Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan01g0850 ATGAGTCCACCAAATTGTTTTTGGCCAATATTCAAGCAACGGAAGGTGAAACATGTTACAAGCAATGGAGAACCGGTACACATAGAGACAGGAAAATCCAATGGTTCCCCAAATGGAAAGAGTGAAGATGTAGCTGCAACTCGAATTCAAAATGCATTTCGAGCATTTACGGCCAGAAAGATTGTACATAATTCGAAAGGGCCAGAGAAATGCCAGGATCTAATTCAAGGTGAAACGGCTACAAAACAAGTGATAAACTTCATTCATTCATGGAGCAGAATGCAGCAAGAAATTAGAGCACGTAGACTCTGTATGGTTACAGAATATCGAGTCAAGCAAAAGAAACTGGAAAATCAGCTGAAGCTTGAGGCTAAAATTCATGAACTTGAGGTAGAATGGTGCAGTGGGTCCGAAACGAAGGAGGAAATACTTTTCAAGATTCAGCAGCGAGAAGAAGCTGCTGTCAAACGGGAGCGAGCCATGGCTTATGCATTCTCTCATCAGTGGAGGGCTAACTCCATCTTAGATCTAAGTCCGGCTTCATACAGCCTTGACAAAGAAAACTGGGGATGGAGCTGGAAGGAGAGATGGATTGCTGCTCGGCCATGGGAGATCCGAGCTAATACTCATCCCACGATTCCAAAGAAGGTGCAGACGAAGCAAACAAGCAAACTCAATAAAGTGACATATCAACCGGGGTCGAAGGTCTCAAACTCAGCCAGACATTCTCCATCAAATAGCAAGGGGAGTTCAAAGGCCAGAAATTCTGCTATAGCCAACTGCTGA 786 44.15 MSPPNCFWPIFKQRKVKHVTSNGEPVHIETGKSNGSPNGKSEDVAATRIQNAFRAFTARKIVHNSKGPEKCQDLIQGETATKQVINFIHSWSRMQQEIRARRLCMVTEYRVKQKKLENQLKLEAKIHELEVEWCSGSETKEEILFKIQQREEAAVKRERAMAYAFSHQWRANSILDLSPASYSLDKENWGWSWKERWIAARPWEIRANTHPTIPKKVQTKQTSKLNKVTYQPGSKVSNSARHSPSNSKGSSKARNSAIANC 261
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 8243214 8255444 + Tan0022304.1 Tan01g0850 738274
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan01g0850 261 MobiDBLite consensus disorder prediction 211 261 - -
Tan01g0850 261 ProSiteProfiles IQ motif profile. 42 70 - -
Tan01g0850 261 PANTHER IQ-DOMAIN 5-RELATED 33 251 - -
Tan01g0850 261 Coils Coil 112 132 - -
Tan01g0850 261 MobiDBLite consensus disorder prediction 212 261 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan01g0850 Tan-Chr1:8243214 Tan03g2549 Tan-Chr3:78698596 1.70E-57 dispersed
Tan01g0850 Tan-Chr1:8243214 Tan04g0573 Tan-Chr4:4837800 2.40E-27 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan01g0850 - - - 0.0