Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Tan01g0808 | ATGGGGTGCGTTTGTTGTAAGCCCTCTGCTATTGAAGATAGCAAGGAAAGTCCAAGGGAGAGGTTGTCAAGTAAGGCCTCGTCTGACCTGCGGGTGGCTAGAGTGACTTCATCATCGAGGGATGAAGCTTATCGATCTAAGGATCAGCATGATGGTAATGATGCAAGAGTGATGTTGATTGACAAGCAGGTGAATGGGTCGGGTCGACTGCAGGGCGAGAATTTTGAGAGGAAGAGGGAGAAGATGGAGCATATGGTGGCTGCTCAACATCAACATCCTTCAATGGGTAGAATTCCGAAGGCAGCAGAGGGAGACCACATTGCTGCAGGGTGGCCGCCGTGGCTGGCTGCAGTTGCTGGAGAGGCAATCAGAGGATGGCTACCCCGACGAGCTGATTCTTTTGAGAAATTGGATAAAATTGGCCAAGGGACATATAGTAATGTATATAGGGCTCGTGACCTTGACCAAAAGAAAATTGTTGCTTTGAAGAAAGTAAGGTTTGACAACCTGGAACCTGAGAGCGTCCGCTTTATGGCTAGGGAAATTCACATATTGCGTAGACTTGATCATCCAAATGTGATAAAGCTGGAGGGTCTAGTGACATCAAGGATGTCTTGCAGCCTCTATCTTGTTTTTGAGTACATGGAACATGACTTGGCAGGACTTGCTTCACACCCTGGTGTGAAGTTTACAGAGGCGCAGGTCAAATGTTACATGCAGCAACTTTTACGTGGACTTGATCATTGTCACAGTCATGGAGTTCTACATCGGGATATTAAGGGTTCCAACCTTTTAATTGACAATAATGGCATCTTGAAAATTGCAGACTTTGGTCTAGCAAGTTTTTTTGATATCCACCAAAATCAACCACTGACAAGTCGGGTTGTAACTCTTTGGTATCGACCACCTGAGCTTTTACTTGGCGCCACTTATTATGGTACGGCTGTGGATTTGTGGAGTACTGGCTGCATACTTGCTGAATTGTATGCTGGGAAGCCCATTATGCCAGGAAGAACGGAGGTGGAACAGCTACATAAAATATTTAAACTCTGTGGCTCTCCTTCGGAGGATTATTGGAGAAAGTCAAGGTTGCCACATGCAACGATATTTAAGCCGCAACAGCCCTATAGACGCTGTGTTGCAGACACGTTTAAGGATTTCCCTGCTCCAGCTTTAGCTCTCATTGAGACGTTACTCTCTATAGATCCTGCTGATCGTGGCTCTGCTGCTCTCGCCCTTAAAAGTGAATTTTTTTCTACAAAGCCACTTCCTTGCGATCCTTCAAGCTTGCCAAAATATCCTCCGAGCAAAGAATTTGATGCCAAGATAAGGGATGAGGAAGCTAGAAGACAAGGAGCAGTAGGAAGCAAGGGACACCGACTTGACCTGCAAAGGAAAGATAGAGAGTCTCGAGCCGTCCCTGCACCTGATGCCAATGCTGAGTTAGCCTCATCAATGCAGAAAAGGCAATCCAATTCGAAGAGCCGGAGTGAGAAGTTTAACCCACATCCAGAAGAAGCTTCTGGCTTTCCAATTGATCCACCTAGACCTTCACAAGGACCAGAAAGAATGGATTCTCAGGTGCGTCATCCTAAGAAAGCCTCACATTCAGGGCCACTTGCTCAGCGGGCTGCTTGGGCGAAGGCTAGTAAGAACCCAGATGACGCTCCCAAAATCTCAACCGGGGCCGAGACTTTCACAACTTCAGGGCTAGTAGCAGCTAGAAGAAGTATGCTGGCTGAAGATTGCAGGGAAAAGTCCGACTCTTCACAAGGAGAGGTTCAAAAACTAATTGGCAGGTTTCCTGGTTCCTTCAAAGAAACCTCGGAATCATCGATGCTACCGGACCAGAAGTTCTCAAATCACAGTATTGTTGGGTCACACGACAAAGAAAGGAGCAGCACCAAAGACCCTATAGTTGTGGGTTATGGCTCAAAGGGTCATAAGATTCATTACTCTGGTCCATTACTGGTTCCTTCTGGCAACATGGACCAAATGTTGAAGGACCATGATCGCCATATCCAAGAAGCAGTAAGACGAGCTCGGCTTGACAAGGCTAAGGTACGAAAGGTTCAAGCTGACGGGAAACAGATGTCGACAAATTCATTATTCGTCTCCGGTCGTTAA | 2127 | 46.69 | MGCVCCKPSAIEDSKESPRERLSSKASSDLRVARVTSSSRDEAYRSKDQHDGNDARVMLIDKQVNGSGRLQGENFERKREKMEHMVAAQHQHPSMGRIPKAAEGDHIAAGWPPWLAAVAGEAIRGWLPRRADSFEKLDKIGQGTYSNVYRARDLDQKKIVALKKVRFDNLEPESVRFMAREIHILRRLDHPNVIKLEGLVTSRMSCSLYLVFEYMEHDLAGLASHPGVKFTEAQVKCYMQQLLRGLDHCHSHGVLHRDIKGSNLLIDNNGILKIADFGLASFFDIHQNQPLTSRVVTLWYRPPELLLGATYYGTAVDLWSTGCILAELYAGKPIMPGRTEVEQLHKIFKLCGSPSEDYWRKSRLPHATIFKPQQPYRRCVADTFKDFPAPALALIETLLSIDPADRGSAALALKSEFFSTKPLPCDPSSLPKYPPSKEFDAKIRDEEARRQGAVGSKGHRLDLQRKDRESRAVPAPDANAELASSMQKRQSNSKSRSEKFNPHPEEASGFPIDPPRPSQGPERMDSQVRHPKKASHSGPLAQRAAWAKASKNPDDAPKISTGAETFTTSGLVAARRSMLAEDCREKSDSSQGEVQKLIGRFPGSFKETSESSMLPDQKFSNHSIVGSHDKERSSTKDPIVVGYGSKGHKIHYSGPLLVPSGNMDQMLKDHDRHIQEAVRRARLDKAKVRKVQADGKQMSTNSLFVSGR | 708 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
1 | 7857122 | 7864485 | + | Tan0011016.1 | Tan01g0808 | 738232 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Tan01g0808 | 708 | Pfam | Protein kinase domain | 134 | 418 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Tan01g0808 | 708 | SMART | serkin_6 | 134 | 418 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Tan01g0808 | 708 | MobiDBLite | consensus disorder prediction | 447 | 563 | - | - | |
Tan01g0808 | 708 | PANTHER | CELL DIVISION PROTEIN KINASE | 133 | 418 | IPR050108 | GO:0000307(PANTHER)|GO:0004674(PANTHER)|GO:0005634(PANTHER)|GO:0006468(PANTHER)|GO:0008353(PANTHER)|GO:0032968(PANTHER)|GO:0070816(PANTHER) | |
Tan01g0808 | 708 | SUPERFAMILY | Protein kinase-like (PK-like) | 128 | 426 | IPR011009 | - | |
Tan01g0808 | 708 | FunFam | probable serine/threonine-protein kinase At1g54610 | 121 | 216 | - | - | |
Tan01g0808 | 708 | MobiDBLite | consensus disorder prediction | 35 | 53 | - | - | |
Tan01g0808 | 708 | CDD | STKc_CDK9_like | 134 | 418 | - | - | |
Tan01g0808 | 708 | Gene3D | Phosphorylase Kinase; domain 1 | 121 | 216 | - | - | |
Tan01g0808 | 708 | MobiDBLite | consensus disorder prediction | 1 | 53 | - | - | |
Tan01g0808 | 708 | MobiDBLite | consensus disorder prediction | 685 | 708 | - | - | |
Tan01g0808 | 708 | ProSiteProfiles | Protein kinase domain profile. | 134 | 418 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Tan01g0808 | 708 | FunFam | probable serine/threonine-protein kinase At1g54610 | 217 | 458 | - | - | |
Tan01g0808 | 708 | MobiDBLite | consensus disorder prediction | 694 | 708 | - | - | |
Tan01g0808 | 708 | MobiDBLite | consensus disorder prediction | 12 | 27 | - | - | |
Tan01g0808 | 708 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 254 | 266 | IPR008271 | GO:0004672(InterPro)|GO:0006468(InterPro) | |
Tan01g0808 | 708 | ProSitePatterns | Protein kinases ATP-binding region signature. | 140 | 163 | IPR017441 | GO:0005524(InterPro) | |
Tan01g0808 | 708 | Gene3D | Transferase(Phosphotransferase) domain 1 | 217 | 457 | - | - | |
Tan01g0808 | 708 | MobiDBLite | consensus disorder prediction | 447 | 474 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Tan01g0808 | Tan-Chr1:7857122 | Tan05g0762 | Tan-Chr5:5558954 | 2.10E-203 | dispersed | |
Tan01g0808 | Tan-Chr1:7857122 | Tan04g0087 | Tan-Chr4:630286 | 7.80E-65 | transposed |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
67000 | PF00069 | Pkinase | 1.00E-68 | CL0016 | Tan | PK |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Tan01g0808 | - | - | - | 0.0 |