Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Tan01g0947 | ATGGGGCTGCGTTTTTTGTCATACCCACAGAGGAATTTGCTGATGAAGTTCTCATCTCTGCCCCCAGTAACTGCAATTGCCAGCTTCAAAAATGTCAAAGGGGCTTTCCCTTACAGGCGTGTTAGTTGTCAATTGAACTTGGATGATTCCAGCAGCAAGAACAGCCAGATGGAAAGAGTTTACTCCACCATTTCAAATGGGAAATTTAGCAATAAAGAGTTTATTAGTGTTGACTCGCGGCTTTATGAGTATATTCTCTCCAATGTTCGAGAGCCTGAGATCCTGGGGCAACTTCGCGAGGAGACCGCCTCATTGCGTGGTAGCAAAATGCAGGTATCTCCTGATCAAGCACAACTTCTTGCAATGCTTGTTCAGATTCTTGGTGCAAAGCGGTGCATTGAAGTGGGTGTTTACACTGGATATTCGTCCTTAGCTGTTGCACTTGTCCTTCCAGAGTCAGGGCGTTTAGTTGCCTGTGAAAGAGATGCCATATATCTCGAGGTTGCTAAAAGATATTATGAACTTGCTGGTGTTTCACACAAAGTGGATGTGAGACTTGGGCTTGCAGCAGATACACTCAAATCACTTATTGCAAATGGTGAAGCTTGCAGCTATGACTTTGCCTTCATCGATGCTGAGAAGAGGATGAATGAGGAATACTTCGAACTGCTACTGCAACTGGTGAGGGTTGGAGGTTTAATTGTGATTGACAATGTCCTTTGGTACGGAAAAGTAGCTGACTCGACGGTGCGTTAG | 756 | 44.84 | MGLRFLSYPQRNLLMKFSSLPPVTAIASFKNVKGAFPYRRVSCQLNLDDSSSKNSQMERVYSTISNGKFSNKEFISVDSRLYEYILSNVREPEILGQLREETASLRGSKMQVSPDQAQLLAMLVQILGAKRCIEVGVYTGYSSLAVALVLPESGRLVACERDAIYLEVAKRYYELAGVSHKVDVRLGLAADTLKSLIANGEACSYDFAFIDAEKRMNEEYFELLLQLVRVGGLIVIDNVLWYGKVADSTVR | 251 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 1 | 9138611 | 9144016 | + | Tan0000906.4 | Tan01g0947 | 738371 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Tan01g0947 | 251 | Pfam | O-methyltransferase | 89 | 247 | IPR002935 | GO:0008171(InterPro) | |
| Tan01g0947 | 251 | ProSiteProfiles | SAM-dependent O-methyltransferase class I-type profile. | 71 | 251 | IPR002935 | GO:0008171(InterPro) | |
| Tan01g0947 | 251 | CDD | AdoMet_MTases | 131 | 236 | - | - | |
| Tan01g0947 | 251 | Gene3D | Vaccinia Virus protein VP39 | 62 | 251 | IPR029063 | - | |
| Tan01g0947 | 251 | SUPERFAMILY | S-adenosyl-L-methionine-dependent methyltransferases | 82 | 247 | IPR029063 | - | |
| Tan01g0947 | 251 | PANTHER | O-METHYLTRANSFERASE-RELATED | 75 | 248 | IPR050362 | GO:0008757(PANTHER) |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Tan01g0947 | Tan-Chr1:9138611 | Tan04g0054 | Tan-Chr4:483406 | 2.70E-28 | dispersed | |
| Tan01g0946 | Tan-Chr1:9138611 | Tan01g0947 | Tan-Chr1:9138611 | 3.70E-133 | tandem | |
| Tan01g0947 | Tan-Chr1:9138611 | Tan01g0948 | Tan-Chr1:9138788 | 1.00E-136 | tandem |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Tan01g0947 | - | - | - | 0.0 |