Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan01g0793 ATGGGCAAAGGGCCATTTTCTTTTCGCCGGAGCAGCAGCCGTCGCCGCCCTAAGAAGGCGGCTCAGTCATCACCGTTGTTGTCGCCTCAGCCACCTTTGCCGATTGGTGCCGGTTCTCCTCCCATTTACAATAATGGCAGCGGCTTGGTTGGTGGTGGTGGTGGGGCTGTTGGAAAGGTGAAGAAGAAGGCTGGAGGAGCGAGGCTGTGGATGCGTCTCGACAGGTTGGGGCAGTCAGAGCTTTTAGAGTGGGACAAGAGCGCTATAATTCGACGTGCTGCAATTCCGGCTAGGGATTTGAGGATTCTTGGTCCTGTTTTCTCCGATTCCTCTAACATACTCGCCAGGGAAAAGGCCATGGTTGTTAATTTAGAGTTCATAAAAGCTATAGTTACTGCTGAAGAAGTCCTACTATTTGATCCTCTTCGCCAAGAGGTTATTCCATTTGTGGATCAGCTAAAGAAGCTACTTGCTAAGAAGAGTGCATCTCAGGGCCATGGAACTGTAGATGAACGTGAAAATGATGTGAATGTTTCTAGAGGAGGAAAGTGGTTGCCAGTTTCAGAAGCTGCTGAAGGTGTGCAGTATGAGCTCCCGTTTGAGTTTCAGGTTCTAGAAAATGCGTTGGAGGTTGTGTGTATGTACTTAGATTCCAGTGTGACGGACCTTGAGAGAGATGCTTATCCTGTCCTGGATGAACTGGCTAGGAATGTCAGCACAAAGAATCTAGAACGTGTGAGGAGCTTGAAAAGTAATCTTACTCGTATTCTTGCACGCGTTCAAAAGGTGCGGGACGAGATAGAACATCTATTAGATGATAATGAAGATATGGCACAACTATATTTGACGAGGAAATGGATGCAGAATCAACAATCTGATGCTTTGCTGGGAGGTCTAGCTTCAAACAGTACCACTGCCATTGTTCCCCACCTTCGTCGACTTAGTTCCACCCGGAGTGGAAGTGTGGTGACCAGCAATCTTTTAGATGACAATGATGTAGAGGATCTGGAGATGTTGCTCGAGGCGTATTTTATGCAGTTAGATGGAACTCGTAACAGGATATTATCGGTTAGGGAATACATCGATGACACCGAGGATTATGTTAATATTCAACTTGACAACCAAAGAAATGAACTCATTCAGTTCCAGTTGACACTGACCATTGCTTCATTTGCCATAGCCGTTGAAACCTTAATCGCCGGGTTGTTTGGCATGAACATCCCTTGTACATTATACGACACGGATGGGATATTCGGGTACTTCGTCGGAGGTACTTCAGCTGGTTGTTTGTTGCTTTTTATGCTTATTATTGGGTATGCAAGATGGAAGAAGCTTCTTGGTTCATGA 1347 46.03 MGKGPFSFRRSSSRRRPKKAAQSSPLLSPQPPLPIGAGSPPIYNNGSGLVGGGGGAVGKVKKKAGGARLWMRLDRLGQSELLEWDKSAIIRRAAIPARDLRILGPVFSDSSNILAREKAMVVNLEFIKAIVTAEEVLLFDPLRQEVIPFVDQLKKLLAKKSASQGHGTVDERENDVNVSRGGKWLPVSEAAEGVQYELPFEFQVLENALEVVCMYLDSSVTDLERDAYPVLDELARNVSTKNLERVRSLKSNLTRILARVQKVRDEIEHLLDDNEDMAQLYLTRKWMQNQQSDALLGGLASNSTTAIVPHLRRLSSTRSGSVVTSNLLDDNDVEDLEMLLEAYFMQLDGTRNRILSVREYIDDTEDYVNIQLDNQRNELIQFQLTLTIASFAIAVETLIAGLFGMNIPCTLYDTDGIFGYFVGGTSAGCLLLFMLIIGYARWKKLLGS 448
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 7556071 7565795 + Tan0002713.2 Tan01g0793 738217
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan01g0793 448 Gene3D - 58 141 - -
Tan01g0793 448 CDD Mrs2_Mfm1p-like 70 445 IPR039204 -
Tan01g0793 448 MobiDBLite consensus disorder prediction 1 38 - -
Tan01g0793 448 Pfam CorA-like Mg2+ transporter protein 335 439 IPR002523 GO:0016020(InterPro)|GO:0030001(InterPro)|GO:0046873(InterPro)|GO:0055085(InterPro)
Tan01g0793 448 Gene3D Magnesium transport protein CorA, transmembrane region 145 379 - -
Tan01g0793 448 Pfam Magnesium transporter MRS2-like 83 291 - -
Tan01g0793 448 PANTHER RNA SPLICING PROTEIN MRS2, MITOCHONDRIAL 59 445 IPR039204 GO:0015095(PANTHER)|GO:0015693(PANTHER)
Tan01g0793 448 SUPERFAMILY Magnesium transport protein CorA, transmembrane region 384 435 IPR045863 -
Tan01g0793 448 FunFam Magnesium transporter MRS2-1 58 141 - -
Tan01g0793 448 Coils Coil 246 280 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan01g0793 Tan-Chr1:7556071 Tan06g2463 Tan-Chr6:77240801 1.60E-87 dispersed
Tan01g0792 Tan-Chr1:7556071 Tan01g0793 Tan-Chr1:7556071 2.20E-238 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan01g0793 K16075 - csv:101203496 690.649