Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan01g0795 ATGTGGGGGGCAGAGGCTACTCAGCAAGGAAATTGTTCCAAATACATAGGCAGAGAGCTTCCTCATTGTTGTGAGAAGAAGCCTGTGATTGTCGATCTTATGCCTGGAGCTCCTTATAAGTTGCAGGTGGCCAATTGTTGTAAAGGAGGTGTGCTGTCTTCCATGAGACAAGACTCTGCCAACTACGGAGCTGCCTTCCAAATGAATGTTGGGAAGTCTGCTGGAAAGGGTGTAGATAACAAAATGCCTGCAAATTTCACACTGGGGCTTCCTGGATATACTTGTAGTGACCCATTTCAAGTCTCTCCAACCAAGTTCAGTAAGGATGGCGGTCGCCGGTGGACACAAGTTCTAGAAACATGGAATGTGACCTGCGTTTACTCACAATTTCGATCATCCCCGACACCGGGGTGCTGTGTTTCGTTGTCGTCCTTCTACAACAGCACCATTGTTCCTTGCCCTCAGTGCAGCTGTGGTTGCCAAGGGCTAGAGGGAACAAAATGTGTCAAGTCAGGCGAAACTCCTTCAGTGTTGCAACTTCCACATGAACATTACATTGCCGAAGTAGAACCATTGGTGAGGTGTTCACAGCACATGTGCCCAATAAGAGTGCATTGGCATGTGAAACAGAGTTATACACAGTATTGGAGGGTAAAGATAACAATTACAAATCTAAATTTTGCTAAGAACTACTCTCAATGGAACTTAGTAGTGTTGCATCCCAACTTGAGGAATATTACTCAAGTTTTCAGCTTCAACTACAGCCCCCTCAATCAGTATGGTAACATCAATGACACAGGTATGTTTTGGGGGTTACACTTCTACAATGACCTGTTACTCACGTCAGGAGAGAGAGGAAATGTTCAAACAGAGATACTTCTTCAAAAAGATGCAGAAATTTTCACTTTCAGAGAAGGATGGGCATTCCCAAGAAGAATTTTGTTCAATGGGGATGAATGTGTAATGCCACCTCCAGACCAATATCCAAGGCTCCCAAACAAAGCTCATAGGGCCATGGCAGCCTCATACATAGTTTTCTTCTTCTTGTTTCTCTCTGTATCATTATAA 1068 44.19 MWGAEATQQGNCSKYIGRELPHCCEKKPVIVDLMPGAPYKLQVANCCKGGVLSSMRQDSANYGAAFQMNVGKSAGKGVDNKMPANFTLGLPGYTCSDPFQVSPTKFSKDGGRRWTQVLETWNVTCVYSQFRSSPTPGCCVSLSSFYNSTIVPCPQCSCGCQGLEGTKCVKSGETPSVLQLPHEHYIAEVEPLVRCSQHMCPIRVHWHVKQSYTQYWRVKITITNLNFAKNYSQWNLVVLHPNLRNITQVFSFNYSPLNQYGNINDTGMFWGLHFYNDLLLTSGERGNVQTEILLQKDAEIFTFREGWAFPRRILFNGDECVMPPPDQYPRLPNKAHRAMAASYIVFFFLFLSVSL 355
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 7584424 7587641 - Tan0020549.1 Tan01g0795 738219
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan01g0795 355 Pfam COBRA-like protein 1 128 IPR006918 GO:0010215(InterPro)|GO:0016020(InterPro)
Tan01g0795 355 PIRSF COBRA 1 355 IPR006918 GO:0010215(InterPro)|GO:0016020(InterPro)
Tan01g0795 355 PANTHER PROTEIN COBRA 1 350 IPR006918 GO:0010215(InterPro)|GO:0016020(InterPro)|GO:0046658(PANTHER)|GO:0052324(PANTHER)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan01g0795 Tan-Chr1:7584424 Tan09g2023 Tan-Chr9:70835222 1.90E-115 dispersed
Tan01g0795 Tan-Chr1:7584424 Tan09g2022 Tan-Chr9:70831783 4.70E-111 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan01g0795 - - - 0.0