAACTTAGTCGTTGAAGGAACTCGCCGCACGATGGAATTTAGAAACAACATTGAAATGGCGTCAAATTTTGTTAACCGAAACCGCCTCCCTTCGAGGTTGAAGGAACACATATTGGCATACATGTGTTTGAGATTCAAGGCCGAGAGCCTAAACCAACAACATCTGATTGAACAGCTTCCAAAGTCGATTTGCAAAAACATCTGTCAGCAATTGTTTTTGCCAACTGTGGAGAAAGTCTACCTCTTCAAGGGTGTCTCAAAGGAAACACTTGCGCTGCTGGTAGCAAAGATGAAGGCCGAGTATATACCTCCTAAGGAGGACGTGATAATACATAACGAAACTCCCGATGAAGTTTATATCATTGTGTCCGGGGAAATTGAAATTATTGACTGTGATAGGGAGGTGGAGCAGATTGTTGGGACGTTACATTGTGGCAGTATGTTTGGAGAAGTAGGAGCACTTTGTTGCAAAAACCAAAATTTTACATACAGAACCAAAACTCTTTCACAGCTCTTGAGGCTAAAAACAAGTGTACTGCAAGAAGCTATGCATGTCAGGCAAGAAGACAATATGACCATTGTCAAGAACTTCCTTCAGGAAAGGGAGCTCAGCCACAGAATCACCATAGAAGGTTCGCCTGAAAAAGAGGCACCGGTGTTGAGTGAAGAAAAGGATCAAAGTTTCAACTGGAAGCACTCCATCGAATTAGATTTTGCTAGAGTGAACATATACAAAGGACATCCAGTAGCCAGAAAACTGGCTTCTTGTGAAGATCCTGGAAAGCTGATCAGATTGCCACATTCAATGGAGGACCTCAAAAAAGTTGCAGGTGAAAAGTTTGGATTTGATGCAAGAAATGCTATTTTGGCAAATGAAGAAGGCTCTGAAATTGATTCCGTTGATGTGATAAGGGATAACGATAAGCTTTTTTTCATAGTTGCAGATGATAAATTTCTGTAA 1923 43.16 MEMNSPHEPEAAEKDGGDKKKEEKKHGSEEESDDDNDSDMPSSLSLRELSKVILPPLGVSSFTDGSKVKGNRWIVSPMSSRYRWWESFMVVLVAYSAWVYPLEVAFMDAIPKRDLLIADNIVDLFFAIDIFLTFFVAYIDHRTQLLVRDSKKIAIRYLSTWFLMDLASTIPFETIGYLFTGKYDCGLPFALLGLLRFWRLRRVKQFFTRLEKDIRFSYFWVRCARLLSVTLFYVHCAGCLYYLLADRYPNEGQTWIGTAIPNFKEISLGVRYISALYWSITTMTTVGYGDLHAQNTVEMIFIIFYMLFNLGLTAYLIGNMTNLVVEGTRRTMEFRNNIEMASNFVNRNRLPSRLKEHILAYMCLRFKAESLNQQHLIEQLPKSICKNICQQLFLPTVEKVYLFKGVSKETLALLVAKMKAEYIPPKEDVIIHNETPDEVYIIVSGEIEIIDCDREVEQIVGTLHCGSMFGEVGALCCKNQNFTYRTKTLSQLLRLKTSVLQEAMHVRQEDNMTIVKNFLQERELSHRITIEGSPEKEAPVLSEEKDQSFNWKHSIELDFARVNIYKGHPVARKLASCEDPGKLIRLPHSMEDLKKVAGEKFGFDARNAILANEEGSEIDSVDVIRDNDKLFFIVADDKFL 640
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 7356834 7365315 + Tan0011665.1 Tan01g0771 738195
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan01g0771 640 PRINTS EAG/ELK/ERG potassium channel family signature 119 129 IPR003938 GO:0005249(InterPro)|GO:0006813(InterPro)|GO:0016020(InterPro)
Tan01g0771 640 PRINTS EAG/ELK/ERG potassium channel family signature 298 309 IPR003938 GO:0005249(InterPro)|GO:0006813(InterPro)|GO:0016020(InterPro)
Tan01g0771 640 PRINTS EAG/ELK/ERG potassium channel family signature 272 289 IPR003938 GO:0005249(InterPro)|GO:0006813(InterPro)|GO:0016020(InterPro)
Tan01g0771 640 PRINTS EAG/ELK/ERG potassium channel family signature 316 325 IPR003938 GO:0005249(InterPro)|GO:0006813(InterPro)|GO:0016020(InterPro)
Tan01g0771 640 PRINTS EAG/ELK/ERG potassium channel family signature 130 139 IPR003938 GO:0005249(InterPro)|GO:0006813(InterPro)|GO:0016020(InterPro)
Tan01g0771 640 MobiDBLite consensus disorder prediction 1 31 - -
Tan01g0771 640 ProSiteProfiles KHA domain profile. 561 640 IPR021789 -
Tan01g0771 640 SUPERFAMILY cAMP-binding domain-like 329 519 IPR018490 -
Tan01g0771 640 CDD CAP_ED 402 505 IPR000595 -
Tan01g0771 640 MobiDBLite consensus disorder prediction 1 43 - -
Tan01g0771 640 Pfam KHA, dimerisation domain of potassium ion channel 561 632 IPR021789 -
Tan01g0771 640 PANTHER POTASSIUM CHANNEL AKT1 30 527 IPR045319 GO:0005249(InterPro)|GO:0006813(InterPro)
Tan01g0771 640 FunFam Potassium channel KAT2 390 525 - -
Tan01g0771 640 Pfam Cyclic nucleotide-binding domain 425 504 IPR000595 -
Tan01g0771 640 SMART cnmp_10 402 519 IPR000595 -
Tan01g0771 640 SUPERFAMILY Voltage-gated potassium channels 77 325 - -
Tan01g0771 640 Gene3D - 83 325 - -
Tan01g0771 640 Gene3D Jelly Rolls 369 540 IPR014710 -
Tan01g0771 640 Pfam Ion transport protein 82 331 IPR005821 GO:0005216(InterPro)|GO:0006811(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro)
Tan01g0771 640 ProSiteProfiles cAMP/cGMP binding motif profile. 402 521 IPR000595 -
Tan01g0771 640 FunFam Potassium channel KAT3 84 326 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan01g0771 Tan-Chr1:7356834 Tan05g2590 Tan-Chr5:77227450 3.40E-144 dispersed
Tan01g0771 Tan-Chr1:7356834 Tan01g0772 Tan-Chr1:7356834 3.20E-283 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan01g0771 K21867 - csv:101205212 1092.03