Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan01g0926 ATGCCGCAAGATCATCCAAAGAAGGAGGCCAAAGAAATCAACTTTTTTACTGAATATGGGGATGCTAATAGATATAAGATTCTTGAAGTTATTGGAAGGGGAAGTTACGGAGTTGTTTGTTCTGCTATTGACATGCAAACCAGGGAAAAAGTTGCAATAAAGAGAATTCACGACATTTTTGATCACATATCTGATGCTATTCGAATCCTTCGTGAAGTTAAGTTGCTTAGATTGTTGCGGCATCCTGATATTGTTGACATCAAGAATATTATGTTGCCACCTTCTAAAAAGGAATTTAAGGACATTTATGTGGTTTTTGAGCTTATGGAATCTGATCTTCATCAAGTTATTAAAGCAAATGATGACTTGACCCGTGAACATCATCAATTCTTCCTCTACCAAATGCTACGTGCATTGAAATTCATGCATACAGCAAATGTGTATCATAGGGATCTGAAGCCTAAGAATATATTGGCAAATGCCAATTGCAAGCTTAAAATTTGTGATTTTGGACTTGCAAGAGTTTCCTTCGGTGACACCCCAACCACGATATTTTGGACAGACTATGTTGCTACTAGATGGTACAGAGCGCCGGAGCTGTGTGGATCGTTCTGTTCCAAGTATACTCCCGCGATAGATATTTGGAGCATCGGCTGCATATTTGCTGAGGTTTTGATGGGGAAGCCACTGTTTCCGGGTAAAAGTGTTGCCCATCAATTGGAGTTGATTACTGATCTTCTCGGGACTCCCTCATTGGAAACCATTGCAAGAGTTCGGAATGAAAAGGCCAGGAAATATTTGACAGAAATGAGAAAGAAATCTCCAATGCCATTTTCACAAAGATTTCCCAATGCGGATCCTACAGCCATCCGCTTATTGCAAAGACTATTAGCATTTGATCCAAAGGATCGACCATCGGCTGTGGAGGCTCTGGCTGATCCTTACTTTAAGGGCCTTGCCAAAGTTGAAAGAGAGCCTTCTTGTCAGCCAATCTCAAGATCGGAATTTGGGTTCGAGAGAGGGAAATTAACGAAGGATGATGCAAGGGAACTATTATACAGAGAAATATTAGAATATCATCCTCAAATTCGTGATGATTATTTGAATGGAACCGAGACTACAAAGCTCCTTTATCCTAGTGTTACAGGTCATTTTAAAAGCCAATTCACCTGCCACAAGGAGAATGGTGGTAAAAGCGCACCGGTTTTGCCTCTAGAACGGAAACACTTCTCCCTACCACGGTTGTGTTCTTACAAACTCAATTTGCGAACCGTTTTCTTAGGTCCACTGTTTGCACGAATTTGGTTTCACCTGATCGTGAGCCGGTTCGGCGAAATCCCAAAGTCTCTAATAACAATGTGGGATTACCTGATAGAAAATCTGGTAAGCCATCAAAGGCTCATCCTCCACCTAAAGTGCCTACTGGACGAGTTTCCGGGCCTGTCCTCCCATACGAGAACAGAAACATAA 1470 41.56 MPQDHPKKEAKEINFFTEYGDANRYKILEVIGRGSYGVVCSAIDMQTREKVAIKRIHDIFDHISDAIRILREVKLLRLLRHPDIVDIKNIMLPPSKKEFKDIYVVFELMESDLHQVIKANDDLTREHHQFFLYQMLRALKFMHTANVYHRDLKPKNILANANCKLKICDFGLARVSFGDTPTTIFWTDYVATRWYRAPELCGSFCSKYTPAIDIWSIGCIFAEVLMGKPLFPGKSVAHQLELITDLLGTPSLETIARVRNEKARKYLTEMRKKSPMPFSQRFPNADPTAIRLLQRLLAFDPKDRPSAVEALADPYFKGLAKVEREPSCQPISRSEFGFERGKLTKDDARELLYREILEYHPQIRDDYLNGTETTKLLYPSVTGHFKSQFTCHKENGGKSAPVLPLERKHFSLPRLCSYKLNLRTVFLGPLFARIWFHLIVSRFGEIPKSLITMWDYLIENLVSHQRLILHLKCLLDEFPGLSSHTRTET 489
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 8808350 8812834 + Tan0007794.1 Tan01g0926 738350
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan01g0926 489 FunFam Mitogen-activated protein kinase 14 119 - -
Tan01g0926 489 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 22 357 IPR050117 GO:0004674(PANTHER)|GO:0004707(PANTHER)|GO:0005634(PANTHER)|GO:0005737(PANTHER)|GO:0035556(PANTHER)
Tan01g0926 489 FunFam Mitogen-activated protein kinase 111 339 - -
Tan01g0926 489 ProSitePatterns Protein kinases ATP-binding region signature. 31 54 IPR017441 GO:0005524(InterPro)
Tan01g0926 489 Pfam Protein kinase domain 25 316 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Tan01g0926 489 SUPERFAMILY Protein kinase-like (PK-like) 20 320 IPR011009 -
Tan01g0926 489 ProSitePatterns MAP kinase signature. 60 163 IPR003527 GO:0004707(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Tan01g0926 489 Gene3D Transferase(Phosphotransferase) domain 1 111 339 - -
Tan01g0926 489 Gene3D Phosphorylase Kinase; domain 1 40 362 - -
Tan01g0926 489 CDD STKc_TDY_MAPK 24 361 - -
Tan01g0926 489 ProSiteProfiles Protein kinase domain profile. 25 316 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Tan01g0926 489 SMART serkin_6 25 316 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan01g0926 Tan-Chr1:8808350 Tan02g0090 Tan-Chr2:1001157 3.60E-202 dispersed
Tan11g0285 Tan-Chr11:2205601 Tan01g0926 Tan-Chr1:8808350 5.50E-25 dispersed
Tan01g0926 Tan-Chr1:8808350 Tan02g0089 Tan-Chr2:1001157 3.60E-202 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
67004 PF00069 Pkinase 4.60E-65 CL0016 Tan PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan01g0926 - - - 0.0