Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan01g0952 ATGGGGGAGGAAGTGAAATTGTTGGATTTTTGGCCGAGCATGTTCGGGATGCGAGTTAGAATAGCCTTGGCCGAGAAAGGCGTGGCGTACGAATATGTGGAGGAAGATTTGACGAAGAAAAGCCCTTTGCTTCTGCAGATGAATCCAATTAACAAGCAGATCCCTGTTCTTGTTCATAATGGAAAACCCATCTGTGAATCTTCCATTATCGTTCAGTATATCGATGAAGTTTGGAATGACAAAGCTCCTCCTCTGTTGCCGTCTGATCCTTACCACAGAGCTCAGGCCAGGTTTTGGGTCGATTTCATCGACAAGAAGCTTTATGTTGCTACGAGGAAGATATGGGCCAGCAAGGGAGAGGAACATGAGGGAGGGAAGAAGGAGGTGATAGAAATTTTGAAGAAACTGGAAGAATTTCTTGGAGATAAGGATTACTTTGGAGGTGATTGTTTGGGATTTGTGGACATTGCTTTAATTGGTTATTACCCATGGTTTTACAGCTACGAAATCATTGGGAACTTCAGCTTTGAGGCTGAGTGTCCCAAGACAATAGCTTGGGCCAAGAGGTGCTTGCAAAAGGACAGTGTTTCAAAGTCCTTGGTTGATTCCAAGAAGGTTTATGACTTTGTGCTTCAATTGAAGACACGTCTTGGGACTTGA 660 43.94 MGEEVKLLDFWPSMFGMRVRIALAEKGVAYEYVEEDLTKKSPLLLQMNPINKQIPVLVHNGKPICESSIIVQYIDEVWNDKAPPLLPSDPYHRAQARFWVDFIDKKLYVATRKIWASKGEEHEGGKKEVIEILKKLEEFLGDKDYFGGDCLGFVDIALIGYYPWFYSYEIIGNFSFEAECPKTIAWAKRCLQKDSVSKSLVDSKKVYDFVLQLKTRLGT 219
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 9194078 9196238 + Tan0020069.1 Tan01g0952 738376
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan01g0952 219 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 89 217 IPR010987 -
Tan01g0952 219 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 3 82 IPR004045 -
Tan01g0952 219 Gene3D - 89 219 - -
Tan01g0952 219 FunFam Tau class glutathione S-transferase 1 86 - -
Tan01g0952 219 SUPERFAMILY Thioredoxin-like 5 108 IPR036249 -
Tan01g0952 219 Pfam Glutathione S-transferase, N-terminal domain 4 76 IPR004045 -
Tan01g0952 219 SFLD Main (cytGST) 2 217 - -
Tan01g0952 219 SFLD Main.3: Omega- and Tau-like 2 217 IPR045073 -
Tan01g0952 219 FunFam Glutathione S-transferase U20 89 219 - -
Tan01g0952 219 Gene3D Glutaredoxin 1 88 - -
Tan01g0952 219 CDD GST_N_Tau 5 78 - -
Tan01g0952 219 CDD GST_C_Tau 90 213 IPR045074 GO:0004364(InterPro)|GO:0006749(InterPro)
Tan01g0952 219 Pfam Glutathione S-transferase, C-terminal domain 118 192 IPR004046 -
Tan01g0952 219 PANTHER GLUTATHIONE S-TRANSFERASE, GST, SUPERFAMILY, GST DOMAIN CONTAINING 4 210 IPR045073 GO:0004364(PANTHER)|GO:0005737(PANTHER)|GO:0006749(PANTHER)
Tan01g0952 219 SUPERFAMILY GST C-terminal domain-like 76 215 IPR036282 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan01g0952 Tan-Chr1:9194078 Tan11g1445 Tan-Chr11:12988347 2.40E-65 dispersed
Tan01g0952 Tan-Chr1:9194078 Tan05g2447 Tan-Chr5:75636988 1.40E-36 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan01g0952 K00799 - csv:101218562 341.658