Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan01g0913 ATGGAATTTTCAACTCCTCTATTCAGGATTCTCGGTGTTCTTCTTTTGTGGATTTTGCTGTTATCCCAGGGCTTTGGATCCCACGCTCAGCTTTTGCCCGAAACCGAAGTGAAAGCCCTTCAAACAATATCTTCGAAACTAAAGAATTTAAGCTGGAATGTTACCCGGAGTTCTTGCATTCAAGGTGAAGGCTTTTCCAATGGAGCTTTTCCGGGAAACCAAATCTTGAGGAATGTCTCATGCAATTGTACTTCCTCTGTTTGTCATGTGACAATCATCCTGCTTAAGGGTCTCAATCTAACAGGAACTTTTCCAGCTGAATTTGGTAATCTTACTCATCTGCAGGAACTTGATCTTACTCGCAATCATATTAATAGCCAACTACCCACTAGTCTTGTCAATGCTCCTCTTGTCAAACTTTCTCTCTTGGGAAACAGGCTAAACGGTTCAATTCCCAAGGAAATTGGTGACATTGGCACCCTTGAAGAGCTGGTCTTGGAAGACAACCAGTTATCTGGAATTCTACCTCCCAGCCTTGGAAATCTGAACCGTTTGAGTAGACTGCTTCTGTCTGCAAACAATTTCACAGGAAAAATACCAGACTCATTTGGAAAATTAAAGAACTTGGTTGATTTTAGGATAGATGGGAATGGACTGTCTGGGAAGATTCCTGAACTCATTGGGAATTGGATCAACCTTGACAGACTGGATATTCAAGGAACATCGATGGAAAGCCCCATTCCTTCTACAATATCTCAATTGAAAAACCTAACTCAATTAAGGATATCTGATTTGAAGGGATCATTTATAAGTTTCCCTAATTTGACAGATATGATAAACATGGAAGAATTGGTCCTGAGAAACTGTTTAATTAATGGTTCAATCCCCGAGTATATTGGAGAAATGAATAAATTATCAACTCTAGATCTAAGCTTCAACCATTTAACTGGTCCAATTCCTGAGACATTTCAGAATCTGATGAAGAAAAAGATAGACTTCATGTTTCTGACAAACAACTCACTAAATGGTGAAGTGCCAGGTTGGATCTTGAGGAGCAAAAAGAACATAGATTTGTCTTACAACAATTTCTCAGGGTCTACTCTTGCTAGTTGCCAACAAACACCTGTGAACTTGATAGCCAGTTACCTACCTGCAGCAAATCATCAGGTTCCTTGGTGCCTCAAGAAGGACCTTCCATGCTCTGGAAAAGCTGAACAACATTCCTTGTTTATTAATTGTGGAGGAACCAGATTGAGGGCTGATGGGCATGATTATGAAGAGGACTTAACTACAGAAGGCAAGTCAAACTTCTTTTCTGTTTCAGAAAAATGGGCTTATAGCAGTACAGGAGTTTTTTTGGGTGATGAAAATGCCGACTACTTAGCTACAAATAAGTTCGGCCTGAATGTGAGTGGTCCGCGCTATTATCAAAATGCCCGACTTTCCCCTCTCTCCCTCAAATATTATGGTCTTTGCCTGCGGAGTGGAAGCTACAATGTGAAGCTTCATTTTGCAGAAATTATGTACTCTAATGATCAAACTTTTAGCAGCCTGGGAAAGCGTATATTTGATATATCAATTCAAGGAAAACTAGTTAAGAAGGATTTCAATATTGTGGAGGCAGCTGGGGGTGTTGGTAATAACTTCACAGTAGAAGATAAAAATGTTCTTGTCAATGGAAGCACCCTTGAGATTCATCTATATTGGGCTGGTAAAGGAACCACAGCTGTGCCAGACAGAGGAGTTTATGGACCCCTTATTTCTGCTATCACAGTTACACCAAACTTTGAAATTGACGAGGGAGGACTATCGGCTGGGGCACTTGCTGGCATTATAATTTCTTCATGTGCAGCAGTTATCATATTGGTCGTCGTATTTCTTTGGATCAAAGGTTACATATGTAAGAAGGAGGTCCCAGATAATGAACTTTCTGGCGTAGATTTACAAACGGGTCATTTTACTTTGAAACAAATTAAAGCTGCCACCAACAACTTTGATCCTAAAAGTAAAATAGGCGAGGGTGGATTTGGGCCTGTCTATAAGGGTGTACTGTCAGATGGTGCTTTGATTGCCGTGAAGCAACTCTCTTCGAAATCGAAGCAAGGGAGCCGTGAGTTTGTTACTGAGATTGGCATGATATCTGCATTGCAACACCCAAACCTTGTCAAGCTCTATGGCTGCTGTGTTGAGGGAAACCAATTGTTGCTTGTATATGAATACATGGAAAACAATAGTCTTGCCCGTGCGCTTTTCGGTCGAGAAGAACAAAGGCTACATCTTGACTGGCGAACAAGGAAGAAGATATGCTTGGAAATAGCTAGGGGGTTAGCTTACCTTCATGAAGAATCAAGGTTGAAAATTGTTCATAGAGACATAAAGGCCACAAATGTGCTACTCGATAAAGATCTTAATGCCAAGATTTCTGACTTCGGTTTGGCTAAGCTTGATGAAGAGGAGAACACCCACATAAGCACACGAATTGCTGGAACCATAGGTTATATGGCACCTGAGTATGCAATGAGAGGATACTTGACTGATAAGGCAGATGTTTACAGCTTTGGAGTTGTTGCTTTAGAGATAGTTAGCGGGAAAAGCAACACAAATTATAGGCCAAAGGAAGAGTTTGTTTATCTCCTTGATTGGGCCTATGTACTGGAAGAGCAGGGAAACCTTCTAGAACTGGTAGATCCAGACCTTGGTTCAAAGTACTCATCAGAGGAAGCAATGAGGATGTTAAACATAGCTCTCTTATGCACCAACCCATCTCCCACTCTCAGACCAGCCATGTCTTCTGTGGTGAGTATGCTTGAAGGTAAGATTGCAGTCCAAGCACCGATCATCAAGCGCACCGCGTCAGGCCAAGATCCGAGGTTTAAAGCGTTCGAGAAGCTCTCACACGACAACAGATCACAGATTTCGAGCTCGACATTTTCGCAAGAAGCTGAGGCTCAGAAGAGCATGTTAATGGATGGGCCATGTTCTGATTCCTCAGTATCCATTGACAGCAATGGCAAGAATCTCTACCATTCTGCATCGAGTGACCCCCTCGAAAATCATCGTCGTGCTGATGATTCGAAACCATCAGCTTAA 3090 41.75 MEFSTPLFRILGVLLLWILLLSQGFGSHAQLLPETEVKALQTISSKLKNLSWNVTRSSCIQGEGFSNGAFPGNQILRNVSCNCTSSVCHVTIILLKGLNLTGTFPAEFGNLTHLQELDLTRNHINSQLPTSLVNAPLVKLSLLGNRLNGSIPKEIGDIGTLEELVLEDNQLSGILPPSLGNLNRLSRLLLSANNFTGKIPDSFGKLKNLVDFRIDGNGLSGKIPELIGNWINLDRLDIQGTSMESPIPSTISQLKNLTQLRISDLKGSFISFPNLTDMINMEELVLRNCLINGSIPEYIGEMNKLSTLDLSFNHLTGPIPETFQNLMKKKIDFMFLTNNSLNGEVPGWILRSKKNIDLSYNNFSGSTLASCQQTPVNLIASYLPAANHQVPWCLKKDLPCSGKAEQHSLFINCGGTRLRADGHDYEEDLTTEGKSNFFSVSEKWAYSSTGVFLGDENADYLATNKFGLNVSGPRYYQNARLSPLSLKYYGLCLRSGSYNVKLHFAEIMYSNDQTFSSLGKRIFDISIQGKLVKKDFNIVEAAGGVGNNFTVEDKNVLVNGSTLEIHLYWAGKGTTAVPDRGVYGPLISAITVTPNFEIDEGGLSAGALAGIIISSCAAVIILVVVFLWIKGYICKKEVPDNELSGVDLQTGHFTLKQIKAATNNFDPKSKIGEGGFGPVYKGVLSDGALIAVKQLSSKSKQGSREFVTEIGMISALQHPNLVKLYGCCVEGNQLLLVYEYMENNSLARALFGREEQRLHLDWRTRKKICLEIARGLAYLHEESRLKIVHRDIKATNVLLDKDLNAKISDFGLAKLDEEENTHISTRIAGTIGYMAPEYAMRGYLTDKADVYSFGVVALEIVSGKSNTNYRPKEEFVYLLDWAYVLEEQGNLLELVDPDLGSKYSSEEAMRMLNIALLCTNPSPTLRPAMSSVVSMLEGKIAVQAPIIKRTASGQDPRFKAFEKLSHDNRSQISSSTFSQEAEAQKSMLMDGPCSDSSVSIDSNGKNLYHSASSDPLENHRRADDSKPSA 1029
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 8678425 8691973 - Tan0013313.1 Tan01g0913 738337
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan01g0913 1029 MobiDBLite consensus disorder prediction 1014 1029 - -
Tan01g0913 1029 FunFam probable LRR receptor-like serine/threonine-protein kinase At1g53430 634 740 - -
Tan01g0913 1029 FunFam Probable LRR receptor-like serine/threonine-protein kinase At1g53440 36 198 - -
Tan01g0913 1029 FunFam Putative leucine-rich repeat receptor-like serine/threonine-protein kinase 406 595 - -
Tan01g0913 1029 SMART serkin_6 665 934 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Tan01g0913 1029 Gene3D Ribonuclease Inhibitor 252 391 IPR032675 -
Tan01g0913 1029 Pfam Leucine Rich Repeat 161 182 IPR001611 GO:0005515(InterPro)
Tan01g0913 1029 Pfam Leucine Rich Repeat 304 326 IPR001611 GO:0005515(InterPro)
Tan01g0913 1029 Pfam Leucine Rich Repeat 185 206 IPR001611 GO:0005515(InterPro)
Tan01g0913 1029 Pfam Leucine Rich Repeat 113 133 IPR001611 GO:0005515(InterPro)
Tan01g0913 1029 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN DDB_G0281931-RELATED 14 962 IPR051824 -
Tan01g0913 1029 ProSiteProfiles Protein kinase domain profile. 665 947 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Tan01g0913 1029 MobiDBLite consensus disorder prediction 966 1029 - -
Tan01g0913 1029 ProSitePatterns Serine/Threonine protein kinases active-site signature. 787 799 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Tan01g0913 1029 SUPERFAMILY L domain-like 76 326 - -
Tan01g0913 1029 CDD STKc_IRAK 671 938 - -
Tan01g0913 1029 Gene3D Ribonuclease Inhibitor 40 251 IPR032675 -
Tan01g0913 1029 Pfam Protein tyrosine and serine/threonine kinase 668 934 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Tan01g0913 1029 Gene3D Phosphorylase Kinase; domain 1 633 740 - -
Tan01g0913 1029 MobiDBLite consensus disorder prediction 990 1013 - -
Tan01g0913 1029 MobiDBLite consensus disorder prediction 967 983 - -
Tan01g0913 1029 Pfam Malectin domain 409 590 IPR021720 -
Tan01g0913 1029 Gene3D - 403 595 - -
Tan01g0913 1029 SUPERFAMILY Protein kinase-like (PK-like) 648 944 IPR011009 -
Tan01g0913 1029 SMART LRR_typ_2 111 135 IPR003591 -
Tan01g0913 1029 SMART LRR_typ_2 302 325 IPR003591 -
Tan01g0913 1029 SMART LRR_typ_2 158 182 IPR003591 -
Tan01g0913 1029 FunFam Putative LRR receptor-like serine/threonine-protein kinase 741 948 - -
Tan01g0913 1029 Gene3D Transferase(Phosphotransferase) domain 1 741 948 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan01g0913 Tan-Chr1:8678425 Tan01g4285 Tan-Chr1:107708313 0.00E+00 dispersed
Tan08g2120 Tan-Chr8:73093997 Tan01g0913 Tan-Chr1:8678425 2.00E-75 dispersed
Tan01g0913 Tan-Chr1:8678425 Tan05g2539 Tan-Chr5:76713709 2.20E-209 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
67003 PF07714 PK_Tyr_Ser-Thr 1.30E-49 CL0016 Tan PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan01g0913 - - - 0.0