Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan01g0945 ATGGGGCTGCGTTTTTTGTCATACCCACAGAGGAATTTGCTGATGAAGTTCTCATCTCTGCCCCCAGTAACTGCAATTGCCAGCTTCAAAAATGTCAAAGGGGCTTTCCCTTACAGGCGTGTTAGTTGTCAATTGAACTTGGATGATTCCAGCAGCAAGAACAGCCAGATGGAAAGAGTTTACTCCACCATTTCAAATGGGAAATTTAGCAATAAAGAGTTTATTAGTGTTGACTCGCGGCTTTATGAGTATATTCTCTCCAATGTTCGAGAGCCTGAGATCCTGGGGCAACTTCGCGAGGAGACCGCCTCATTGCGTGGTAGCAAAATGCAGGTATCTCCTGATCAAGCACAACTTCTTGCAATGCTTGTTCAGATTCTTGGTGCAAAGCGGTGCATTGAAGTGGGTGTTTACACTGGATATTCGTCCTTAGCTGTTGCACTTGTCCTTCCAGAGTCAGGGCGTTTAGTTGCCTGTGAAAGAGATGCCATATATCTCGAGGTTGCTAAAAGATATTATGAACTTGCTGGTGTTTCACACAAAGTGGATGTGAGACTTGGGCTTGCAGCAGATACACTCAAATCACTTATTGCAAATGGTGAAGCTTGCAGCTATGACTTTGCCTTCATCGATGCTGAGAAGAGGATGAATGAGGAATACTTCGAACTGCTACTGCAACTGGTGAGGGTTGGAGGTTTAATTGTGATTGACAATGTCCTTTGGTACGGAAAAGTAGCTGACTCGACGGTAAATGACAAGAAGACTGATAGCATTAGGAGATTGAATAAAAGGATAATGGAAGATGATCGAGTCAGGATCAGTATGGTACCCATTGGAGATGGCATGACAATTTGCCAAAAGAGATGA 867 43.83 MGLRFLSYPQRNLLMKFSSLPPVTAIASFKNVKGAFPYRRVSCQLNLDDSSSKNSQMERVYSTISNGKFSNKEFISVDSRLYEYILSNVREPEILGQLREETASLRGSKMQVSPDQAQLLAMLVQILGAKRCIEVGVYTGYSSLAVALVLPESGRLVACERDAIYLEVAKRYYELAGVSHKVDVRLGLAADTLKSLIANGEACSYDFAFIDAEKRMNEEYFELLLQLVRVGGLIVIDNVLWYGKVADSTVNDKKTDSIRRLNKRIMEDDRVRISMVPIGDGMTICQKR 288
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 9138611 9144016 + Tan0000906.1 Tan01g0945 738369
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan01g0945 288 PANTHER O-METHYLTRANSFERASE-RELATED 75 287 IPR050362 GO:0008757(PANTHER)
Tan01g0945 288 CDD AdoMet_MTases 131 236 - -
Tan01g0945 288 Gene3D Vaccinia Virus protein VP39 62 288 IPR029063 -
Tan01g0945 288 ProSiteProfiles SAM-dependent O-methyltransferase class I-type profile. 71 288 IPR002935 GO:0008171(InterPro)
Tan01g0945 288 Pfam O-methyltransferase 89 287 IPR002935 GO:0008171(InterPro)
Tan01g0945 288 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 82 288 IPR029063 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan01g0945 Tan-Chr1:9138611 Tan01g0948 Tan-Chr1:9138788 2.90E-159 dispersed
Tan01g0945 Tan-Chr1:9138611 Tan01g0946 Tan-Chr1:9138611 1.80E-156 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan01g0945 - - - 0.0