Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Tan01g0952 | ATGGGGGAGGAAGTGAAATTGTTGGATTTTTGGCCGAGCATGTTCGGGATGCGAGTTAGAATAGCCTTGGCCGAGAAAGGCGTGGCGTACGAATATGTGGAGGAAGATTTGACGAAGAAAAGCCCTTTGCTTCTGCAGATGAATCCAATTAACAAGCAGATCCCTGTTCTTGTTCATAATGGAAAACCCATCTGTGAATCTTCCATTATCGTTCAGTATATCGATGAAGTTTGGAATGACAAAGCTCCTCCTCTGTTGCCGTCTGATCCTTACCACAGAGCTCAGGCCAGGTTTTGGGTCGATTTCATCGACAAGAAGCTTTATGTTGCTACGAGGAAGATATGGGCCAGCAAGGGAGAGGAACATGAGGGAGGGAAGAAGGAGGTGATAGAAATTTTGAAGAAACTGGAAGAATTTCTTGGAGATAAGGATTACTTTGGAGGTGATTGTTTGGGATTTGTGGACATTGCTTTAATTGGTTATTACCCATGGTTTTACAGCTACGAAATCATTGGGAACTTCAGCTTTGAGGCTGAGTGTCCCAAGACAATAGCTTGGGCCAAGAGGTGCTTGCAAAAGGACAGTGTTTCAAAGTCCTTGGTTGATTCCAAGAAGGTTTATGACTTTGTGCTTCAATTGAAGACACGTCTTGGGACTTGA | 660 | 43.94 | MGEEVKLLDFWPSMFGMRVRIALAEKGVAYEYVEEDLTKKSPLLLQMNPINKQIPVLVHNGKPICESSIIVQYIDEVWNDKAPPLLPSDPYHRAQARFWVDFIDKKLYVATRKIWASKGEEHEGGKKEVIEILKKLEEFLGDKDYFGGDCLGFVDIALIGYYPWFYSYEIIGNFSFEAECPKTIAWAKRCLQKDSVSKSLVDSKKVYDFVLQLKTRLGT | 219 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
1 | 9194078 | 9196238 | + | Tan0020069.1 | Tan01g0952 | 738376 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Tan01g0952 | 219 | ProSiteProfiles | Soluble glutathione S-transferase C-terminal domain profile. | 89 | 217 | IPR010987 | - | |
Tan01g0952 | 219 | ProSiteProfiles | Soluble glutathione S-transferase N-terminal domain profile. | 3 | 82 | IPR004045 | - | |
Tan01g0952 | 219 | Gene3D | - | 89 | 219 | - | - | |
Tan01g0952 | 219 | FunFam | Tau class glutathione S-transferase | 1 | 86 | - | - | |
Tan01g0952 | 219 | SUPERFAMILY | Thioredoxin-like | 5 | 108 | IPR036249 | - | |
Tan01g0952 | 219 | Pfam | Glutathione S-transferase, N-terminal domain | 4 | 76 | IPR004045 | - | |
Tan01g0952 | 219 | SFLD | Main (cytGST) | 2 | 217 | - | - | |
Tan01g0952 | 219 | SFLD | Main.3: Omega- and Tau-like | 2 | 217 | IPR045073 | - | |
Tan01g0952 | 219 | FunFam | Glutathione S-transferase U20 | 89 | 219 | - | - | |
Tan01g0952 | 219 | Gene3D | Glutaredoxin | 1 | 88 | - | - | |
Tan01g0952 | 219 | CDD | GST_N_Tau | 5 | 78 | - | - | |
Tan01g0952 | 219 | CDD | GST_C_Tau | 90 | 213 | IPR045074 | GO:0004364(InterPro)|GO:0006749(InterPro) | |
Tan01g0952 | 219 | Pfam | Glutathione S-transferase, C-terminal domain | 118 | 192 | IPR004046 | - | |
Tan01g0952 | 219 | PANTHER | GLUTATHIONE S-TRANSFERASE, GST, SUPERFAMILY, GST DOMAIN CONTAINING | 4 | 210 | IPR045073 | GO:0004364(PANTHER)|GO:0005737(PANTHER)|GO:0006749(PANTHER) | |
Tan01g0952 | 219 | SUPERFAMILY | GST C-terminal domain-like | 76 | 215 | IPR036282 | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Tan01g0952 | Tan-Chr1:9194078 | Tan11g1445 | Tan-Chr11:12988347 | 2.40E-65 | dispersed | |
Tan01g0952 | Tan-Chr1:9194078 | Tan05g2447 | Tan-Chr5:75636988 | 1.40E-36 | transposed |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Tan01g0952 | K00799 | - | csv:101218562 | 341.658 |