Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Tan01g0947 ATGGGGCTGCGTTTTTTGTCATACCCACAGAGGAATTTGCTGATGAAGTTCTCATCTCTGCCCCCAGTAACTGCAATTGCCAGCTTCAAAAATGTCAAAGGGGCTTTCCCTTACAGGCGTGTTAGTTGTCAATTGAACTTGGATGATTCCAGCAGCAAGAACAGCCAGATGGAAAGAGTTTACTCCACCATTTCAAATGGGAAATTTAGCAATAAAGAGTTTATTAGTGTTGACTCGCGGCTTTATGAGTATATTCTCTCCAATGTTCGAGAGCCTGAGATCCTGGGGCAACTTCGCGAGGAGACCGCCTCATTGCGTGGTAGCAAAATGCAGGTATCTCCTGATCAAGCACAACTTCTTGCAATGCTTGTTCAGATTCTTGGTGCAAAGCGGTGCATTGAAGTGGGTGTTTACACTGGATATTCGTCCTTAGCTGTTGCACTTGTCCTTCCAGAGTCAGGGCGTTTAGTTGCCTGTGAAAGAGATGCCATATATCTCGAGGTTGCTAAAAGATATTATGAACTTGCTGGTGTTTCACACAAAGTGGATGTGAGACTTGGGCTTGCAGCAGATACACTCAAATCACTTATTGCAAATGGTGAAGCTTGCAGCTATGACTTTGCCTTCATCGATGCTGAGAAGAGGATGAATGAGGAATACTTCGAACTGCTACTGCAACTGGTGAGGGTTGGAGGTTTAATTGTGATTGACAATGTCCTTTGGTACGGAAAAGTAGCTGACTCGACGGTGCGTTAG 756 44.84 MGLRFLSYPQRNLLMKFSSLPPVTAIASFKNVKGAFPYRRVSCQLNLDDSSSKNSQMERVYSTISNGKFSNKEFISVDSRLYEYILSNVREPEILGQLREETASLRGSKMQVSPDQAQLLAMLVQILGAKRCIEVGVYTGYSSLAVALVLPESGRLVACERDAIYLEVAKRYYELAGVSHKVDVRLGLAADTLKSLIANGEACSYDFAFIDAEKRMNEEYFELLLQLVRVGGLIVIDNVLWYGKVADSTVR 251
       

Gff information


Chromosome Start End Strand Old_gene Gene Num
1 9138611 9144016 + Tan0000906.4 Tan01g0947 738371
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Tan01g0947 251 Pfam O-methyltransferase 89 247 IPR002935 GO:0008171(InterPro)
Tan01g0947 251 ProSiteProfiles SAM-dependent O-methyltransferase class I-type profile. 71 251 IPR002935 GO:0008171(InterPro)
Tan01g0947 251 CDD AdoMet_MTases 131 236 - -
Tan01g0947 251 Gene3D Vaccinia Virus protein VP39 62 251 IPR029063 -
Tan01g0947 251 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 82 247 IPR029063 -
Tan01g0947 251 PANTHER O-METHYLTRANSFERASE-RELATED 75 248 IPR050362 GO:0008757(PANTHER)
       

Duplication type information


Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan01g0947 Tan-Chr1:9138611 Tan04g0054 Tan-Chr4:483406 2.70E-28 dispersed
Tan01g0946 Tan-Chr1:9138611 Tan01g0947 Tan-Chr1:9138611 3.70E-133 tandem
Tan01g0947 Tan-Chr1:9138611 Tan01g0948 Tan-Chr1:9138788 1.00E-136 tandem
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan01g0947 - - - 0.0