Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan01g0946 ATGGGGCTGCGTTTTTTGTCATACCCACAGAGGAATTTGCTGATGAAGTTCTCATCTCTGCCCCCAGTAACTGCAATTGCCAGCTTCAAAAATGTCAAAGGGGCTTTCCCTTACAGGCGTGTTAGTTGTCAATTGAACTTGGATGATTCCAGCAGCAAGAACAGCCAGATGGAAAGAGTTTACTCCACCATTTCAAATGGGAAATTTAGCAATAAAGAGTTTATTAGTGTTGACTCGCGGCTTTATGAGTATATTCTCTCCAATGTTCGAGAGCCTGAGATCCTGGGGCAACTTCGCGAGGAGACCGCCTCATTGCGTGGTAGCAAAATGCAGAATTGGCTGTCTTCTCGAAGTTCTCTCAAGATATCAGAGGTATCTCCTGATCAAGCACAACTTCTTGCAATGCTTGTTCAGATTCTTGGTGCAAAGCGGTGCATTGAAGTGGGTGTTTACACTGGATATTCGTCCTTAGCTGTTGCACTTGTCCTTCCAGAGTCAGGGCGTTTAGTTGCCTGTGAAAGAGATGCCATATATCTCGAGGTTGCTAAAAGATATTATGAACTTGCTGGTGTTTCACACAAAGTGGATGTGAGACTTGGGCTTGCAGCAGATACACTCAAATCACTTATTGCAAATGGTGAAGCTTGCAGCTATGACTTTGCCTTCATCGATGCTGAGAAGAGGATGAATGAGGAATACTTCGAACTGCTACTGCAACTGGTGAGGGTTGGAGGTTTAATTGTGATTGACAATGTCCTTTGGTACGGAAAAGTAGCTGACTCGACGGTAAATGACAAGAAGACTGATAGCATTAGGAGATTGAATAAAAGGATAATGGAAGATGATCGAGTCAGGATCAGTATGGTACCCATTGGAGATGGCATGACAATTTGCCAAAAGAGATGA 906 43.71 MGLRFLSYPQRNLLMKFSSLPPVTAIASFKNVKGAFPYRRVSCQLNLDDSSSKNSQMERVYSTISNGKFSNKEFISVDSRLYEYILSNVREPEILGQLREETASLRGSKMQNWLSSRSSLKISEVSPDQAQLLAMLVQILGAKRCIEVGVYTGYSSLAVALVLPESGRLVACERDAIYLEVAKRYYELAGVSHKVDVRLGLAADTLKSLIANGEACSYDFAFIDAEKRMNEEYFELLLQLVRVGGLIVIDNVLWYGKVADSTVNDKKTDSIRRLNKRIMEDDRVRISMVPIGDGMTICQKR 301
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 9138611 9144016 + Tan0000906.2 Tan01g0946 738370
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan01g0946 301 CDD AdoMet_MTases 144 249 - -
Tan01g0946 301 Gene3D Vaccinia Virus protein VP39 62 301 IPR029063 -
Tan01g0946 301 Pfam O-methyltransferase 91 300 IPR002935 GO:0008171(InterPro)
Tan01g0946 301 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 114 301 IPR029063 -
Tan01g0946 301 ProSiteProfiles SAM-dependent O-methyltransferase class I-type profile. 71 301 IPR002935 GO:0008171(InterPro)
Tan01g0946 301 PANTHER O-METHYLTRANSFERASE-RELATED 75 300 IPR050362 GO:0008757(PANTHER)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan01g0946 Tan-Chr1:9138611 Tan01g0948 Tan-Chr1:9138788 7.00E-156 dispersed
Tan01g0945 Tan-Chr1:9138611 Tan01g0946 Tan-Chr1:9138611 1.80E-156 tandem
Tan01g0946 Tan-Chr1:9138611 Tan01g0947 Tan-Chr1:9138611 3.70E-133 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan01g0946 - - - 0.0